Christopher Bystroff

14 papers Journal 10Unranked 4
YearRankTypeTitle / Venue / Authors
2024 J jnl
Challenges and Solutions for Leave-One-Out Biosensor Design in the Context of a Rugged Fitness Landscape.
Sensors
Shounak Banerjee, Keith Fraser, Donna E. Crone, Jinal C. Patel, Sarah E. Bondos, Christopher Bystroff
2020 J jnl
Better together: Elements of successful scientific software development in a distributed collaborative community.
PLoS Comput. Biol.
Julia Koehler Leman, Brian D. Weitzner, P. Douglas Renfrew, Steven M. Lewis, Rocco Moretti, Andrew M. Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W. Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William R. Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland L. Dunbrack Jr., Tanja Kortemme, Andrew Leaver-Fay, Charlie E. M. Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J. Gray, Richard Bonneau
2018 J jnl
Fast design of arbitrary length loops in proteins using InteractiveRosetta.
BMC Bioinform.
William F. Hooper, Benjamin D. Walcott, Xing Wang, Christopher Bystroff
2016 J jnl
Protein backbone ensemble generation explores the local structural space of unseen natural homologs.
Bioinform.
Christian D. Schenkelberg, Christopher Bystroff
2015 J jnl
InteractiveROSETTA: a graphical user interface for the PyRosetta protein modeling suite.
Bioinform.
Christian D. Schenkelberg, Christopher Bystroff
2014 J jnl
Improving computational efficiency and tractability of protein design using a piecemeal approach. A strategy for parallel and distributed protein design.
Bioinform.
Derek J. Pitman, Christian D. Schenkelberg, Yao-ming Huang, Frank D. Teets, Daniel J. DiTursi, Christopher Bystroff
2012 — conf
Exploring objective functions and cross-terms in the optimization of an energy function for protein design.
BCB
Yao-ming Huang, Christopher Bystroff
2009 J jnl
Iterative Non-Sequential protein Structural Alignment.
J. Bioinform. Comput. Biol.
Saeed Salem, Mohammed J. Zaki, Christopher Bystroff
2008 J jnl
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure.
BMC Bioinform.
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
2006 J jnl
Improved pairwise alignments of proteins in the Twilight Zone using local structure predictions.
Bioinform.
Yao-ming Huang, Christopher Bystroff
2005 — conf
ECOME: A simple model for an evolving consumption web.
CSB Workshops
Christopher Bystroff, Sam DeLuca, Carl N. McDaniel
2005 — conf
Efficient Sampling of Protein Folding Pathways using HMMSTR and Efficient Sampling of Protein Folding Pathways using HMMSTR and.
CSB Workshops
Yogesh A. Girdhar, Christopher Bystroff, Srinivas Akella
2005 — conf
Improved pairwise alignment of proteins in the Twilight Zone using local structure predictions.
CSB Workshops
Yao-ming Huang, Christopher Bystroff
2005 J jnl
Non-sequential structure-based alignments reveal topology-independent core packing arrangements in proteins.
Bioinform.
Xin Yuan, Christopher Bystroff