Christian Wachinger

186 papers A* 7A 2B 3Journal 100Unranked 66

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Conditional Diffusion for 3D CT Volume Reconstruction from 2D X-rays. CoRR Martin Rath, Morteza Ghahremani, Yitong Li, Ashkan Taghipour, Marcus Makowski, Christian Wachinger
2026	J	`jnl`	Cortex-Grounded Diffusion Models for Brain Image Generation. CoRR Fabian Bongratz, Yitong Li, Sama Elbaroudy, Christian Wachinger
2026	J	`jnl`	Individualized mapping of aberrant cortical thickness via stochastic cortical self-reconstruction. Medical Image Anal. Christian Wachinger, Dennis M. Hedderich, Melissa Thalhammer, Fabian Bongratz
2026	—	`ed.`	Shape in Medical Imaging - International Workshop, ShapeMI 2025, Held in Conjunction with MICCAI 2025, Daejeon, South Korea, September 23, 2025, Proceedings ShapeMI@MICCAI Christian Wachinger, Gijs Luijten, Shireen Y. Elhabian, Karthik Gopinath, Jan Egger
2026	J	`jnl`	Translating MRI to PET through Conditional Diffusion Models with Enhanced Pathology Awareness. CoRR Yitong Li, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2026	J	`jnl`	Translating MRI to PET through conditional diffusion models with enhanced pathology awareness. Medical Image Anal. Yitong Li, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2025	—	`conf`	3D Shape-to-Image Brownian Bridge Diffusion for Brain MRI Synthesis from Cortical Surfaces. IPMI (1) Fabian Bongratz, Yitong Li, Sama Elbaroudy, Christian Wachinger
2025	J	`jnl`	3D Shape-to-Image Brownian Bridge Diffusion for Brain MRI Synthesis from Cortical Surfaces. CoRR Fabian Bongratz, Yitong Li, Sama Elbaroudy, Christian Wachinger
2025	J	`jnl`	Beyond Benchmarks: Dynamic, Automatic And Systematic Red-Teaming Agents For Trustworthy Medical Language Models. CoRR Jiazhen Pan, Bailiang Jian, Paul Hager, Yundi Zhang, Che Liu, Friederike Jungmann, Hongwei Bran Li, Chenyu You, Junde Wu, Jiayuan Zhu, Fenglin Liu, Yuyuan Liu, Niklas Bubeck, Christian Wachinger, Chen Chen, Zhenyu Gong, Cheng Ouyang, Georgios Kaissis, Benedikt Wiestler, Daniel Rueckert
2025	J	`jnl`	DISCO: Mitigating Bias in Deep Learning with Conditional Distance Correlation. CoRR Emre Kavak, Tom Nuno Wolf, Christian Wachinger
2025	A	`conf`	DiaMond: Dementia Diagnosis with Multi-Modal Vision Transformers Using MRI and PET. WACV Yitong Li, Morteza Ghahremani, Youssef Wally, Christian Wachinger
2025	J	`jnl`	Diffusion Bridge Networks Simulate Clinical-grade PET from MRI for Dementia Diagnostics. CoRR Yitong Li, Ralph Buchert, Benita Schmitz-Koep, Timo Grimmer, Björn Ommer, Dennis M. Hedderich, Igor Yakushev, Christian Wachinger
2025	J	`jnl`	Disentangling Progress in Medical Image Registration: Beyond Trend-Driven Architectures towards Domain-Specific Strategies. CoRR Bailiang Jian, Jiazhen Pan, Rohit Jena, Morteza Ghahremani, Hongwei Bran Li, Daniel Rueckert, Christian Wachinger, Benedikt Wiestler
2025	J	`jnl`	Does DINOv3 Set a New Medical Vision Standard? CoRR Che Liu, Yinda Chen, Haoyuan Shi, Jinpeng Lu, Bailiang Jian, Jiazhen Pan, Linghan Cai, Jiayi Wang, Yundi Zhang, Jun Li, Cosmin I. Bercea, Cheng Ouyang, Chen Chen, Zhiwei Xiong, Benedikt Wiestler, Christian Wachinger, Daniel Rueckert, Wenjia Bai, Rossella Arcucci
2025	J	`jnl`	Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges. CoRR Lasse Hansen, Wiebke Heyer, Christoph Großbröhmer, Frederic Madesta, Thilo Sentker, Jiazheng Wang, Yuxi Zhang, Hang Zhang, Min Liu, Junyi Wang, Xi Zhu, Yuhua Li, Liwen Wang, Daniil Morozov, Nazim Haouchine, Joel Honkamaa, Pekka Marttinen, Yichao Zhou, Zuopeng Tan, Zhuoyuan Wang, Yi Wang, Hongchao Zhou, Shunbo Hu, Yi Zhang, Qian Tao, Lukas Förner, Thomas Wendler, Bailiang Jian, Christian Wachinger, Jin Kim, Dan Ruan, Marek Wodzinski, Henning Müller, Tony C. W. Mok, Xi Jia, Jinming Duan, Mikael Brudfors, Seyed-Ahmad Ahmadi, Yunzheng Zhu, William Hsu, Tina Kapur, William M. Wells, Alexandra J. Golby, Aaron Carass, Harrison X. Bai, Yihao Liu, Perrine Paul-Gilloteaux, Joakim Lindblad, Natasa Sladoje, Andreas Walter, Junyu Chen, Reuben Dorent, Alessa Hering, Mattias P. Heinrich
2025	J	`jnl`	MedBridge: Bridging Foundation Vision-Language Models to Medical Image Diagnosis. CoRR Yitong Li, Morteza Ghahremani, Christian Wachinger
2025	J	`jnl`	Organ-DETR: Organ Detection via Transformers. IEEE Trans. Medical Imaging Morteza Ghahremani, Benjamin Raphael Ernhofer, Jiajun Wang, Marcus Makowski, Christian Wachinger
