Christophe Godin

34 papers A 1B 2Journal 17Unranked 13

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Geometric and mechanical guidance: Role of stigmatic epidermis in early pollen tube pathfinding in arabidopsis. PLoS Comput. Biol. Lucie Riglet, Catherine Quilliet, Christophe Godin, Karin John, Isabelle Fobis-Loisy
2025	J	`jnl`	Learning to Infer Parameterized Representations of Plants from 3D Scans. CoRR Samara Ghrer, Christophe Godin, Stefanie Wuhrer
2025	J	`jnl`	Multi-physics modeling for ion homeostasis in multi-compartment plant cells using an energy function. PLoS Comput. Biol. Guillaume Mestdagh, Alexis De Angeli, Christophe Godin
2023	J	`jnl`	Characterization of random walks on space of unordered trees using efficient metric simulation. CoRR Farah Ben-Naoum, Christophe Godin, Romain Azaïs
2023	J	`jnl`	Characterization of random walks on space of unordered trees using efficient metric simulation. Discret. Appl. Math. Farah Ben-Naoum, Christophe Godin, Romain Azaïs
2022	J	`jnl`	Benchmarking of deep learning algorithms for 3D instance segmentation of confocal image datasets. PLoS Comput. Biol. Anuradha Kar, Manuel Petit, Yassin Refahi, Guillaume Cerutti, Christophe Godin, Jan Traas
2022	—	`conf`	Robust Plant Cell Tracking in Fluorescence Microscopy 3D+T Series. ISBI Manuel Petit, Guillaume Cerutti, Christophe Godin, Grégoire Malandain
2021	J	`jnl`	BVPy: A FEniCS-based Python package to ease the expression and study of boundary value problems in Biology. J. Open Source Softw. Florian Gacon, Christophe Godin, Olivier Ali
2020	—	`conf`	3D Plant Phenotyping: All You Need is Labelled Point Cloud Data. ECCV Workshops (6) Ayan Chaudhury, Frédéric Boudon, Christophe Godin
2019	A	`conf`	Approximation of trees by self-nested trees. ALENEX Romain Azaïs, Jean-Baptiste Durand, Christophe Godin
2019	J	`jnl`	Coupling water fluxes with cell wall mechanics in a multicellular model of plant development. PLoS Comput. Biol. Ibrahim Cheddadi, Michel Génard, Nadia Bertin, Christophe Godin
2018	J	`jnl`	Approximation of trees by self-nested trees. CoRR Romain Azaïs, Jean-Baptiste Durand, Christophe Godin
2017	—	`conf`	Modelling Curvature Effects Using L-Systems: From Discrete and Deterministic to Continuous and Stochastic. TPNC Julia Pulwicki, Christophe Godin
2016	B	`conf`	Lossy Compression of Unordered Rooted Trees. DCC Romain Azaïs, Jean-Baptiste Durand, Christophe Godin
2016	—	`conf`	Spatio-temporal registration of 3D microscopy image sequences of arabidopsis floral meristems. ISBI Gael Michelin, Yassin Refahi, Raymond Wightman, Henrik Jonsson, Jan Traas, Christophe Godin, Grégoire Malandain
2015	—	`conf`	3-d Tessellation of Plant Tissue - A Dual Optimization Approach to Cell-Level Meristem Reconstruction from Microscopy Images. 3DV Guillaume Cerutti, Sophie Ribes, Christophe Godin, Carlos Galvan-Ampudia, Teva Vernoux
2015	J	`jnl`	A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution. PLoS Comput. Biol. Frédéric Boudon, Jérôme Chopard, Olivier Ali, Benjamin Gilles, Olivier Hamant, Arezki Boudaoud, Jan Traas, Christophe Godin
2015	—	`conf`	An Iterative Mesh Optimization Method for 3D Meristem Reconstruction at Cell Level. BIOSTEC (Selected Papers) Guillaume Cerutti, Christophe Godin
2015	—	`conf`	Cell pairings for ascidian embryo registration. ISBI Gael Michelin, Léo Guignard, Ulla-Maj Fiuza, Patrick Lemaire, Christophe Godin, Grégoire Malandain
2015	—	`conf`	Meshing Meristems - An Iterative Mesh Optimization Method for Modeling Plant Tissue at Cell Resolution. BIOIMAGING Guillaume Cerutti, Christophe Godin
2014	—	`conf`	Combining Finite Element Method and L-Systems Using Natural Information Flow Propagation to Simulate Growing Dynamical Systems. TPNC Jean-Philippe Bernard, Benjamin Gilles, Christophe Godin
2014	—	`conf`	Spatio-temporal registration of embryo images. ISBI Léo Guignard, Christophe Godin, Ulla-Maj Fiuza, Lars Hufnagel, Patrick Lemaire, Grégoire Malandain
2011	B	`conf`	A Combinatorial Model of Phyllotaxis Perturbations in CPM Yassin Refahi, Etienne Farcot, Yann Guédon, Fabrice Besnard, Teva Vernoux, Christophe Godin
2010	J	`jnl`	Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants. IEEE ACM Trans. Comput. Biol. Bioinform. Christophe Godin, Pascal Ferraro
2009	—	`conf`	Efficient and robust reconstruction of botanical branching structure from laser scanned points. CAD/Graphics Dong-Ming Yan, Julien Wintz, Bernard Mourrain, Wenping Wang, Frédéric Boudon, Christophe Godin
2009	J	`jnl`	PlantGL: A Python-based geometric library for 3D plant modelling at different scales. Graph. Model. Christophe Pradal, Frédéric Boudon, C. Nouguier, Jérôme Chopard, Christophe Godin
2009	J	`jnl`	Structure from silhouettes: a new paradigm for fast sketch-based design of trees. Comput. Graph. Forum Jamie Wither, Frédéric Boudon, Marie-Paule Cani, Christophe Godin
2008	J	`jnl`	Multiscale Framework for Modeling and Analyzing Light Interception by Trees. Multiscale Model. Simul. David Da Silva, Frédéric Boudon, Christophe Godin, Hervé Sinoquet
2006	—	`conf`	A Critical Appraisal of the Box Counting Method to Assess the Fractal Dimension of Tree Crowns. ISVC (1) David Da Silva, Frédéric Boudon, Christophe Godin, O. Puech, Colin Smith, Hervé Sinoquet
2003	J	`jnl`	An Edit Distance between Quotiented Trees. Algorithmica Pascal Ferraro, Christophe Godin
2003	J	`jnl`	Interactive Design of Bonsai Tree Models. Comput. Graph. Forum Frédéric Boudon, Przemyslaw Prusinkiewicz, Pavol Federl, Christophe Godin, Radoslaw Karwowski
2003	—	`book`	Introduction aux structures multi-échelles. Applications à la représentation des plantes. Christophe Godin
2003	J	`jnl`	Optimal mappings with minimum number of connected components in tree-to-tree comparison problems. J. Algorithms Pascal Ferraro, Christophe Godin
2002	—	`conf`	L-systems and MTGs: Integrating Simulation and Formal Analysis of Architectural Plant Models. ESM Pascal Ferraro, Christophe Godin, Przemyslaw Prusinkiewicz