Chen-Hsiang Yeang

30 papers A 1B 4C 4Misc 2Journal 14Unranked 5
YearRankTypeTitle / Venue / Authors
2025 J jnl
Exploring the Relationship Between the Geometry of a Fixed Embedding of Image Data and Its Underlying Cluster Structure.
J. Comput. Graph. Stat.
Yan-Bin Chen, Khong-Loon Tiong, Chen-Hsiang Yeang
2024 J jnl
Assessing transcriptomic heterogeneity of single-cell RNASeq data by bulk-level gene expression data.
BMC Bioinform.
Khong-Loon Tiong, Dmytro Luzhbin, Chen-Hsiang Yeang
2022 C conf
Clustering image data with a fixed embedding.
ICMLA
Yan-Bin Chen, Khong-Loon Tiong, Chen-Hsiang Yeang
2019 J jnl
MGSEA - a multivariate Gene set enrichment analysis.
BMC Bioinform.
Khong-Loon Tiong, Chen-Hsiang Yeang
2017 J jnl
A quantitative model for the rate-limiting process of UGA alternative assignments to stop and selenocysteine codons.
PLoS Comput. Biol.
Yen-Fu Chen, Hsiu-Chuan Lin, Kai-Neng Chuang, Chih-Hsu Lin, Hsueh-Chi S. Yen, Chen-Hsiang Yeang
2012 J jnl
Markov Random Walk Representations with Continuous Distributions
CoRR
Chen-Hsiang Yeang, Martin Szummer
2012 B conf
Recurrent Structural Motifs Reflect Characteristics of Distinct Networks.
ASONAM
Chen-Hsiang Yeang, Liang-Cheng Huang, Wei-Chung Liu
2011 J jnl
Deciphering causal and statistical relations of molecular aberrations and gene expressions in NCI-60 cell lines.
BMC Syst. Biol.
Shyh-Dar Li, Tatsuaki Tagami, Ying-Fu Ho, Chen-Hsiang Yeang
2010 C conf
A Probabilistic Graphical Model of Quantum Systems.
ICMLA
Chen-Hsiang Yeang
2010 J jnl
An integrated analysis of molecular aberrations in NCI-60 cell lines.
BMC Bioinform.
Chen-Hsiang Yeang
2010 Misc conf
Exact Loopy Belief Propagation on Euler Graphs.
IC-AI
Chen-Hsiang Yeang
2010 C conf
Quantifying the Strength of Natural Selection of a Motif Sequence.
WABI
Chen-Hsiang Yeang
2009 J jnl
A Factor Graph Nested Effects Model To Identify Networks from Genetic Perturbations.
PLoS Comput. Biol.
Charles J. Vaske, Carrie House, Truong Luu, Bryan Frank, Chen-Hsiang Yeang, Norman H. Lee, Joshua M. Stuart
2009 — conf
Analysis of the Bipartite Networks of Domain Compositions and Metabolic Reactions.
BMEI
Chen-Hsiang Yeang
2009 — conf
Evolution of Domain Compositions in the Metabolic Networks of Human and Escherichia Coli.
BIOCOMP
Chen-Hsiang Yeang, Nils A. Baas
2009 Misc conf
Inferring Disease-Related Pathways Using A Probabilistic Epistasis Model.
Pacific Symposium on Biocomputing
Pinal N. Kanabar, Charles J. Vaske, Chen-Hsiang Yeang, Fitnat H. Yildiz, Joshua M. Stuart
2007 J jnl
Detecting Coevolution in and among Protein Domains.
PLoS Comput. Biol.
Chen-Hsiang Yeang, David Haussler
2006 J jnl
A joint model of regulatory and metabolic networks.
BMC Bioinform.
Chen-Hsiang Yeang, Martin Vingron
2006 B conf
Detecting the Dependent Evolution of Biosequences.
RECOMB
Jeremy Darot, Chen-Hsiang Yeang, David Haussler
2006 — conf
Game Theoretic Algorithms for Protein-DNA binding.
NIPS
Luis Pérez-Breva, Luis E. Ortiz, Chen-Hsiang Yeang, Tommi S. Jaakkola
2006 J jnl
Modeling the Combinatorial Functions of Multiple Transcription Factors.
J. Comput. Biol.
Chen-Hsiang Yeang, Tommi S. Jaakkola
2005 B conf
Modeling the Combinatorial Functions of Multiple Transcription Factors.
RECOMB
Chen-Hsiang Yeang, Tommi S. Jaakkola
2005 J jnl
Time Series Analysis of Gene Expression and Location Data.
Int. J. Artif. Intell. Tools
Chen-Hsiang Yeang, Tommi S. Jaakkola
2004 J jnl
Physical Network Models.
J. Comput. Biol.
Chen-Hsiang Yeang, Trey Ideker, Tommi S. Jaakkola
2003 J jnl
An Analytical Method for Multiclass Molecular Cancer Classification.
SIAM Rev.
Ryan M. Rifkin, Sayan Mukherjee, Pablo Tamayo, Sridhar Ramaswamy, Chen-Hsiang Yeang, Michael Angelo, Michael Reich, Tomaso A. Poggio, Eric S. Lander, Todd R. Golub, Jill P. Mesirov
2003 A conf
Markov Random Walk Representations with Continuous Distributions.
UAI
Chen-Hsiang Yeang, Martin Szummer
2003 B conf
Physical network models and multi-source data integration.
RECOMB
Chen-Hsiang Yeang, Tommi S. Jaakkola
2003 C conf
Time Series Analysis of Gene Expression and Location Data.
BIBE
Chen-Hsiang Yeang, Tommi S. Jaakkola
2002 — conf
An Information Geometric Perspective on Active Learning.
ECML
Chen-Hsiang Yeang
2001 — conf
Molecular classification of multiple tumor types.
ISMB (Supplement of Bioinformatics)
Chen-Hsiang Yeang, Sridhar Ramaswamy, Pablo Tamayo, Sayan Mukherjee, Ryan M. Rifkin, Michael Angelo, Michael Reich, Eric S. Lander, Jill P. Mesirov, Todd R. Golub