2025	—	`ed.`	Shape in Medical Imaging - International Workshop, ShapeMI 2024, Held in Conjunction with MICCAI 2024, Marrakesh, Morocco, October 6, 2024, Proceedings ShapeMI@MICCAI Christian Wachinger, Beatriz Paniagua, Shireen Y. Elhabian, Gijs Luijten, Jan Egger
2025	—	`conf`	Spherical Brownian Bridge Diffusion Models for Conditional Cortical Thickness Forecasting. ShapeMI@MICCAI Ivan Stoyanov, Fabian Bongratz, Christian Wachinger
2025	J	`jnl`	Spherical Brownian Bridge Diffusion Models for Conditional Cortical Thickness Forecasting. CoRR Ivan Stoyanov, Fabian Bongratz, Christian Wachinger
2025	—	`conf`	Template-Based Cortical Surface Reconstruction with Minimal Energy Deformation. ShapeMI@MICCAI Patrick Madlindl, Fabian Bongratz, Christian Wachinger
2025	J	`jnl`	Template-Based Cortical Surface Reconstruction with Minimal Energy Deformation. CoRR Patrick Madlindl, Fabian Bongratz, Christian Wachinger
2025	J	`jnl`	TimeFlow: Longitudinal Brain Image Registration and Aging Progression Analysis. CoRR Bailiang Jian, Jiazhen Pan, Yitong Li, Fabian Bongratz, Ruochen Li, Daniel Rueckert, Benedikt Wiestler, Christian Wachinger
2025	J	`jnl`	Vertex Correspondence and Self-Intersection Reduction in Cortical Surface Reconstruction. IEEE Trans. Medical Imaging Anne-Marie Rickmann, Fabian Bongratz, Christian Wachinger
2025	J	`jnl`	WASUP: Interpretable Classification with Weight-Input Alignment and Class-Discriminative SUPports Vectors. CoRR Tom Nuno Wolf, Christian Wachinger
2025	—	`conf`	X-SiT: Inherently Interpretable Surface Vision Transformers for Dementia Diagnosis. MICCAI (14) Fabian Bongratz, Tom Nuno Wolf, Jaume Gual Ramon, Christian Wachinger
2025	J	`jnl`	X-SiT: Inherently Interpretable Surface Vision Transformers for Dementia Diagnosis. CoRR Fabian Bongratz, Tom Nuno Wolf, Jaume Gual Ramon, Christian Wachinger
2024	J	`jnl`	DiaMond: Dementia Diagnosis with Multi-Modal Vision Transformers Using MRI and PET. CoRR Yitong Li, Morteza Ghahremani, Youssef Wally, Christian Wachinger
2024	—	`conf`	From Barlow Twins to Triplet Training: Differentiating Dementia with Limited Data. MIDL Yitong Li, Tom Nuno Wolf, Sebastian Pölsterl, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2024	J	`jnl`	From Barlow Twins to Triplet Training: Differentiating Dementia with Limited Data. CoRR Yitong Li, Tom Nuno Wolf, Sebastian Pölsterl, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2024	A*	`conf`	H-ViT: A Hierarchical Vision Transformer for Deformable Image Registration. CVPR Morteza Ghahremani, Mohammad Khateri, Bailiang Jian, Benedikt Wiestler, Ehsan Adeli, Christian Wachinger
2024	A*	`conf`	Keep the Faith: Faithful Explanations in Convolutional Neural Networks for Case-Based Reasoning. AAAI Tom Nuno Wolf, Fabian Bongratz, Anne-Marie Rickmann, Sebastian Pölsterl, Christian Wachinger
2024	J	`jnl`	MLV CoRR Fabian Bongratz, Markus Karmann, Adrian Holz, Moritz Bonhoeffer, Viktor Neumaier, Sarah Deli, Benita Schmitz-Koep, Claus Zimmer, Christian Sorg, Melissa Thalhammer, Dennis M. Hedderich, Christian Wachinger
2024	—	`conf`	MLV2-Net: Rater-Based Majority-Label Voting for Consistent Meningeal Lymphatic Vessel Segmentation. ML4H@NeurIPS Fabian Bongratz, Markus Karmann, Adrian Holz, Moritz Bonhoeffer, Viktor Neumaier, Sarah Deli, Benita Schmitz-Koep, Claus Zimmer, Christian Sorg, Melissa Thalhammer, Dennis M. Hedderich, Christian Wachinger
2024	—	`conf`	Mamba? Catch The Hype Or Rethink What Really Helps for Image Registration. WBIR Bailiang Jian, Jiazhen Pan, Morteza Ghahremani, Daniel Rueckert, Christian Wachinger, Benedikt Wiestler
2024	J	`jnl`	Mamba? Catch The Hype Or Rethink What Really Helps for Image Registration. CoRR Bailiang Jian, Jiazhen Pan, Morteza Ghahremani, Daniel Rueckert, Christian Wachinger, Benedikt Wiestler
2024	J	`jnl`	Neural deformation fields for template-based reconstruction of cortical surfaces from MRI. CoRR Fabian Bongratz, Anne-Marie Rickmann, Christian Wachinger
2024	J	`jnl`	Neural deformation fields for template-based reconstruction of cortical surfaces from MRI. Medical Image Anal. Fabian Bongratz, Anne-Marie Rickmann, Christian Wachinger
2024	—	`conf`	PASTA: Pathology-Aware MRI to PET CroSs-modal TrAnslation with Diffusion Models. MICCAI (7) Yitong Li, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2024	J	`jnl`	PASTA: Pathology-Aware MRI to PET Cross-Modal Translation with Diffusion Models. CoRR Yitong Li, Igor Yakushev, Dennis M. Hedderich, Christian Wachinger
