Chris P. Ponting

27 papers Journal 27
YearRankTypeTitle / Venue / Authors
2026 J jnl
TarGene: A Nextflow pipeline for the estimation of genetic effects on human traits via semi-parametric methods.
J. Open Source Softw.
Olivier Labayle, Joshua Slaughter, Breeshey Roskams-Hieter, Kelsey Tetley-Campbell, Mark J. van der Laan, Chris P. Ponting, Ava Khamseh, Sjoerd Viktor Beentjes
2025 J jnl
TMLE.jl: Targeted Minimum Loss-Based Estimation in Julia.
J. Open Source Softw.
Olivier Labayle, Chris P. Ponting, Mark J. van der Laan, Ava Khamseh, Sjoerd Viktor Beentjes
2020 J jnl
Hexa-Longin domain scaffolds for inter-Rab signalling.
Bioinform.
Luis Sánchez-Pulido, Chris P. Ponting
2018 J jnl
TMEM132: an ancient architecture of cohesin and immunoglobulin domains define a new family of neural adhesion molecules.
Bioinform.
Luis Sánchez-Pulido, Chris P. Ponting
2016 J jnl
Vasohibins: new transglutaminase-like cysteine proteases possessing a non-canonical Cys-His-Ser catalytic triad.
Bioinform.
Luis Sánchez-Pulido, Chris P. Ponting
2014 J jnl
CGAT: computational genomics analysis toolkit.
Bioinform.
David Sims, Nicholas E. Ilott, Stephen N. Sansom, Ian M. Sudbery, Jethro S. Johnson, Katherine A. Fawcett, Antonio J. Berlanga-Taylor, Sebastian Luna-Valero, Chris P. Ponting, Andreas Heger
2013 J jnl
GAT: a simulation framework for testing the association of genomic intervals.
Bioinform.
Andreas Heger, Caleb Webber, Martin Goodson, Chris P. Ponting, Gerton Lunter
2013 J jnl
Tiki, at the head of a new superfamily of enzymes.
Bioinform.
Luis Sánchez-Pulido, Chris P. Ponting
2012 J jnl
A common ancestry for BAP1 and Uch37 regulators.
Bioinform.
Luis Sánchez-Pulido, Lesheng Kong, Chris P. Ponting
2011 J jnl
Cdc45: the missing RecJ ortholog in eukaryotes?
Bioinform.
Luis Sánchez-Pulido, Chris P. Ponting
2010 J jnl
Accurate Distinction of Pathogenic from Benign CNVs in Mental Retardation.
PLoS Comput. Biol.
Jayne Y. Hehir-Kwa, Nienke Wieskamp, Caleb Webber, Rolph Pfundt, Han G. Brunner, Christian Gilissen, Bert B. A. de Vries, Chris P. Ponting, Joris A. Veltman
2008 J jnl
OPTIC: orthologous and paralogous transcripts in clades.
Nucleic Acids Res.
Andreas Heger, Chris P. Ponting
2006 J jnl
A novel domain suggests a ciliary function for
Bioinform.
Chris P. Ponting
2006 J jnl
Genome-Wide Identification of Human Functional DNA Using a Neutral Indel Model.
PLoS Comput. Biol.
Gerton Lunter, Chris P. Ponting, Jotun Hein
2006 J jnl
Meisetz and the birth of the KRAB motif.
Bioinform.
Zoë Birtle, Chris P. Ponting
2006 J jnl
Phylogenetic Reconstruction of Orthology, Paralogy, and Conserved Synteny for Dog and Human.
PLoS Comput. Biol.
Leo Goodstadt, Chris P. Ponting
2005 J jnl
InterPro, progress and status in 2005.
Nucleic Acids Res.
Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Paul Bradley, Peer Bork, Phillip Bucher, Lorenzo Cerutti, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Wolfgang Fleischmann, Julian Gough, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Jennifer McDowall, Alex L. Mitchell, Anastasia N. Nikolskaya, Sandra E. Orchard, Marco Pagni, Chris P. Ponting, Emmanuel Quevillon, Jeremy D. Selengut, Christian J. A. Sigrist, Ville Silventoinen, David J. Studholme, Robert Vaughan, Cathy H. Wu
2004 J jnl
SMART 4.0: towards genomic data integration.
Nucleic Acids Res.
Ivica Letunic, Richard R. Copley, Steffen Schmidt, Francesca D. Ciccarelli, Tobias Doerks, Jörg Schultz, Chris P. Ponting, Peer Bork
2003 J jnl
The InterPro Database, 2003 brings increased coverage and new features.
Nucleic Acids Res.
Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Daniel Barrell, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Ujjwal Das, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Sam Griffiths-Jones, Daniel H. Haft, Nicola Harte, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, David Lonsdale, Ville Silventoinen, Sandra E. Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Jeremy D. Selengut, Florence Servant, Christian J. A. Sigrist, Robert Vaughan, Evgeni M. Zdobnov
2002 J jnl
InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites
Briefings Bioinform.
Nicola J. Mulder, Rolf Apweiler, Terri K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Margaret Biswas, Paul Bradley, Peer Bork, Philipp Bucher, Richard R. Copley, Emmanuel Courcelle, Richard Durbin, Laurent Falquet, Wolfgang Fleischmann, Jérôme Gouzy, Sam Griffiths-Jones, Daniel H. Haft, Henning Hermjakob, Nicolas Hulo, Daniel Kahn, Alexander Kanapin, Maria Krestyaninova, Rodrigo Lopez, Ivica Letunic, Sue Orchard, Marco Pagni, David Peyruc, Chris P. Ponting, Florence Servant, Christian J. A. Sigrist
2002 J jnl
Recent improvements to the SMART domain-based sequence annotation resource.
Nucleic Acids Res.
Ivica Letunic, Leo Goodstadt, Nicholas J. Dickens, Tobias Doerks, Jörg Schultz, Richard Mott, Francesca D. Ciccarelli, Richard R. Copley, Chris P. Ponting, Peer Bork
2001 J jnl
CHROMA: consensus-based colouring of multiple alignments for publication.
Bioinform.
Leo Goodstadt, Chris P. Ponting
2001 J jnl
Issues in Predicting Protein Function From Sequence.
Briefings Bioinform.
Chris P. Ponting
2000 J jnl
SMART: a web-based tool for the study of genetically mobile domains.
Nucleic Acids Res.
Jörg Schultz, Richard R. Copley, Tobias Doerks, Chris P. Ponting, Peer Bork
1999 J jnl
IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices.
Bioinform.
Alejandro A. Schäffer, Yuri I. Wolf, Chris P. Ponting, Eugene V. Koonin, L. Aravind, Stephen F. Altschul
1999 J jnl
SMART: identification and annotation of domains from signalling and extracellular protein sequences.
Nucleic Acids Res.
Chris P. Ponting, Jörg Schultz, Frank Milpetz, Peer Bork
1996 J jnl
The helix-hairpin-helix DNA-binding motif: a structural basis for non- sequence-specific recognition of DNA.
Nucleic Acids Res.
Aidan J. Doherty, Louise C. Serpell, Chris P. Ponting