Christina Kendziorski

12 papers Journal 12
YearRankTypeTitle / Venue / Authors
2024 J jnl
SpatialView: an interactive web application for visualization of multiple samples in spatial transcriptomics experiments.
Bioinform.
Chitrasen Mohanty, Aman Prasad, Lingxin Cheng, Lisa M. Arkin, Bridget E. Shields, Beth Drolet, Christina Kendziorski
2021 J jnl
CHARTS: a web application for characterizing and comparing tumor subpopulations in publicly available single-cell RNA-seq data sets.
BMC Bioinform.
Matthew N. Bernstein, Zijian Ni, Michael Collins, Mark E. Burkard, Christina Kendziorski, Ron M. Stewart
2021 J jnl
Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells.
PLoS Comput. Biol.
Jared Brown, Chris Barry, Matthew T. Schmitz, Cara Argus, Jennifer M. Bolin, Michael P. Schwartz, Amy Van Aartsen, John W. Steill, Scott Swanson, Ron M. Stewart, James A. Thomson, Christina Kendziorski
2021 J jnl
Normalization by distributional resampling of high throughput single-cell RNA-sequencing data.
Bioinform.
Jared Brown, Zijian Ni, Chitrasen Mohanty, Rhonda Bacher, Christina Kendziorski
2019 J jnl
Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics.
PLoS Comput. Biol.
Chris Barry, Matthew T. Schmitz, Cara Argus, Jennifer M. Bolin, Mitchell D. Probasco, Ning Leng, Bret Duffin, John W. Steill, Scott Swanson, Brian E. McIntosh, Ron M. Stewart, Christina Kendziorski, James A. Thomson, Rhonda Bacher
2016 J jnl
OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data.
Bioinform.
Ning Leng, Jeea Choi, Li-Fang Chu, James A. Thomson, Christina Kendziorski, Ron M. Stewart
2015 J jnl
EBSeq-HMM: a Bayesian approach for identifying gene-expression changes in ordered RNA-seq experiments.
Bioinform.
Ning Leng, Yuan Li, Brian E. McIntosh, Bao Kim Nguyen, Bret Duffin, Shulan Tian, James A. Thomson, Colin N. Dewey, Ron M. Stewart, Christina Kendziorski
2015 J jnl
MADGiC: a model-based approach for identifying driver genes in cancer.
Bioinform.
Keegan D. Korthauer, Christina Kendziorski
2013 J jnl
EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments.
Bioinform.
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M. G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, Christina Kendziorski
2013 J jnl
EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments.
Bioinform.
Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M. G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, Christina Kendziorski
2012 J jnl
R/EBcoexpress: an empirical Bayesian framework for discovering differential co-expression.
Bioinform.
John A. Dawson, Shuyun Ye, Christina Kendziorski
2009 J jnl
Statistical methods for gene set co-expression analysis.
Bioinform.
YounJeong Choi, Christina Kendziorski