2024	A*	`conf`	Stable-Pose: Leveraging Transformers for Pose-Guided Text-to-Image Generation. NeurIPS Jiajun Wang, Morteza Ghahremani, Yitong Li, Björn Ommer, Christian Wachinger
2024	J	`jnl`	Stable-Pose: Leveraging Transformers for Pose-Guided Text-to-Image Generation. CoRR Jiajun Wang, Morteza Ghahremani, Yitong Li, Björn Ommer, Christian Wachinger
2024	J	`jnl`	Stochastic Cortical Self-Reconstruction. CoRR Christian Wachinger, Dennis M. Hedderich, Fabian Bongratz
2024	J	`jnl`	V2C-Long: Longitudinal Cortex Reconstruction with Spatiotemporal Correspondence. CoRR Fabian Bongratz, Jan Fecht, Anne-Marie Rickmann, Christian Wachinger
2023	—	`conf`	Don't PANIC: Prototypical Additive Neural Network for Interpretable Classification of Alzheimer's Disease. IPMI Tom Nuno Wolf, Sebastian Pölsterl, Christian Wachinger
2023	J	`jnl`	Don't PANIC: Prototypical Additive Neural Network for Interpretable Classification of Alzheimer's Disease. CoRR Tom Nuno Wolf, Sebastian Pölsterl, Christian Wachinger
2023	—	`conf`	HALOS: Hallucination-Free Organ Segmentation After Organ Resection Surgery. IPMI Anne-Marie Rickmann, Murong Xu, Tom Nuno Wolf, Oksana P. Kovalenko, Christian Wachinger
2023	J	`jnl`	HALOS: Hallucination-free Organ Segmentation after Organ Resection Surgery. CoRR Anne-Marie Rickmann, Murong Xu, Tom Nuno Wolf, Oksana P. Kovalenko, Christian Wachinger
2023	J	`jnl`	Keep the Faith: Faithful Explanations in Convolutional Neural Networks for Case-Based Reasoning. CoRR Tom Nuno Wolf, Fabian Bongratz, Anne-Marie Rickmann, Sebastian Pölsterl, Christian Wachinger
2023	J	`jnl`	Meshes Meet Voxels: Abdominal Organ Segmentation via Diffeomorphic Deformations. CoRR Fabian Bongratz, Anne-Marie Rickmann, Christian Wachinger
2023	A*	`conf`	RegBN: Batch Normalization of Multimodal Data with Regularization. NeurIPS Morteza Ghahremani, Christian Wachinger
2023	J	`jnl`	RegBN: Batch Normalization of Multimodal Data with Regularization. CoRR Morteza Ghahremani, Christian Wachinger
2023	—	`ed.`	Shape in Medical Imaging - International Workshop, ShapeMI 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings ShapeMI@MICCAI Christian Wachinger, Beatriz Paniagua, Shireen Y. Elhabian, Jianning Li, Jan Egger
2023	J	`jnl`	The Liver Tumor Segmentation Benchmark (LiTS). Medical Image Anal. Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li, Eugene Vorontsov, Avi Ben-Cohen, Georgios Kaissis, Adi Szeskin, Colin Jacobs, Gabriel Efrain Humpire Mamani, Gabriel Chartrand, Fabian Lohöfer, Julian Walter Holch, Wieland H. Sommer, Felix Hofmann, Alexandre Hostettler, Naama Lev-Cohain, Michal Drozdzal, Michal Marianne Amitai, Refael Vivanti, Jacob Sosna, Ivan Ezhov, Anjany Sekuboyina, Fernando Navarro, Florian Kofler, Johannes C. Paetzold, Suprosanna Shit, Xiaobin Hu, Jana Lipková, Markus Rempfler, Marie Piraud, Jan Kirschke, Benedikt Wiestler, Zhiheng Zhang, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Michela Antonelli, Woong Bae, Miriam Bellver, Lei Bi, Hao Chen, Grzegorz Chlebus, Erik B. Dam, Qi Dou, Chi-Wing Fu, Bogdan Georgescu, Xavier Giró-i-Nieto, Felix Grün, Xu Han, Pheng-Ann Heng, Jürgen Hesser, Jan Hendrik Moltz, Christian Igel, Fabian Isensee, Paul Jäger, Fucang Jia, Krishna Chaitanya Kaluva, Mahendra Khened, Ildoo Kim, Jae-Hun Kim, Sungwoong Kim, Simon Kohl, Tomasz K. Konopczynski, Avinash Kori, Ganapathy Krishnamurthi, Fan Li, Hongchao Li, Junbo Li, Xiaomeng Li, John S. Lowengrub, Jun Ma, Klaus H. Maier-Hein, Kevis-Kokitsi Maninis, Hans Meine, Dorit Merhof, Akshay Pai, Mathias Perslev, Jens Petersen, Jordi Pont-Tuset, Jin Qi, Xiaojuan Qi, Oliver Rippel, Karsten Roth, Ignacio Sarasua, Andrea Schenk, Zengming Shen, Jordi Torres, Christian Wachinger, Chunliang Wang, Leon Weninger, Jianrong Wu, Daguang Xu, Xiaoping Yang, Simon Chun-Ho Yu, Yading Yuan, Miao Yue, Liping Zhang, Manuel Jorge Cardoso, Spyridon Bakas, Rickmer Braren, Volker Heinemann, Christopher Pal, An Tang, Samuel Kadoury, Luc Soler, Bram van Ginneken, Hayit Greenspan, Leo Joskowicz, Bjoern H. Menze
2023	—	`conf`	Vertex Correspondence in Cortical Surface Reconstruction. MICCAI (8) Anne-Marie Rickmann, Fabian Bongratz, Christian Wachinger
2022	J	`jnl`	AbdomenNet: deep neural network for abdominal organ segmentation in epidemiologic imaging studies. BMC Medical Imaging Anne-Marie Rickmann, Jyotirmay Senapati, Oksana P. Kovalenko, Annette Peters, Fabian Bamberg, Christian Wachinger
