Chengwei Ai

17 papers A* 1Journal 12Unranked 4
YearRankTypeTitle / Venue / Authors
2026 A* conf
PharmaQA: Prompt-Based Molecular Representation Learning via Pharmacophore-Oriented Question Answering.
AAAI
Chengwei Ai, Qiaozhen Meng, Mengwei Sun, Ruihan Dong, Hongpeng Yang, Shiqiang Ma, Xiaoyi Liu, Cheng Liang, Fei Guo
2026 J jnl
Refprogen: a reference-guided molecular generation model with protein-ligand joint representation for property-aware drug design.
Expert Syst. Appl.
Xiaoyi Liu, Na Zhang, Chengwei Ai, Jijun Tang, Fei Guo
2025 J jnl
HyperPhS: a pharmacophore-guided multimodal representation framework for metabolic stability prediction through contrastive hypergraph learning.
Bioinform.
Xiaoyi Liu, Na Zhang, Chenglong Kang, Chengwei Ai, Hongpeng Yang, Jijun Tang, Fei Guo
2025 — conf
MolInterAct: Multiscale Cross-Modal Interaction for Robust Molecular Representation Learning.
BIBM
Mengwei Sun, Chengwei Ai, Diya Zhang, Xiaoyi Liu, Qiaozhen Meng, Shiqiang Ma, Fei Guo
2025 — conf
MultiPepDec: Decoupled Prompt Learning for Multi-Activity Therapeutic Peptides.
BIBM
Xingdan Wang, Diya Zhang, Chengwei Ai, Shiqiang Ma, Qiaozhen Meng, Junwen Duan, Fei Guo
2024 J jnl
A generalizable framework for unlocking missing reactions in genome-scale metabolic networks using deep learning.
CoRR
Xiaoyi Liu, Hongpeng Yang, Chengwei Ai, Ruihan Dong, Yijie Ding, Qianqian Yuan, Jijun Tang, Fei Guo
2024 J jnl
MTMol-GPT: De novo multi-target molecular generation with transformer-based generative adversarial imitation learning.
PLoS Comput. Biol.
Chengwei Ai, Hongpeng Yang, Xiaoyi Liu, Ruihan Dong, Yijie Ding, Fei Guo
2024 J jnl
RetroCaptioner: beyond attention in end-to-end retrosynthesis transformer via contrastively captioned learnable graph representation.
Bioinform.
Xiaoyi Liu, Chengwei Ai, Hongpeng Yang, Ruihan Dong, Jijun Tang, Shuangjia Zheng, Fei Guo
2023 J jnl
Identification of DNA N4-methylcytosine Sites via Multiview Kernel Sparse Representation Model.
IEEE Trans. Artif. Intell.
Chengwei Ai, Prayag Tiwari, Hongpeng Yang, Yijie Ding, Jijun Tang, Fei Guo
2023 J jnl
Low Rank Matrix Factorization Algorithm Based on Multi-Graph Regularization for Detecting Drug-Disease Association.
IEEE ACM Trans. Comput. Biol. Bioinform.
Chengwei Ai, Hongpeng Yang, Yijie Ding, Jijun Tang, Fei Guo
2023 J jnl
MVML-MPI: Multi-View Multi-Label Learning for Metabolic Pathway Inference.
Briefings Bioinform.
Xiaoyi Liu, Hongpeng Yang, Chengwei Ai, Yijie Ding, Fei Guo, Jijun Tang
2022 J jnl
A multi-layer multi-kernel neural network for determining associations between non-coding RNAs and diseases.
Neurocomputing
Chengwei Ai, Hongpeng Yang, Yijie Ding, Jijun Tang, Fei Guo
2022 J jnl
DeepBLI: A Transferable Multichannel Model for Detecting β-Lactamase-Inhibitor Interaction.
J. Chem. Inf. Model.
Ruihan Dong, Hongpeng Yang, Chengwei Ai, Guihua Duan, Jianxin Wang, Fei Guo
2022 J jnl
Microbe-bridged disease-metabolite associations identification by heterogeneous graph fusion.
Briefings Bioinform.
Jitong Feng, Shengbo Wu, Hongpeng Yang, Chengwei Ai, Jianjun Qiao, Junhai Xu, Fei Guo
2022 J jnl
Sparse regularized joint projection model for identifying associations of non-coding RNAs and human diseases.
Knowl. Based Syst.
Ping Li, Prayag Tiwari, Junhai Xu, Yuqing Qian, Chengwei Ai, Yijie Ding, Fei Guo
2020 — conf
A Novel Concolic Execution Approach on Embedded Device.
ICCSP
Chengwei Ai, Weiyu Dong, Zicong Gao
2020 — conf
A Shape-inference-based Approach to Enhance Constraint Independence Optimization.
ICCSP
Jian Lin, Liehui Jiang, Chengwei Ai, Shihong Chao