Christoph Dieterich

42 papers C 3Journal 25Unranked 14

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Arbitrary Data as Images: Fusion of Patient Data Across Modalities and Irregular Intervals with Vision Transformers. CoRR Malte Tölle, Mohamad Scharaf, Samantha Fischer, Christoph Reich, Silav Zeid, Christoph Dieterich, Benjamin Meder, Norbert Frey, Philipp Wild, Sandy Engelhardt
2025	—	`conf`	ECG Synthesis and Utility Analysis - A Diffusion Model Based Approach. GMDS Sanketa Hegde, Merten Prüser, Nikola Cenic, Anatol Bollinger, Marie Arens, Jan Köhlen, Eimo Martens, Christoph Dieterich
2025	—	`conf`	GeMTeX's De-Identification in Action: Lessons Learned & Devil's Details. GMDS Christina Lohr, Jakob Faller, Andrea Riedel, Hung Manh Nguyen, Markus Wolfien, Justin Hofenbitzer, Luise Modersohn, Jutta Romberg, Fabian Prasser, Jazia Omeirat, Yutong Wen, Oksana Galusch, Udo Hahn, Marvin Seiferling, Christoph Dieterich, Peter Klügl, Franz Matthies, Janina Kind, Martin Boeker, Markus Löffler, Frank A. Meineke
2025	J	`jnl`	Medication information extraction using local large language models. J. Biomed. Informatics Phillip Richter-Pechanski, Marvin Seiferling, Christina Kiriakou, Dominic M. Schwab, Nicolas A. Geis, Christoph Dieterich, Anette Frank
2025	J	`jnl`	Ψ-co-mAFiA: concurrent detection of pseudouridine and m6A in single RNA molecules. Bioinform. Adrian Chan, Isabel S. Naarmann-de Vries, Christoph Dieterich
2024	J	`jnl`	Clinical information extraction for Low-resource languages with Few-shot learning using Pre-trained language models and Prompting. CoRR Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab, Christina Kiriakou, Nicolas Geis, Christoph Dieterich, Anette Frank
2024	J	`jnl`	Transverse aortic constriction multi-omics analysis uncovers pathophysiological cardiac molecular mechanisms. Database J. Biol. Databases Curation Enio Gjerga, Matthias Dewenter, Thiago Britto-Borges, Johannes Grosso, Frank Stein, Jessica Eschenbach, Mandy Rettel, Johannes Backs, Christoph Dieterich
2023	J	`jnl`	Characterizing alternative splicing effects on protein interaction networks with LINDA. Bioinform. Enio Gjerga, Isabel S. Naarmann-de Vries, Christoph Dieterich
2023	—	`conf`	Few-Shot and Prompt Training for Text Classification in German Doctor's Letters. MIE Phillip Richter-Pechanski, Philipp Wiesenbach, Dominic M. Schwab, Christina Kiriakou, Mingyang He, Nicolas A. Geis, Anette Frank, Christoph Dieterich
2023	—	`conf`	Herding Cats in Pandemic Times - Towards Technological and Organizational Convergence of Heterogeneous Solutions for Investigating and Mastering the Pandemic in University Medical Centers. MedInfo Dagmar Krefting, Nico T. Mutters, Rüdiger Pryss, Martin Sedlmayr, Martin Boeker, Christoph Dieterich, Carolin Koll, Martina Mueller, Anna Slagman, Dagmar Waltemath, Antje Wulff, Sven Zenker
2023	—	`conf`	Insights into the FAIRness of the German Network University Medicine: A Survey. MIE Lea Michaelis, Rasim Atakan Poyraz, Michael Rusongoza Muzoora, Kerstin Gierend, Alexander Bartschke, Christoph Dieterich, Tim Johann, Dagmar Krefting, Dagmar Waltemath, Sylvia Thun
2021	J	`jnl`	A comparison of metabolic labeling and statistical methods to infer genome-wide dynamics of RNA turnover. Briefings Bioinform. Etienne Boileau, Janine Altmüller, Isabel S. Naarmann-de Vries, Christoph Dieterich
2021	—	`conf`	An Apple Watch Dashboard for HiGHmed Heart Insufficency Patients. GMDS Magdalena Smieszek, Aljoscha Kindermann, Ali Amr, Benjamin Meder, Christoph Dieterich
2020	—	`conf`	Preliminary Analysis of Structured Reporting in the HiGHmed Use Case Cardiology: Challenges and Measures. GMDS Aljoscha Kindermann, Erik Tute, Sebastian Benda, Martin Löpprich, Phillip Richter-Pechanski, Christoph Dieterich
2019	—	`conf`	Deep Learning Approaches Outperform Conventional Strategies in De-Identification of German Medical Reports. GMDS Phillip Richter-Pechanski, Ali Amr, Hugo A. Katus, Christoph Dieterich
2019	—	`conf`	MedEx - Data Analytics for Medical Domain Experts in Real-Time. GMDS Aljoscha Kindermann, Ekaterina Stepanova, Hauke Hund, Nicolas Geis, Brandon Malone, Christoph Dieterich
2019	J	`jnl`	On the optimal design of metabolic RNA labeling experiments. PLoS Comput. Biol. Alexey Uvarovskii, Isabel S. Naarmann-de Vries, Christoph Dieterich