2022	—	`conf`	CASHformer: Cognition Aware SHape Transformer for Longitudinal Analysis. MICCAI (1) Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2022	J	`jnl`	CASHformer: Cognition Aware SHape Transformer for Longitudinal Analysis. CoRR Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2022	J	`jnl`	DAFT: A universal module to interweave tabular data and 3D images in CNNs. NeuroImage Tom Nuno Wolf, Sebastian Pölsterl, Christian Wachinger, Alzheimer's Disease Neuroimaging Initiative, Australian Imaging Biomarkers Lifestyle flagship study of ageing
2022	—	`conf`	Is a PET All You Need? A Multi-modal Study for Alzheimer's Disease Using 3D CNNs. MICCAI (1) Marla Narazani, Ignacio Sarasua, Sebastian Pölsterl, Aldana Lizarraga, Igor Yakushev, Christian Wachinger
2022	J	`jnl`	Is a PET all you need? A multi-modal study for Alzheimer's disease using 3D CNNs. CoRR Marla Narazani, Ignacio Sarasua, Sebastian Pölsterl, Aldana Lizarraga, Igor Yakushev, Christian Wachinger
2022	—	`conf`	Joint Reconstruction and Parcellation of Cortical Surfaces. MLCN@MICCAI Anne-Marie Rickmann, Fabian Bongratz, Sebastian Pölsterl, Ignacio Sarasua, Christian Wachinger
2022	J	`jnl`	Joint Reconstruction and Parcellation of Cortical Surfaces. CoRR Anne-Marie Rickmann, Fabian Bongratz, Sebastian Pölsterl, Ignacio Sarasua, Christian Wachinger
2022	A*	`conf`	Vox2Cortex: Fast Explicit Reconstruction of Cortical Surfaces from 3D MRI Scans with Geometric Deep Neural Networks. CVPR Fabian Bongratz, Anne-Marie Rickmann, Sebastian Pölsterl, Christian Wachinger
2022	J	`jnl`	Vox2Cortex: Fast Explicit Reconstruction of Cortical Surfaces from 3D MRI Scans with Geometric Deep Neural Networks. CoRR Fabian Bongratz, Anne-Marie Rickmann, Sebastian Pölsterl, Christian Wachinger
2021	—	`conf`	Alzheimer's Disease Diagnosis via Deep Factorization Machine Models. MLMI@MICCAI Raphael Ronge, Kwangsik Nho, Christian Wachinger, Sebastian Pölsterl
2021	J	`jnl`	Alzheimer's Disease Diagnosis via Deep Factorization Machine Models. CoRR Raphael Ronge, Kwangsik Nho, Christian Wachinger, Sebastian Pölsterl
2021	—	`conf`	Combining 3D Image and Tabular Data via the Dynamic Affine Feature Map Transform. MICCAI (5) Sebastian Pölsterl, Tom Nuno Wolf, Christian Wachinger
2021	J	`jnl`	Combining 3D Image and Tabular Data via the Dynamic Affine Feature Map Transform. CoRR Sebastian Pölsterl, Tom Nuno Wolf, Christian Wachinger
2021	J	`jnl`	Detect and correct bias in multi-site neuroimaging datasets. Medical Image Anal. Christian Wachinger, Anna Rieckmann, Sebastian Pölsterl
2021	J	`jnl`	Discriminative and generative models for anatomical shape analysis on point clouds with deep neural networks. Medical Image Anal. Benjamín Gutiérrez-Becker, Ignacio Sarasua, Christian Wachinger
2021	—	`conf`	Estimation of Causal Effects in the Presence of Unobserved Confounding in the Alzheimer's Continuum. IPMI Sebastian Pölsterl, Christian Wachinger
2021	—	`conf`	Geometric Deep Learning on Anatomical Meshes for the Prediction of Alzheimer's Disease. ISBI Ignacio Sarasua, Jonwong Lee, Christian Wachinger
2021	J	`jnl`	Geometric Deep Learning on Anatomical Meshes for the Prediction of Alzheimer's Disease. CoRR Ignacio Sarasua, Jonwong Lee, Christian Wachinger
2021	J	`jnl`	STRUDEL: Self-Training with Uncertainty Dependent Label Refinement across Domains. CoRR Fabian Gröger, Anne-Marie Rickmann, Christian Wachinger
2021	—	`conf`	STRUDEL: Self-training with Uncertainty Dependent Label Refinement Across Domains. MLMI@MICCAI Fabian Gröger, Anne-Marie Rickmann, Christian Wachinger
2021	—	`conf`	Scalable, Axiomatic Explanations of Deep Alzheimer's Diagnosis from Heterogeneous Data. MICCAI (3) Sebastian Pölsterl, Christina Aigner, Christian Wachinger
2021	J	`jnl`	Scalable, Axiomatic Explanations of Deep Alzheimer's Diagnosis from Heterogeneous Data. CoRR Sebastian Pölsterl, Christina Aigner, Christian Wachinger
2021	—	`conf`	Semi-Structured Deep Piecewise Exponential Models. SPACA Philipp Kopper, Sebastian Pölsterl, Christian Wachinger, Bernd Bischl, Andreas Bender, David Rügamer
2021	J	`jnl`	The Medical Segmentation Decathlon. CoRR Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbeláez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso
2021	—	`conf`	TransforMesh: A Transformer Network for Longitudinal Modeling of Anatomical Meshes. MLMI@MICCAI Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2021	J	`jnl`	TransforMesh: A Transformer Network for Longitudinal modeling of Anatomical Meshes. CoRR Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2020	J	`jnl`	'Squeeze & excite' guided few-shot segmentation of volumetric images. Medical Image Anal. Abhijit Guha Roy, Shayan Siddiqui, Sebastian Pölsterl, Nassir Navab, Christian Wachinger
