Christophe Blanchet

33 papers B 2C 2Misc 1Journal 17Unranked 11

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	MassiveFold: unveiling AlphaFold's hidden potential with optimized and parallelized massive sampling. Nat. Comput. Sci. Nessim Raouraoua, Claudio Mirabello, Thibaut Véry, Christophe Blanchet, Björn Wallner, Marc F. Lensink, Guillaume Brysbaert
2024	J	`jnl`	Real-time forecasting of COVID-19-related hospital strain in France using a non-Markovian mechanistic model. PLoS Comput. Biol. Alexander Massey, Corentin Boennec, Claudia Ximena Restrepo-Ortiz, Christophe Blanchet, Samuel Alizon, Mircea Sofonea
2019	J	`jnl`	WellInverter: a web application for the analysis of fluorescent reporter gene data. BMC Bioinform. Yannick Martin, Michel Page, Christophe Blanchet, Hidde de Jong
2018	J	`jnl`	A reusable tree-based web-visualization to browse EDAM ontology, and contribute to it. J. Open Source Softw. Bryan Brancotte, Christophe Blanchet, Hervé Ménager
2017	C	`conf`	CYCLONE: The Multi-cloud Middleware Stack for Application Deployment and Management. CloudCom Mathias Slawik, Christophe Blanchet, Yuri Demchenko, Fatih Turkmen, Alexy Ilyushkin, Cees de Laat, Charles Loomis
2017	J	`jnl`	Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Future Gener. Comput. Syst. Sarah Cohen Boulakia, Khalid Belhajjame, Olivier Collin, Jérôme Chopard, Christine Froidevaux, Alban Gaignard, Konrad Hinsen, Pierre Larmande, Yvan Le Bras, Frédéric Lemoine, Fabien Mareuil, Hervé Ménager, Christophe Pradal, Christophe Blanchet
2016	—	`conf`	An Economical Security Architecture for Multi-cloud Application Deployments in Federated Environments. GECON Mathias Slawik, Begüm Ilke Zilci, Axel Küpper, Yuri Demchenko, Fatih Turkmen, Christophe Blanchet, Jean-François Gibrat
2016	J	`jnl`	CYCLONE Unified Deployment and Management of Federated, Multi-Cloud Applications. CoRR Mathias Slawik, Begüm Ilke Zilci, Yuri Demchenko, José-Ignacio Aznar-Baranda, Robert Branchat, Charles Loomis, Oleg Lodygensky, Christophe Blanchet
2016	—	`conf`	CYCLONE: A Multi-cloud Federation Platform for Complex Bioinformatics and Energy Applications (Short Paper). CloudNet Domenico Gallico, Matteo Biancani, Christophe Blanchet, Mohamed Bedri, Jean-François Gibrat, José-Ignacio Aznar-Baranda, Doris Hacker, Maria Kourkouli
2016	—	`conf`	CYCLONE: A Platform for Data Intensive Scientific Applications in Heterogeneous Multi-cloud/Multi-provider Environment. IC2E Workshops Yuri Demchenko, Christophe Blanchet, Charles Loomis, Robert Branchat, Mathias Slawik, Begüm Ilke Zilci, Mohamed Bedri, Jean-François Gibrat, Oleg Lodygensky, Miroslav Zivkovic, Cees de Laat
2016	—	`conf`	Cloud based big data infrastructure: Architectural components and automated provisioning. HPCS Yuri Demchenko, Fatih Turkmen, Cees de Laat, Christophe Blanchet, Charles Loomis
2015	J	`jnl`	BioShaDock: a community driven bioinformatics shared Docker-based tools registry. F1000Research François Moreews, Olivier Sallou, Hervé Ménager, Yvan Le Bras, Cyril Monjeaud, Christophe Blanchet, Olivier Collin
2015	Misc	`conf`	CYCLONE Unified Deployment and Management of Federated, Multi-cloud Applications. UCC Mathias Slawik, Begüm Ilke Zilci, Yuri Demchenko, José-Ignacio Aznar-Baranda, Robert Branchat, Charles Loomis, Oleg Lodygensky, Christophe Blanchet
2015	J	`jnl`	RSAT 2015: Regulatory Sequence Analysis Tools. Nucleic Acids Res. Alejandra Medina-Rivera, Matthieu Defrance, Olivier Sand, Carl Herrmann, Jaime Abraham Castro-Mondragón, Jeremy Delerce, Sébastien Jaeger, Christophe Blanchet, Pierre Vincens, Christophe Caron, Daniel M. Staines, Bruno Contreras-Moreira, Marie Artufel, Lucie Charbonnier-Khamvongsa, Céline Hernandez, Denis Thieffry, Morgane Thomas-Chollier, Jacques van Helden
2013	—	`conf`	Appliance Management for Federated Cloud Environments. CloudCom (1) Mohammed Airaj, Christophe Blanchet, Stuart Kenny, Charles Loomis
