Charles W. O'Donnell

15 papers A* 1A 1B 2Journal 6Unranked 4
YearRankTypeTitle / Venue / Authors
2014 J jnl
Simultaneous Alignment and Folding of Protein Sequences.
J. Comput. Biol.
Jérôme Waldispühl, Charles W. O'Donnell, Sebastian Will, Srinivas Devadas, Rolf Backofen, Bonnie Berger
2012 A conf
Lynx: A Programmatic SAT Solver for the RNA-Folding Problem.
SAT
Vijay Ganesh, Charles W. O'Donnell, Mate Soos, Srinivas Devadas, Martin C. Rinard, Armando Solar-Lezama
2011 J jnl
A method for probing the mutational landscape of amyloid structure.
Bioinform.
Charles W. O'Donnell, Jérôme Waldispühl, Mieszko Lis, Randal Halfmann, Srinivas Devadas, Susan Lindquist, Bonnie Berger
2011 B conf
Efficient Traversal of Beta-Sheet Protein Folding Pathways Using Ensemble Models.
RECOMB
Solomon Shenker, Charles W. O'Donnell, Srinivas Devadas, Bonnie Berger, Jérôme Waldispühl
2011 J jnl
Efficient Traversal of Beta-Sheet Protein Folding Pathways Using Ensemble Models.
J. Comput. Biol.
Solomon Shenker, Charles W. O'Donnell, Srinivas Devadas, Bonnie Berger, Jérôme Waldispühl
2011 — —
Ensemble modeling of [beta]-sheet proteins.
Charles W. O'Donnell
2009 B conf
Simultaneous Alignment and Folding of Protein Sequences.
RECOMB
Jérôme Waldispühl, Charles W. O'Donnell, Sebastian Will, Srinivas Devadas, Rolf Backofen, Bonnie Berger
2007 J jnl
Aegis: A Single-Chip Secure Processor.
IEEE Des. Test Comput.
G. Edward Suh, Charles W. O'Donnell, Srinivas Devadas
2007 J jnl
Learning biophysically-motivated parameters for alpha helix prediction.
BMC Bioinform.
Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee, Marten van Dijk, Srinivas Devadas
2006 — conf
Predicting Secondary Structure of All-Helical Proteins Using Hidden Markov Support Vector Machines.
PRIB
Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee, Marten van Dijk, Srinivas Devadas
2006 — conf
Virtual monotonic counters and count-limited objects using a TPM without a trusted OS.
STC
Luis F. G. Sarmenta, Marten van Dijk, Charles W. O'Donnell, Jonathan Rhodes, Srinivas Devadas
2005 J jnl
AEGIS: A single-chip secure processor.
Inf. Secur. Tech. Rep.
G. Edward Suh, Charles W. O'Donnell, Srinivas Devadas
2005 A* conf
Design and Implementation of the AEGIS Single-Chip Secure Processor Using Physical Random Functions.
ISCA
G. Edward Suh, Charles W. O'Donnell, Ishan Sachdev, Srinivas Devadas
2004 — conf
Information Leak in the Chord Lookup Protocol.
Peer-to-Peer Computing
Charles W. O'Donnell, Vinod Vaikuntanathan
2003 — conf
On the Existence of Hazard-Free Multi-Level Logic.
ASYNC
Steven M. Nowick, Charles W. O'Donnell