2020	—	`conf`	Adversarial Learned Molecular Graph Inference and Generation. ECML/PKDD (2) Sebastian Pölsterl, Christian Wachinger
2020	—	`conf`	Bayesian Neural Networks for Uncertainty Estimation of Imaging Biomarkers. MLMI@MICCAI Jyotirmay Senapati, Abhijit Guha Roy, Sebastian Pölsterl, Daniel Gutmann, Sergios Gatidis, Christopher Schlett, Annette Peters, Fabian Bamberg, Christian Wachinger
2020	J	`jnl`	Bayesian Neural Networks for Uncertainty Estimation of Imaging Biomarkers. CoRR Jyotirmay Senapati, Abhijit Guha Roy, Sebastian Pölsterl, Daniel Gutmann, Sergios Gatidis, Christopher Schlett, Annette Peters, Fabian Bamberg, Christian Wachinger
2020	J	`jnl`	Controlling for Unknown Confounders in Neuroimaging. CoRR Sebastian Pölsterl, Christian Wachinger
2020	J	`jnl`	Detect and Correct Bias in Multi-Site Neuroimaging Datasets. CoRR Christian Wachinger, Anna Rieckmann, Sebastian Pölsterl
2020	J	`jnl`	Discriminative and Generative Models for Anatomical Shape Analysison Point Clouds with Deep Neural Networks. CoRR Benjamín Gutiérrez-Becker, Ignacio Sarasua, Christian Wachinger
2020	—	`conf`	Importance Driven Continual Learning for Segmentation Across Domains. MLMI@MICCAI Sinan Özgür Özgün, Anne-Marie Rickmann, Abhijit Guha Roy, Christian Wachinger
2020	J	`jnl`	Importance Driven Continual Learning for Segmentation Across Domains. CoRR Sinan Özgür Özgün, Anne-Marie Rickmann, Abhijit Guha Roy, Christian Wachinger
2020	J	`jnl`	Keypoint Transfer for Fast Whole-Body Segmentation. IEEE Trans. Medical Imaging Christian Wachinger, Matthew Toews, Georg Langs, William M. Wells III, Polina Golland
2020	J	`jnl`	Neuroimage signature from salient keypoints is highly specific to individuals and shared by close relatives. NeuroImage Laurent Chauvin, Kuldeep Kumar, Christian Wachinger, Mark G. Vangel, Jacques A. de Guise, Christian Desrosiers, William M. Wells III, Matthew Toews
2020	J	`jnl`	Recalibrating 3D ConvNets With Project & Excite. IEEE Trans. Medical Imaging Anne-Marie Rickmann, Abhijit Guha Roy, Ignacio Sarasua, Christian Wachinger
2020	J	`jnl`	Recalibrating 3D ConvNets with Project & Excite. CoRR Anne-Marie Rickmann, Abhijit Guha Roy, Ignacio Sarasua, Christian Wachinger
2020	—	`conf`	Recalibration of Neural Networks for Point Cloud Analysis. 3DV Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2020	J	`jnl`	Recalibration of Neural Networks for Point Cloud Analysis. CoRR Ignacio Sarasua, Sebastian Pölsterl, Christian Wachinger
2020	J	`jnl`	Semi-Structured Deep Piecewise Exponential Models. CoRR Philipp Kopper, Sebastian Pölsterl, Christian Wachinger, Bernd Bischl, Andreas Bender, David Rügamer
2020	—	`ed.`	Shape in Medical Imaging - International Workshop, ShapeMI 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 4, 2020, Proceedings ShapeMI@MICCAI Martin Reuter, Christian Wachinger, Hervé Lombaert, Beatriz Paniagua, Orcun Goksel, Islem Rekik
2019	—	`conf`	'Project & Excite' Modules for Segmentation of Volumetric Medical Scans. MICCAI (2) Anne-Marie Rickmann, Abhijit Guha Roy, Ignacio Sarasua, Nassir Navab, Christian Wachinger
2019	J	`jnl`	'Project & Excite' Modules for Segmentation of Volumetric Medical Scans. CoRR Anne-Marie Rickmann, Abhijit Guha Roy, Ignacio Sarasua, Nassir Navab, Christian Wachinger
2019	J	`jnl`	'Squeeze & Excite' Guided Few-Shot Segmentation of Volumetric Images. CoRR Abhijit Guha Roy, Shayan Siddiqui, Sebastian Pölsterl, Nassir Navab, Christian Wachinger
2019	—	`conf`	A Wide and Deep Neural Network for Survival Analysis from Anatomical Shape and Tabular Clinical Data. PKDD/ECML Workshops (1) Sebastian Pölsterl, Ignacio Sarasua, Benjamín Gutiérrez-Becker, Christian Wachinger
2019	J	`jnl`	A Wide and Deep Neural Network for Survival Analysis from Anatomical Shape and Tabular Clinical Data. CoRR Sebastian Pölsterl, Ignacio Sarasua, Benjamín Gutiérrez-Becker, Christian Wachinger
2019	—	`conf`	An AutoML Approach for the Prediction of Fluid Intelligence from MRI-Derived Features. ABCD-NP@MICCAI Sebastian Pölsterl, Benjamín Gutiérrez-Becker, Ignacio Sarasua, Abhijit Guha Roy, Christian Wachinger
