Christina Backes

36 papers Journal 35
YearRankTypeTitle / Venue / Authors
2021 J jnl
miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale.
Nucleic Acids Res.
Tobias Fehlmann, Fabian Kern, Omar Laham, Christina Backes, Jeffrey Solomon, Pascal Hirsch, Carsten Volz, Rolf Müller, Andreas Keller
2020 J jnl
What's the target: understanding two decades of in silico microRNA-target prediction.
Briefings Bioinform.
Fabian Kern, Christina Backes, Pascal Hirsch, Tobias Fehlmann, Martin Hart, Eckart Meese, Andreas Keller
2020 J jnl
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems.
Nucleic Acids Res.
Fabian Kern, Tobias Fehlmann, Jeffrey Solomon, Louisa Schwed, Nadja Liddy Grammes, Christina Backes, Kendall Van Keuren-Jensen, David W. Craig, Eckart Meese, Andreas Keller
2020 J jnl
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database.
Nucleic Acids Res.
Tim Kehl, Fabian Kern, Christina Backes, Tobias Fehlmann, Daniel Stöckel, Eckart Meese, Hans-Peter Lenhof, Andreas Keller
2020 J jnl
miRSwitch: detecting microRNA arm shift and switch events.
Nucleic Acids Res.
Fabian Kern, Jérémy Amand, Ilya Senatorov, Alina Isakova, Christina Backes, Eckart Meese, Andreas Keller, Tobias Fehlmann
2019 J jnl
A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites.
Briefings Bioinform.
Tobias Fehlmann, Shashwat Sahay, Andreas Keller, Christina Backes
2019 J jnl
ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification.
Bioinform.
Lara Schneider, Tim Kehl, Kristina Thedinga, Nadja Liddy Grammes, Christina Backes, Christopher Mohr, Benjamin Schubert, Kerstin Lenhof, Nico Gerstner, Andreas Daniel Hartkopf, Markus Wallwiener, Oliver Kohlbacher, Andreas Keller, Eckart Meese, Norbert M. Graf, Hans-Peter Lenhof
2019 J jnl
DynaVenn: web-based computation of the most significant overlap between ordered sets.
BMC Bioinform.
Jérémy Amand, Tobias Fehlmann, Christina Backes, Andreas Keller
2019 J jnl
Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11, 087 Clinical Isolates.
Genom. Proteom. Bioinform.
Valentina Galata, Cedric Christian Laczny, Christina Backes, Georg Hemmrich-Stanisak, Susanne Schmolke, Andre Franke, Eckart Meese, Mathias Herrmann, Lutz von Müller, Achim Plum, Rolf Müller, Cord Stähler, Andreas E. Posch, Andreas Keller
2019 J jnl
Machine Learning to Detect Alzheimer's Disease from Circulating Non-coding RNAs.
Genom. Proteom. Bioinform.
Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Manfred Gogol, Walter Maetzler, Stephanie Deutscher, Simone Gurlit, Claudia Schulte, Anna-Katharina von Thaler, Christian Deuschle, Florian G. Metzger, Daniela Berg, Ulrike Suenkel, Verena Keller, Christina Backes, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2019 J jnl
PLSDB: a resource of complete bacterial plasmids.
Nucleic Acids Res.
Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller
2018 J jnl
A high-resolution map of the human small non-coding transcriptome.
Bioinform.
Tobias Fehlmann, Christina Backes, Julia Alles, Ulrike Fischer, Martin Hart, Fabian Kern, Hilde Langseth, Trine Rounge, Sinan Ugur Umu, Mustafa Kahraman, Thomas Laufer, Jan Haas, Cord Staehler, Nicole Ludwig, Matthias Hübenthal, Benjamin Meder, Andre Franke, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2018 J jnl
Comparing genome versus proteome-based identification of clinical bacterial isolates.
Briefings Bioinform.
Valentina Galata, Christina Backes, Cedric Christian Laczny, Georg Hemmrich-Stanisak, Howard Li, Laura Smoot, Andreas E. Posch, Susanne Schmolke, Markus Bischoff, Lutz von Müller, Achim Plum, Andre Franke, Andreas Keller
2018 J jnl
Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development.
Genom. Proteom. Bioinform.
Andreas Keller, Tobias Fehlmann, Nicole Ludwig, Mustafa Kahraman, Thomas Laufer, Christina Backes, Claus Vogelmeier, Caroline Diener, Frank Biertz, Christian Herr, Rudolf A. Jörres, Hans-Peter Lenhof, Eckart Meese, Robert Bals
2018 J jnl
IMOTA: an interactive multi-omics tissue atlas for the analysis of human miRNA-target interactions.
Nucleic Acids Res.
Valeria Palmieri, Christina Backes, Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Eckart Meese, Andreas Keller
2018 J jnl
miRCarta: a central repository for collecting miRNA candidates.
Nucleic Acids Res.
Christina Backes, Tobias Fehlmann, Fabian Kern, Tim Kehl, Hans-Peter Lenhof, Eckart Meese, Andreas Keller
2017 J jnl
BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation.
