Christopher T. Lee

15 papers Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Author Correction: Spatial modeling algorithms for reactions and transport in biological cells.
Nat. Comput. Sci.
Emmet A. Francis, Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2025 J jnl
Spatial modeling algorithms for reactions and transport in biological cells.
Nat. Comput. Sci.
Emmet A. Francis, Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2023 J jnl
SMART: Spatial Modeling Algorithms for Reactions and Transport.
J. Open Source Softw.
Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Emmet A. Francis, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2022 J jnl
Benchmarking ensemble docking methods in D3R Grand Challenge 4.
J. Comput. Aided Mol. Des.
Jessie Low Gan, Dhruv Kumar, Cynthia Chen, Bryn C. Taylor, Benjamin R. Jagger, Rommie E. Amaro, Christopher T. Lee
2021 J jnl
Mem3DG: Modeling Membrane Mechanochemical Dynamics in 3D using Discrete Differential Geometry.
CoRR
Cuncheng Zhu, Christopher T. Lee, Padmini Rangamani
2021 J jnl
SamQL: a structured query language and filtering tool for the SAM/BAM file format.
BMC Bioinform.
Christopher T. Lee, Manolis Maragkakis
2020 J jnl
3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries.
PLoS Comput. Biol.
Christopher T. Lee, Justin G. Laughlin, Nils Angliviel de La Beaumelle, Rommie E. Amaro, James Andrew McCammon, Ravi Ramamoorthi, Michael J. Holst, Padmini Rangamani
2019 — —
Forging Pathways to Enable Multiscale Modeling of Cellular Scale Phenomena
Christopher T. Lee
2019 J jnl
The Implementation of the Colored Abstract Simplicial Complex and Its Application to Mesh Generation.
ACM Trans. Math. Softw.
Christopher T. Lee, John B. Moody, Rommie E. Amaro, James Andrew McCammon, Michael J. Holst
2018 J jnl
Exascale Computing: A New Dawn for Computational Biology.
Comput. Sci. Eng.
Christopher T. Lee, Rommie E. Amaro
2018 J jnl
The Implementation of the Colored Abstract Simplicial Complex and its Application to Mesh Generation.
CoRR
Christopher T. Lee, John B. Moody, Rommie E. Amaro, James Andrew McCammon, Michael J. Holst
2016 J jnl
Simulation-Based Approaches for Determining Membrane Permeability of Small Compounds.
J. Chem. Inf. Model.
Christopher T. Lee, Jeffrey Comer, Conner Herndon, Nelson Leung, Anna Pavlova, Robert V. Swift, Chris Tung, Christopher N. Rowley, Rommie E. Amaro, Christophe Chipot, Yi Wang, James C. Gumbart
2015 — conf
Anatomy-specific classification of medical images using deep convolutional nets.
ISBI
Holger R. Roth, Christopher T. Lee, Hoo-Chang Shin, Ari Seff, Lauren Kim, Jianhua Yao, Le Lu, Ronald M. Summers
2015 J jnl
Anatomy-specific classification of medical images using deep convolutional nets.
CoRR
Holger R. Roth, Christopher T. Lee, Hoo-Chang Shin, Ari Seff, Lauren Kim, Jianhua Yao, Le Lu, Ronald M. Summers
2003 J jnl
Evaluation of the potential of Hyperion for fire danger assessment by comparison to the Airborne Visible/Infrared Imaging Spectrometer.
IEEE Trans. Geosci. Remote. Sens.
Dar A. Roberts, Philip E. Dennison, Margaret E. Gardner, Yasha Hetzel, Susan L. Ustin, Christopher T. Lee