2019	J	`jnl`	Bayesian QuickNAT: Model uncertainty in deep whole-brain segmentation for structure-wise quality control. NeuroImage Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2019	J	`jnl`	BrainTorrent: A Peer-to-Peer Environment for Decentralized Federated Learning. CoRR Abhijit Guha Roy, Shayan Siddiqui, Sebastian Pölsterl, Nassir Navab, Christian Wachinger
2019	J	`jnl`	Data Augmentation with Manifold Exploring Geometric Transformations for Increased Performance and Robustness. CoRR Magdalini Paschali, Walter Simson, Abhijit Guha Roy, Muhammad Ferjad Naeem, Rüdiger Göbl, Christian Wachinger, Nassir Navab
2019	—	`conf`	Learning a Conditional Generative Model for Anatomical Shape Analysis. IPMI Benjamín Gutiérrez-Becker, Christian Wachinger
2019	J	`jnl`	Likelihood-Free Inference and Generation of Molecular Graphs. CoRR Sebastian Pölsterl, Christian Wachinger
2019	—	`conf`	Manifold Exploring Data Augmentation with Geometric Transformations for Increased Performance and Robustness. IPMI Magdalini Paschali, Walter Simson, Abhijit Guha Roy, Rüdiger Göbl, Christian Wachinger, Nassir Navab
2019	—	`conf`	Prediction of Fluid Intelligence from T1-Weighted Magnetic Resonance Images. ABCD-NP@MICCAI Sebastian Pölsterl, Benjamín Gutiérrez-Becker, Ignacio Sarasua, Abhijit Guha Roy, Christian Wachinger
2019	—	`conf`	Quantifying Confounding Bias in Neuroimaging Datasets with Causal Inference. MICCAI (4) Christian Wachinger, Benjamín Gutiérrez-Becker, Anna Rieckmann, Sebastian Pölsterl
2019	J	`jnl`	Quantifying Confounding Bias in Neuroimaging Datasets with Causal Inference. CoRR Christian Wachinger, Benjamín Gutiérrez-Becker, Anna Rieckmann, Sebastian Pölsterl
2019	J	`jnl`	QuickNAT: A fully convolutional network for quick and accurate segmentation of neuroanatomy. NeuroImage Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger, Alzheimer's Disease Neuroimaging Initiative
2019	J	`jnl`	Recalibrating Fully Convolutional Networks With Spatial and Channel "Squeeze and Excitation" Blocks. IEEE Trans. Medical Imaging Abhijit Guha Roy, Nassir Navab, Christian Wachinger
2018	—	`conf`	Abstract: Fast MRI Whole Brain Segmentation with Fully Convolutional Neural Networks. Bildverarbeitung für die Medizin Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Bayesian QuickNAT: Model Uncertainty in Deep Whole-Brain Segmentation for Structure-wise Quality Control. CoRR Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2018	—	`conf`	Concurrent Spatial and Channel 'Squeeze & Excitation' in Fully Convolutional Networks. MICCAI (1) Abhijit Guha Roy, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Concurrent Spatial and Channel Squeeze & Excitation in Fully Convolutional Networks. CoRR Abhijit Guha Roy, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Deep Multi-Structural Shape Analysis: Application to Neuroanatomy. CoRR Benjamín Gutiérrez-Becker, Christian Wachinger
2018	—	`conf`	Deep Multi-structural Shape Analysis: Application to Neuroanatomy. MICCAI (3) Benjamín Gutiérrez-Becker, Christian Wachinger
2018	—	`conf`	Deep Shape Analysis on Abdominal Organs for Diabetes Prediction. ShapeMI@MICCAI Benjamín Gutiérrez-Becker, Sergios Gatidis, Daniel Gutmann, Annette Peters, Christopher Schlett, Fabian Bamberg, Christian Wachinger
2018	J	`jnl`	Deep Shape Analysis on Abdominal Organs for Diabetes Prediction. CoRR Benjamín Gutiérrez-Becker, Sergios Gatidis, Daniel Gutmann, Annette Peters, Christopher Schlett, Fabian Bamberg, Christian Wachinger
2018	J	`jnl`	DeepNAT: Deep convolutional neural network for segmenting neuroanatomy. NeuroImage Christian Wachinger, Martin Reuter, Tassilo Klein
2018	J	`jnl`	Detect, Quantify, and Incorporate Dataset Bias: A Neuroimaging Analysis on 12, 207 Individuals. CoRR Christian Wachinger, Benjamín Gutiérrez-Becker, Anna Rieckmann
2018	J	`jnl`	Gaussian Process Uncertainty in Age Estimation as a Measure of Brain Abnormality. CoRR Benjamín Gutiérrez-Becker, Tassilo Klein, Christian Wachinger
2018	J	`jnl`	Gaussian process uncertainty in age estimation as a measure of brain abnormality. NeuroImage Benjamín Gutiérrez-Becker, Tassilo Klein, Christian Wachinger
2018	J	`jnl`	InfiNet: Fully Convolutional Networks for Infant Brain MRI Segmentation. CoRR Shubham Kumar, Sailesh Conjeti, Abhijit Guha Roy, Christian Wachinger, Nassir Navab
2018	—	`conf`	InfiNet: Fully convolutional networks for infant brain MRI segmentation. ISBI Shubham Kumar, Sailesh Conjeti, Abhijit Guha Roy, Christian Wachinger, Nassir Navab