2019	J	`jnl`	circtools - a one-stop software solution for circular RNA research. Bioinform. Tobias Jakobi, Alexey Uvarovskii, Christoph Dieterich
2018	—	`conf`	De-Identification of German Medical Admission Notes. GMDS Phillip Richter-Pechanski, Stefan Riezler, Christoph Dieterich
2017	J	`jnl`	Flexbar 3.0 - SIMD and multicore parallelization. Bioinform. Johannes T. Roehr, Christoph Dieterich, Knut Reinert
2017	J	`jnl`	JACUSA: site-specific identification of RNA editing events from replicate sequencing data. BMC Bioinform. Michael Piechotta, Emanuel Wyler, Uwe Ohler, Markus Landthaler, Christoph Dieterich
2017	J	`jnl`	pulseR: Versatile computational analysis of RNA turnover from metabolic labeling experiments. Bioinform. Alexey Uvarovskii, Christoph Dieterich
2016	J	`jnl`	Profiling and Validation of the Circular RNA Repertoire in Adult Murine Hearts. Genom. Proteom. Bioinform. Tobias Jakobi, Lisa F. Czaja-Hasse, Richard Reinhardt, Christoph Dieterich
2016	J	`jnl`	Specific identification and quantification of circular RNAs from sequencing data. Bioinform. Jun Cheng, Franziska Metge, Christoph Dieterich
2015	J	`jnl`	DoRiNA 2.0 - upgrading the doRiNA database of RNA interactions in post-transcriptional regulation. Nucleic Acids Res. Kai Blin, Christoph Dieterich, Ricardo Wurmus, Nikolaus Rajewsky, Markus Landthaler, Altuna Akalin
2014	J	`jnl`	Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications. Bioinform. Eduardo G. Gusmão, Christoph Dieterich, Martin Zenke, Ivan G. Costa
2013	J	`jnl`	ACCUSA2: multi-purpose SNV calling enhanced by probabilistic integration of quality scores. Bioinform. Michael Piechotta, Christoph Dieterich
2012	—	`conf`	Prediction of Transcription Factor Binding Sites by Integrating DNase Digestion and Histone Modification. BSB Eduardo G. Gusmão, Christoph Dieterich, Ivan G. Costa
2012	J	`jnl`	doRiNA: a database of RNA interactions in post-transcriptional regulation. Nucleic Acids Res. Gerd Anders, Sebastian D. Mackowiak, Marvin Jens, Jonas Maaskola, Andreas Kuntzagk, Nikolaus Rajewsky, Markus Landthaler, Christoph Dieterich
2010	J	`jnl`	ACCUSA - accurate SNP calling on draft genomes. Bioinform. Sebastian Fröhler, Christoph Dieterich
2008	J	`jnl`	Syntenator: Multiple gene order alignments with a gene-specific scoring function. Algorithms Mol. Biol. Christian Rödelsperger, Christoph Dieterich
2007	J	`jnl`	Developments in CORG: a gene-centric comparative genomics resource. Nucleic Acids Res. Christoph Dieterich, M. W. Franz, Martin Vingron
2007	J	`jnl`	Pristionchus.org: a genome-centric database of the nematode satellite species Nucleic Acids Res. Christoph Dieterich, Waltraud Roeseler, Patrick Sobetzko, Ralf J. Sommer
2007	—	`conf`	Two Graph-based Approaches for Finding Cross-species Conserved Gene Orders. German Conference on Bioinformatics Christian Rödelsperger, Christoph Dieterich
2005	J	`jnl`	Ab initio identification of putative human transcription factor binding sites by comparative genomics. BMC Bioinform. Davide Corà, Carl Herrmann, Christoph Dieterich, Ferdinando Di Cunto, Paolo Provero, Michele Caselle
2005	J	`jnl`	SITEBLAST-rapid and sensitive local alignment of genomic sequences employing motif anchors. Bioinform. Morris Michael, Christoph Dieterich, Martin Vingron
2004	—	`conf`	Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome. Regulatory Genomics Thomas Manke, Christoph Dieterich, Martin Vingron
2004	—	`conf`	Functional inference from non-random distributions of conserved predicted transcription factor binding sites. ISMB/ECCB (Supplement of Bioinformatics) Christoph Dieterich, Sven Rahmann, Martin Vingron
2004	C	`conf`	Suboptimal Local Alignments Across Multiple Scoring Schemes. WABI Morris Michael, Christoph Dieterich, Jens Stoye
2003	J	`jnl`	CORG: a database for COmparative Regulatory Genomics. Nucleic Acids Res. Christoph Dieterich, Haiyan Wang, Katja Rateitschak, Hannes Luz, Martin Vingron
2003	C	`conf`	Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites. ECCB Christoph Dieterich, Ralf Herwig, Martin Vingron
2002	C	`conf`	Annotating regulatory DNA based on man-mouse genomic comparison. ECCB Christoph Dieterich, Brian Cusack, Haiyan Wang, Katja Rateitschak, Antje Krause, Martin Vingron