Nucleic Acids Res.
Cedric Christian Laczny, Christina Kiefer, Valentina Galata, Tobias Fehlmann, Christina Backes, Andreas Keller
2017 J jnl
RegulatorTrail: a web service for the identification of key transcriptional regulators.
Nucleic Acids Res.
Tim Kehl, Lara Schneider, Florian Schmidt, Daniel Stöckel, Nico Gerstner, Christina Backes, Eckart Meese, Andreas Keller, Marcel H. Schulz, Hans-Peter Lenhof
2017 J jnl
miRPathDB: a new dictionary on microRNAs and target pathways.
Nucleic Acids Res.
Christina Backes, Tim Kehl, Daniel Stöckel, Tobias Fehlmann, Lara Schneider, Eckart Meese, Hans-Peter Lenhof, Andreas Keller
2016 J jnl
BALL-SNPgp - from genetic variants toward computational diagnostics.
Bioinform.
Sabine C. Mueller, Christina Backes, Alexander Greß, Nina Baumgarten, Olga V. Kalinina, Andreas Moll, Oliver Kohlbacher, Eckart Meese, Andreas Keller
2016 J jnl
EDISON-WMW: Exact Dynamic Programing Solution of the Wilcoxon-Mann-Whitney Test.
Genom. Proteom. Bioinform.
Alexander Marx, Christina Backes, Eckart Meese, Hans-Peter Lenhof, Andreas Keller
2016 J jnl
Multi-omics enrichment analysis using the GeneTrail2 web service.
Bioinform.
Daniel Stöckel, Tim Kehl, Patrick Trampert, Lara Schneider, Christina Backes, Nicole Ludwig, Andreas Gerasch, Michael Kaufmann, Manfred Gessler, Norbert M. Graf, Eckart Meese, Andreas Keller, Hans-Peter Lenhof
2016 J jnl
miEAA: microRNA enrichment analysis and annotation.
Nucleic Acids Res.
Christina Backes, Qurratulain T. Khaleeq, Eckart Meese, Andreas Keller
2015 J jnl
Pathogenicity prediction of non-synonymous single nucleotide variants in dilated cardiomyopathy.
Briefings Bioinform.
Sabine C. Mueller, Christina Backes, Jan Haas, Hugo A. Katus, Benjamin Meder, Eckart Meese, Andreas Keller
2015 J jnl
Regulatory MicroRNA Networks: Complex Patterns of Target Pathways for Disease-related and Housekeeping MicroRNAs.
Genom. Proteom. Bioinform.
Sachli Zafari, Christina Backes, Petra Leidinger, Eckart Meese, Andreas Keller
2013 J jnl
NetworkTrail - a web service for identifying and visualizing deregulated subnetworks.
Bioinform.
Daniel Stöckel, Oliver Müller, Tim Kehl, Andreas Gerasch, Christina Backes, Alexander Rurainski, Andreas Keller, Michael Kaufmann, Hans-Peter Lenhof
2012 J jnl
Whole miRNome-wide Differential Co-expression of MicroRNAs.
Genom. Proteom. Bioinform.
Cord F. Stähler, Andreas Keller, Petra Leidinger, Christina Backes, Anoop Chandran, Jöerg Wischhusen, Benjamin Meder, Eckart Meese
2012 J jnl
miRTrail - a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases.
BMC Bioinform.
Cedric Laczny, Petra Leidinger, Jan Haas, Nicole Ludwig, Christina Backes, Andreas Gerasch, Michael Kaufmann, Britta Vogel, Hugo A. Katus, Benjamin Meder, Cord Stähler, Eckart Meese, Hans-Peter Lenhof, Andreas Keller
2010 — —
Bioinformatics approaches for cancer research.
Christina Backes
2009 J jnl
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis.
Bioinform.
Andreas Keller, Christina Backes, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Eckart Meese, Hans-Peter Lenhof
2008 J jnl
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments.
BMC Bioinform.
Andreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof
2007 J jnl
BNDB - The Biochemical Network Database.
BMC Bioinform.
Jan Küntzer, Christina Backes, Torsten Blum, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof
2007 J jnl
Computation of significance scores of unweighted Gene Set Enrichment Analyses.
BMC Bioinform.
Andreas Keller, Christina Backes, Hans-Peter Lenhof
2007 J jnl
GeneTrail - advanced gene set enrichment analysis.
Nucleic Acids Res.
Christina Backes, Andreas Keller, Jan Küntzer, Benny Kneissl, Nicole Comtesse, Yasser A. Elnakady, Rolf Müller, Eckart Meese, Hans-Peter Lenhof
2006 J jnl
BN++ - A Biological Information System.
J. Integr. Bioinform.
Jan Küntzer, Torsten Blum, Andreas Gerasch, Christina Backes, Andreas Hildebrandt, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof
2005 J jnl
GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences.
Nucleic Acids Res.
Christina Backes, Jan Küntzer, Hans-Peter Lenhof, Nicole Comtesse, Eckart Meese