2018	—	`conf`	Inherent Brain Segmentation Quality Control from Fully ConvNet Monte Carlo Sampling. MICCAI (1) Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Inherent Brain Segmentation Quality Control from Fully ConvNet Monte Carlo Sampling. CoRR Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Keypoint Transfer for Fast Whole-Body Segmentation. CoRR Christian Wachinger, Matthew Toews, Georg Langs, William M. Wells III, Polina Golland
2018	J	`jnl`	QuickNAT: Segmenting MRI Neuroanatomy in 20 seconds. CoRR Abhijit Guha Roy, Sailesh Conjeti, Nassir Navab, Christian Wachinger
2018	J	`jnl`	Recalibrating Fully Convolutional Networks with Spatial and Channel 'Squeeze & Excitation' Blocks. CoRR Abhijit Guha Roy, Nassir Navab, Christian Wachinger
2018	—	`ed.`	Shape in Medical Imaging - International Workshop, ShapeMI 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings ShapeMI@@MICCAI Martin Reuter, Christian Wachinger, Hervé Lombaert, Beatriz Paniagua, Marcel Lüthi, Bernhard Egger
2017	J	`jnl`	A Multi-Armed Bandit to Smartly Select a Training Set from Big Medical Data. CoRR Benjamín Gutiérrez, Loïc Peter, Tassilo Klein, Christian Wachinger
2017	—	`conf`	A Multi-armed Bandit to Smartly Select a Training Set from Big Medical Data. MICCAI (3) Benjamín Gutiérrez, Loïc Peter, Tassilo Klein, Christian Wachinger
2017	—	`conf`	Abtract: Shape Analysis in Human Brain MRI. Bildverarbeitung für die Medizin Martin Reuter, Christian Wachinger
2017	J	`jnl`	DeepNAT: Deep Convolutional Neural Network for Segmenting Neuroanatomy. CoRR Christian Wachinger, Martin Reuter, Tassilo Klein
2017	J	`jnl`	Efficient Descriptor-Based Segmentation of Parotid Glands With Nonlocal Means. IEEE Trans. Biomed. Eng. Christian Wachinger, Matthew S. Brennan, Gregory C. Sharp, Polina Golland
2017	—	`conf`	Error Corrective Boosting for Learning Fully Convolutional Networks with Limited Data. MICCAI (3) Abhijit Guha Roy, Sailesh Conjeti, Debdoot Sheet, Amin Katouzian, Nassir Navab, Christian Wachinger
2017	J	`jnl`	Error Corrective Boosting for Learning Fully Convolutional Networks with Limited Data. CoRR Abhijit Guha Roy, Sailesh Conjeti, Debdoot Sheet, Amin Katouzian, Nassir Navab, Christian Wachinger
2017	—	`conf`	Latent Processes Governing Neuroanatomical Change in Aging and Dementia. MICCAI (3) Christian Wachinger, Anna Rieckmann, Martin Reuter
2017	J	`jnl`	ReLayNet: Retinal Layer and Fluid Segmentation of Macular Optical Coherence Tomography using Fully Convolutional Network. CoRR Abhijit Guha Roy, Sailesh Conjeti, Sri Phani Krishna Karri, Debdoot Sheet, Amin Katouzian, Christian Wachinger, Nassir Navab
2016	J	`jnl`	Domain adaptation for Alzheimer's disease diagnostics. NeuroImage Christian Wachinger, Martin Reuter
2016	—	`ed.`	Spectral and Shape Analysis in Medical Imaging - First International Workshop, SeSAMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Revised Selected Papers SeSAMI@MICCAI Martin Reuter, Christian Wachinger, Hervé Lombaert
2015	—	`conf`	A Feature-Based Approach to Big Data Analysis of Medical Images. IPMI Matthew Toews, Christian Wachinger, Raúl San José Estépar, William M. Wells III
2015	J	`jnl`	BrainPrint: A discriminative characterization of brain morphology. NeuroImage Christian Wachinger, Polina Golland, William S. Kremen, Bruce Fischl, Martin Reuter
2015	J	`jnl`	Diverse Landmark Sampling from Determinantal Point Processes for Scalable Manifold Learning. CoRR Christian Wachinger, Polina Golland
2015	—	`conf`	Keypoint Transfer Segmentation. IPMI Christian Wachinger, Matthew Toews, Georg Langs, William M. Wells III, Polina Golland
2015	—	`conf`	Sampling from Determinantal Point Processes for Scalable Manifold Learning. IPMI Christian Wachinger, Polina Golland
2014	—	`conf`	Atlas-Based Under-Segmentation. MICCAI (1) Christian Wachinger, Polina Golland
2014	J	`jnl`	Blockface histology with optical coherence tomography: A comparison with Nissl staining. NeuroImage Caroline Magnain, Jean Augustinack, Martin Reuter, Christian Wachinger, Matthew P. Frosch, Timothy Ragan, Taner Akkin, Van J. Wedeen, David A. Boas, Bruce Fischl
2014	—	`conf`	BrainPrint : Identifying Subjects by Their Brain. MICCAI (3) Christian Wachinger, Polina Golland, Martin Reuter
2014	—	`conf`	Gaussian Process Interpolation for Uncertainty Estimation in Image Registration. MICCAI (1) Christian Wachinger, Polina Golland, Martin Reuter, William M. Wells III
2013	—	`conf`	Contour-Driven Regression for Label Inference in Atlas-Based Segmentation. MICCAI (3) Christian Wachinger, Gregory C. Sharp, Polina Golland
