Chris Whidden

20 papers B 1C 1Journal 14Unranked 4
YearRankTypeTitle / Venue / Authors
2019 J jnl
Calculating the Unrooted Subtree Prune-and-Regraft Distance.
IEEE ACM Trans. Comput. Biol. Bioinform.
Chris Whidden, Frederick A. Matsen IV
2018 — conf
Efficiently Inferring Pairwise Subtree Prune-and-Regraft Adjacencies between Phylogenetic Trees.
ANALCO
Chris Whidden, Frederick A. Matsen IV
2018 J jnl
Systematic Exploration of the High Likelihood Set of Phylogenetic Tree Topologies.
CoRR
Chris Whidden, Brian C. Claywell, Thayer Fisher, Andrew F. Magee, Mathieu Fourment, Frederick A. Matsen IV
2017 J jnl
A Resolution of the Static Formulation Question for the Problem of Computing the History Bound.
IEEE ACM Trans. Comput. Biol. Bioinform.
Julia Matsieva, Steven Kelk, Céline Scornavacca, Chris Whidden, Dan Gusfield
2017 J jnl
Ricci-Ollivier curvature of the rooted phylogenetic subtree-prune-regraft graph.
Theor. Comput. Sci.
Chris Whidden, Frederick A. Matsen IV
2016 J jnl
Chain Reduction Preserves the Unrooted Subtree Prune-and-Regraft Distance.
CoRR
Chris Whidden, Frederick A. Matsen IV
2016 J jnl
Efficiently Inferring Pairwise Subtree Prune-and-Regraft Adjacencies between Phylogenetic Trees.
CoRR
Chris Whidden, Frederick A. Matsen IV
2016 J jnl
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests of Multifurcating Trees.
Algorithmica
Chris Whidden, Robert G. Beiko, Norbert Zeh
2016 J jnl
Hybridization Number on Three Rooted Binary Trees is EPT.
SIAM J. Discret. Math.
Leo van Iersel, Steven Kelk, Nela Lekic, Chris Whidden, Norbert Zeh
2016 — conf
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph.
ANALCO
Chris Whidden, Frederick A. Matsen IV
2015 J jnl
Calculating the Unrooted Subtree Prune-and-Regraft Distance.
CoRR
Chris Whidden, Frederick A. Matsen IV
2015 J jnl
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph.
CoRR
Chris Whidden, Frederick A. Matsen IV
2014 J jnl
Hybridization Number on Three Trees.
CoRR
Leo van Iersel, Steven Kelk, Nela Lekic, Chris Whidden, Norbert Zeh
2013 J jnl
Fixed-Parameter Algorithms for Maximum Agreement Forests.
SIAM J. Comput.
Chris Whidden, Robert G. Beiko, Norbert Zeh
2013 J jnl
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests of Multifurcating Trees
CoRR
Chris Whidden, Robert G. Beiko, Norbert Zeh
2011 J jnl
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests
CoRR
Chris Whidden, Robert G. Beiko, Norbert Zeh
2010 B conf
Fast FPT Algorithms for Computing Rooted Agreement Forests: Theory and Experiments.
SEA
Chris Whidden, Robert G. Beiko, Norbert Zeh
2009 C conf
A Unifying View on Approximation and FPT of Agreement Forests.
WABI
Chris Whidden, Norbert Zeh
2009 — conf
Finding optimal parameters for edit distance based sequence classification is NP-hard.
KDD Workshop on Statistical and Relational Learning in Bioinformatics
Vlado Keselj, Haibin Liu, Norbert Zeh, Christian Blouin, Chris Whidden
2005 — conf
DalTREC 2005 QA System Jellyfish: Mark-and-Match Approach to Question Answering.
TREC
Tony Abou-Assaleh, Nick Cercone, Jon Doyle, Vlado Keselj, Chris Whidden