Christian Höner zu Siederdissen

27 papers A 1C 1Journal 19Unranked 6
YearRankTypeTitle / Venue / Authors
2022 — conf
Accuracy of RNA Structure Prediction Depends on the Pseudoknot Grammar.
BSB
Dustyn Eggers, Christian Höner zu Siederdissen, Peter F. Stadler
2021 J jnl
Compositional Properties of Alignments.
Math. Comput. Sci.
Sarah J. Berkemer, Christian Höner zu Siederdissen, Peter F. Stadler
2021 J jnl
Superbubbles as an empirical characteristic of directed networks.
Netw. Sci.
Fabian Gärtner, Felix Kühnl, Carsten R. Seemann, Christian Höner zu Siederdissen, Peter F. Stadler
2020 J jnl
Superbubbles as an Empirical Characteristic of Directed Networks.
CoRR
Fabian Gärtner, Felix Kühnl, Carsten R. Seemann, Christian Höner zu Siederdissen, Peter F. Stadler
2019 J jnl
SSS-test: a novel test for detecting positive selection on RNA secondary structure.
BMC Bioinform.
Maria Beatriz Walter Costa, Christian Höner zu Siederdissen, Marko Dunjic, Peter F. Stadler, Katja Nowick
2019 J jnl
flowEMMi: an automated model-based clustering tool for microbial cytometric data.
BMC Bioinform.
Joachim Ludwig, Christian Höner zu Siederdissen, Zishu Liu, Peter F. Stadler, Susann Müller
2018 J jnl
Alignments as Compositional Structures.
CoRR
Sarah J. Berkemer, Christian Höner zu Siederdissen, Peter F. Stadler
2018 J jnl
CMV: visualization for RNA and protein family models and their comparisons.
Bioinform.
Florian Eggenhofer, Ivo L. Hofacker, Rolf Backofen, Christian Höner zu Siederdissen
2018 J jnl
Coordinate systems for supergenomes.
Algorithms Mol. Biol.
Fabian Gärtner, Christian Höner zu Siederdissen, Lydia Müller, Peter F. Stadler
2017 J jnl
Algebraic Dynamic Programming on Trees.
Algorithms
Sarah Berkemer, Christian Höner zu Siederdissen, Peter F. Stadler
2017 J jnl
Partially local three-way alignments and the sequence signatures of mitochondrial genome rearrangements.
Algorithms Mol. Biol.
Marwa Al Arab, Matthias Bernt, Christian Höner zu Siederdissen, Kifah Tout, Peter F. Stadler
2016 J jnl
Algebraic dynamic programming for multiple context-free grammars.
Theor. Comput. Sci.
Maik Riechert, Christian Höner zu Siederdissen, Peter F. Stadler
2015 J jnl
Algebraic Dynamic Programming over general data structures.
BMC Bioinform.
Christian Höner zu Siederdissen, Sonja J. Prohaska, Peter F. Stadler
2015 J jnl
Product Grammars for Alignment and Folding.
IEEE ACM Trans. Comput. Biol. Bioinform.
Christian Höner zu Siederdissen, Ivo L. Hofacker, Peter F. Stadler
2014 — conf
Comparative Detection of Processed Small RNAs in Archaea.
IWBBIO
Christian Höner zu Siederdissen, Sarah Berkemer, Fabian Amman, Axel Wintsche, Sebastian Will, Sonja J. Prohaska, Peter F. Stadler
2014 — conf
Dynamic Programming for Set Data Types.
BSB
Christian Höner zu Siederdissen, Sonja J. Prohaska, Peter F. Stadler
2014 C conf
The HERMIT in the stream: fusing stream fusion's concatMap.
PEPM
Andrew Farmer, Christian Höner zu Siederdissen, Andy Gill
2013 J jnl
2D Meets 4G: G-Quadruplexes in RNA Secondary Structure Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ronny Lorenz, Stephan H. Bernhart, Jing Qin, Christian Höner zu Siederdissen, Andrea Tanzer, Fabian Amman, Ivo L. Hofacker, Peter F. Stadler
2013 J jnl
CMCompare webserver: comparing RNA families via covariance models.
Nucleic Acids Res.
Florian Eggenhofer, Ivo L. Hofacker, Christian Höner zu Siederdissen
2013 — conf
How to Multiply Dynamic Programming Algorithms.
BSB
Christian Höner zu Siederdissen, Ivo L. Hofacker, Peter F. Stadler
2012 — conf
RNA Folding Algorithms with G-Quadruplexes.
BSB
Ronny Lorenz, Stephan H. Bernhart, Fabian Externbrink, Jing Qin, Christian Höner zu Siederdissen, Fabian Amman, Ivo L. Hofacker, Peter F. Stadler
2012 A conf
Sneaking around concatMap: efficient combinators for dynamic programming.
ICFP
Christian Höner zu Siederdissen
2011 J jnl
A folding algorithm for extended RNA secondary structures.
Bioinform.
Christian Höner zu Siederdissen, Stephan H. Bernhart, Peter F. Stadler, Ivo L. Hofacker
2011 J jnl
Semantics and Ambiguity of Stochastic RNA Family Models.
IEEE ACM Trans. Comput. Biol. Bioinform.
Robert Giegerich, Christian Höner zu Siederdissen
2011 J jnl
ViennaRNA Package 2.0.
Algorithms Mol. Biol.
Ronny Lorenz, Stephan H. Bernhart, Christian Höner zu Siederdissen, Hakim Tafer, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker
2010 J jnl
Discriminatory power of RNA family models.
Bioinform.
Christian Höner zu Siederdissen, Ivo L. Hofacker
2006 — conf
Discovering Biomarkers for Myocardial Infarction from SELDI-TOF Spectra.
GfKl
Christian Höner zu Siederdissen, Susanne Ragg, Sven Rahmann