2013	J	`jnl`	Simultaneous Registration of Multiple Images: Similarity Metrics and Efficient Optimization. IEEE Trans. Pattern Anal. Mach. Intell. Christian Wachinger, Nassir Navab
2013	J	`jnl`	Sparse Projections of Medical Images onto Manifolds CoRR George H. Chen, Christian Wachinger, Polina Golland
2013	—	`conf`	Sparse Projections of Medical Images onto Manifolds. IPMI George H. Chen, Christian Wachinger, Polina Golland
2012	A*	`conf`	A contextual maximum likelihood framework for modeling image registration. CVPR Christian Wachinger, Nassir Navab
2012	J	`jnl`	Entropy and Laplacian images: Structural representations for multi-modal registration. Medical Image Anal. Christian Wachinger, Nassir Navab
2012	—	`conf`	MRI Confirmed Prostate Tissue Classification with Laplacian Eigenmaps of Ultrasound RF Spectra. MLMI Mehdi Moradi, Christian Wachinger, Andriy Fedorov, William M. Wells III, Tina Kapur, Luciant D. Wolfsberger, Paul Nguyen, Clare M. Tempany
2012	J	`jnl`	Manifold learning for image-based breathing gating in ultrasound and MRI. Medical Image Anal. Christian Wachinger, Mehmet Yigitsoy, Erik-Jan Rijkhorst, Nassir Navab
2012	—	`conf`	Spectral Label Fusion. MICCAI (3) Christian Wachinger, Polina Golland
2012	J	`jnl`	The 2D analytic signal for envelope detection and feature extraction on ultrasound images. Medical Image Anal. Christian Wachinger, Tassilo Klein, Nassir Navab
2011	—	`conf`	3D Stent Recovery from One X-Ray Projection. MICCAI (1) Stefanie Demirci, Ali Bigdelou, Lejing Wang, Christian Wachinger, Maximilian Baust, Radhika Tibrewal, Reza Ghotbi, Hans-Henning Eckstein, Nassir Navab
2011	B	`conf`	Manifold learning for image-based breathing gating in MRI. Image Processing Mehmet Yigitsoy, Christian Wachinger, Nassir Navab
2011	—	`conf`	Temporal Groupwise Registration for Motion Modeling. IPMI Mehmet Yigitsoy, Christian Wachinger, Nassir Navab
2011	—	`conf`	The 2D Analytic Signal on RF and B-Mode Ultrasound Images. IPMI Christian Wachinger, Tassilo Klein, Nassir Navab
2011	—	`ch.`	Ultraschall-Mosaicing und Bewegungsmodellierung: Anwendungen der medizinischen Bildregistrierung. Ausgezeichnete Informatikdissertationen Christian Wachinger
2011	—	`—`	Ultrasound Mosaicing and Motion Modeling - Applications in Medical Image Registration. Christian Wachinger
2010	—	`conf`	Manifold Learning for Image-Based Breathing Gating with Application to 4D Ultrasound. MICCAI (2) Christian Wachinger, Mehmet Yigitsoy, Nassir Navab
2010	A	`conf`	Manifold Learning for Multi-Modal Image Registration. BMVC Christian Wachinger, Nassir Navab
2010	—	`conf`	Manifold learning for patient position detection in MRI. ISBI Christian Wachinger, Diana Mateus, Andreas Keil, Nassir Navab
2010	—	`conf`	Structural image representation for image registration. CVPR Workshops Christian Wachinger, Nassir Navab
2009	—	`conf`	Alignment of Viewing-Angle Dependent Ultrasound Images. MICCAI (1) Christian Wachinger, Nassir Navab
2009	—	`conf`	MRI Composing for Whole Body Imaging. Bildverarbeitung für die Medizin Ben Glocker, Christian Wachinger, Jochen Zeltner, Nikos Paragios, Nikos Komodakis, Michael Sass Hansen, Nassir Navab
2009	A*	`conf`	Similarity metrics and efficient optimization for simultaneous registration. CVPR Christian Wachinger, Nassir Navab
2009	B	`conf`	Sphere extraction in MR images with application to whole-body MRI. Image Processing Christian Wachinger, Simon Baumann, Jochen Zeltner, Ben Glocker, Nassir Navab
2009	—	`conf`	Towards an Estimation of Acoustic Impedance from Multiple Ultrasound Images. Bildverarbeitung für die Medizin Christian Wachinger, Ramtin Shams, Nassir Navab
2008	—	`conf`	Deformable Mosaicing for Whole-Body MRI. MICCAI (2) Christian Wachinger, Ben Glocker, Jochen Zeltner, Nikos Paragios, Nikos Komodakis, Michael Sass Hansen, Nassir Navab
2008	—	`conf`	Estimation of acoustic impedance from multiple ultrasound images with application to spatial compounding. CVPR Workshops Christian Wachinger, Ramtin Shams, Nassir Navab
2008	B	`conf`	Ultrasound specific similarity measures for three-dimensional mosaicing. Image Processing Christian Wachinger, Nassir Navab
2007	—	`conf`	Three-Dimensional Ultrasound Mosaicing. MICCAI (2) Christian Wachinger, Wolfgang Wein, Nassir Navab
2006	—	`conf`	Patient Position Detection for SAR Optimization in Magnetic Resonance Imaging. MICCAI (2) Andreas Keil, Christian Wachinger, Gerhard Brinker, Stefan Thesen, Nassir Navab