2013	J	`jnl`	Scalable data management for map-reduce-based data-intensive applications: a view for cloud and hybrid infrastructures. Int. J. Cloud Comput. Gabriel Antoniu, Alexandru Costan, Julien Bigot, Frédéric Desprez, Gilles Fedak, Sylvain Gault, Christian Pérez, Anthony Simonet, Bing Tang, Christophe Blanchet, Raphael Terreux, Luc Bougé, François Briant, Franck Cappello, Kate Keahey, Bogdan Nicolae, Frédéric Suter
2011	J	`jnl`	CURVES+ web server for analyzing and visualizing the helical, backbone and groove parameters of nucleic acid structures. Nucleic Acids Res. Christophe Blanchet, Marco Pasi, Krystyna Zakrzewska, Richard Lavery
2011	J	`jnl`	Grid computing for improving conformational sampling in NMR structure calculation. Bioinform. Fabien Mareuil, Christophe Blanchet, Therese E. Malliavin, Michael Nilges
2010	J	`jnl`	BioXSD: the common data-exchange format for everyday bioinformatics web services. Bioinform. Matús Kalas, Pål Puntervoll, Alexandre Joseph, Edita Bartaseviciute, Armin Töpfer, Prabakar Venkataraman, Steve Pettifer, Jan Christian Bryne, Jon C. Ison, Christophe Blanchet, Kristoffer Rapacki, Inge Jonassen
2010	J	`jnl`	The EMBRACE web service collection. Nucleic Acids Res. Steve Pettifer, Jon C. Ison, Matús Kalas, Dave Thorne, Philip McDermott, Inge Jonassen, Ali Liaquat, José María Fernández, José Manuel Rodriguez, David G. Pisano, Christophe Blanchet, Mahmut Uludag, Peter M. Rice, Edita Bartaseviciute, Kristoffer Rapacki, Maarten L. Hekkelman, Olivier Sand, Heinz Stockinger, Andrew B. Clegg, Erik Bongcam-Rudloff, Jean Salzemann, Vincent Breton, Teresa K. Attwood, Graham Cameron, Gert Vriend
2010	C	`conf`	Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron
2006	B	`conf`	Building an Encrypted File System on the EGEE grid: Application to Protein Sequence Analysis. ARES Christophe Blanchet, Rémi Mollon, Gilbert Deléage
2006	—	`conf`	GPS@ Bioinformatics Portal: from Network to EGEE Grid. HealthGrid Christophe Blanchet, Vincent Lefort, Christophe Combet, Gilbert Deléage
2006	—	`conf`	Grid Deployment of Legacy Bioinformatics Applications with Transparent Data Access. GRID Christophe Blanchet, Rémi Mollon, Douglas Thain, Gilbert Deléage
2006	B	`conf`	Integrating Bioinformatics Resources on the EGEE Grid Platform. CCGRID Christophe Blanchet, Christophe Combet, Gilbert Deléage
2006	—	`conf`	Secured Distributed Service to manage Biological Data on EGEE grid. HealthGrid Christophe Blanchet, Rémi Mollon, Gilbert Deléage
2006	—	`conf`	Web Services Interface to Run Protein Sequence Tools on Grid, Testcase of Protein Sequence Alignment. ISBMDA Christophe Blanchet, Christophe Combet, Vladimir Daric, Gilbert Deléage
2005	—	`conf`	Simultaneous Scheduling of Replication and Computation for Bioinformatic Applications on the Grid. ISBMDA Frederic Desprez, Antoine Vernois, Christophe Blanchet
2004	—	`conf`	Grid Technology for Biomedical Applications. VECPAR Vincent Breton, Christophe Blanchet, Yannick Legré, Lydia Maigne, Johan Montagnat
2004	J	`jnl`	Grid as a bioinformatic tool. Parallel Comput. Nicolas Jacq, Christophe Blanchet, Christophe Combet, Emmanuel Cornillot, Laurent Duret, Ken-ichi Kurata, Hiroshi Nakamura, T. Silvestre, Vincent Breton
2003	J	`jnl`	Integrated databanks access and sequence/structure analysis services at the PBIL. Nucleic Acids Res. Guy Perrière, Christophe Combet, Simon Penel, Christophe Blanchet, Jean Thioulouse, Christophe Geourjon, Julien Grassot, Céline Charavay, Manolo Gouy, Laurent Duret, Gilbert Deléage
2001	J	`jnl`	ANTHEPROT: An integrated protein sequence analysis software with client/server capabilities. Comput. Biol. Medicine Gilbert Deléage, Christophe Combet, Christophe Blanchet, Christophe Geourjon
2000	J	`jnl`	MPSA: integrated system for multiple protein sequence analysis with client/server capabilities. Bioinform. Christophe Blanchet, Christophe Combet, Christophe Geourjon, Gilbert Deléage