Chikara Furusawa

22 papers Journal 16Unranked 6
YearRankTypeTitle / Venue / Authors
2023 J jnl
Rare-event sampling analysis uncovers the fitness landscape of the genetic code.
PLoS Comput. Biol.
Yuji Omachi, Nen Saito, Chikara Furusawa
2017 J jnl
Metabolic dynamics restricted by conserved carriers: Jamming and feedback.
PLoS Comput. Biol.
Tetsuhiro S. Hatakeyama, Chikara Furusawa
2017 J jnl
SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation.
Bioinform.
Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S. H. Ko, Shigeru B. H. Ko, Norio Gouda, Tetsutaro Hayashi, Itoshi Nikaido
2015 J jnl
Pluripotency, Differentiation, and Reprogramming: A Gene Expression Dynamics Model with Epigenetic Feedback Regulation.
PLoS Comput. Biol.
Tadashi Miyamoto, Chikara Furusawa, Kunihiko Kaneko
2014 J jnl
FastPros: screening of reaction knockout strategies for metabolic engineering.
Bioinform.
Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa
2012 J jnl
An in silico platform for the design of heterologous pathways in nonnative metabolite production.
BMC Bioinform.
Sunisa Chatsurachai, Chikara Furusawa, Hiroshi Shimizu
2010 — conf
Fluctuation-Driven Adaptation and Symbiosis in Cellular Dynamics.
BIONETICS
Chikara Furusawa, Kota Ijichi, Hiroshi Shimizu
2009 J jnl
Analysis of metabolic network based on conservation of molecular structure.
Biosyst.
Tomoharu Hogiri, Chikara Furusawa, Yohei Shinfuku, Naoaki Ono, Hiroshi Shimizu
2009 J jnl
Analysis of stochasticity in promoter activation by using a dual-fluorescence reporter system.
Biosyst.
Jianhong Ou, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu
2009 J jnl
Global/temporal gene expression analysis of Escherichia coli in the early stages of symbiotic relationship development with the cellular slime mold Dictyostelium discoideum.
Biosyst.
Kumiko Kihara, Kotaro Mori, Shingo Suzuki, Naoaki Ono, Chikara Furusawa, Tetsuya Yomo
2009 J jnl
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays.
Bioinform.
Chikara Furusawa, Naoaki Ono, Shingo Suzuki, Tomoharu Agata, Hiroshi Shimizu, Tetsuya Yomo
2008 J jnl
A Generic Mechanism for Adaptive Growth Rate Regulation.
PLoS Comput. Biol.
Chikara Furusawa, Kunihiko Kaneko
2008 — conf
A noise-driven mechanism for adaptive growth rate regulation.
BIONETICS
Chikara Furusawa, Kunihiko Kaneko, Hiroshi Shimizu
2008 J jnl
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.
Bioinform.
Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Tomoharu Agata, Akiko Kashiwagi, Hiroshi Shimizu, Tetsuya Yomo
2008 J jnl
Consistency principle in biological dynamical systems.
Theory Biosci.
Kunihiko Kaneko, Chikara Furusawa
2008 — conf
Metabolic flux balance analysis of an industrially useful microorganism Corynebacerium glutamicum by a genome-scale reconstructed model.
BIONETICS
Hiroshi Shimizu, Yohei Shinfuku, Masahiro Sono, Chikara Furusawa, Takashi Hirasawa
2008 — conf
Quantitative expression analysis using oligonucleotide microarrays based on a physico-chemical model.
BIONETICS
Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Hiroshi Shimizu, Tetsuya Yomo
2007 J jnl
Analysis of fluctuation in protein abundance without promoter regulation based on Escherichia coli continuous culture.
Biosyst.
Tadashi Yamada, Chikara Furusawa, Keisuke Nagahisa, Akiko Kashiwagi, Tetsuya Yomo, Hiroshi Shimizu
2006 — conf
Analysis of Fluctuation in Gene Expression Based on Continuous Culture System.
BioADIT
Tadashi Yamada, Makoto Sadamitsu, Keisuke Nagahisa, Akiko Kashiwagi, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu
2006 — conf
Emergence of Two Power-Laws in Evolution of Biochemical Network; Embedding Abundance Distribution into Topology.
BioADIT
Chikara Furusawa, Kunihiko Kaneko
2000 J jnl
Complex Organization in Multicellularity as a Necessity in EvolutionComplex Organization in Multicellularity as a Necessity in Evolution.
Artif. Life
Chikara Furusawa, Kunihiko Kaneko
1998 J jnl
Emergence of Multicellular Organisms with Dynamic Differentiation and Spatial Pattern.
Artif. Life
Chikara Furusawa, Kunihiko Kaneko