Charles Ofria

137 papers A 19B 1C 25Journal 51Unranked 40
YearRankTypeTitle / Venue / Authors
2026 J jnl
ECLIPSE: An Evolutionary Computation Library for Instrumentation Prototyping in Scientific Engineering.
CoRR
Max Foreback, Evan Imata, Vincent R. Ragusa, Jacob Weiler, Christina Shao, Joey Wagner, Katherine G. Skocelas, Jonathan Sy, Aman Hafez, Wolfgang Banzhaf, Amy Conolly, Kyle R. Helson, Rick Marcusen, Charles Ofria, Marcin Pilinski, Rajiv Ramnath, Bryan Reynolds, Anselmo C. Pontes, Emily L. Dolson, Julie Rolla
2025 A conf
A comparison of tournament and lexicase selection paradigms in regression problems: error-based fitness versus correlation fitness.
GECCO
Illya Bakurov, Aidan Murphy, Charles Ofria, Wolfgang Banzhaf
2025 J jnl
Open Questions about Time and Self-reference in Living Systems.
CoRR
Samson Abramsky, Wolfgang Banzhaf, Leo S. D. Caves, Michael Levin, Penousal Machado, Charles Ofria, Susan Stepney, Roger White
2024 J jnl
Case Study of Novelty, Complexity, and Adaptation in a Multicellular System.
CoRR
Matthew Andres Moreno, Santiago Rodriguez Papa, Charles Ofria
2024 J jnl
Empirical: A scientific software library for research, education, and public engagement.
J. Open Source Softw.
Anya E. Vostinar, Alexander Lalejini, Charles Ofria, Emily L. Dolson, Matthew Andres Moreno
2024 — ed.
Genetic Programming Theory and Practice XX [GPTP 2023]
GPTP
Stephan Winkler, Leonardo Trujillo, Charles Ofria, Ting Hu
2024 — conf
Improving Lexicase Selection with Informed Down-Sampling.
GECCO Companion
Martin Briesch, Ryan Boldi, Dominik Sobania, Alexander Lalejini, Thomas Helmuth, Franz Rothlauf, Charles Ofria, Lee Spector
2024 J jnl
Informed Down-Sampled Lexicase Selection: Identifying Productive Training Cases for Efficient Problem Solving.
Evol. Comput.
Ryan Boldi, Martin Briesch, Dominik Sobania, Alexander Lalejini, Thomas Helmuth, Franz Rothlauf, Charles Ofria, Lee Spector
2023 J jnl
Informed Down-Sampled Lexicase Selection: Identifying productive training cases for efficient problem solving.
CoRR
Ryan Boldi, Martin Briesch, Dominik Sobania, Alexander Lalejini, Thomas Helmuth, Franz Rothlauf, Charles Ofria, Lee Spector
2023 J jnl
Matchmaker, matchmaker, make me a match: geometric, variational, and evolutionary implications of criteria for tag affinity.
Genet. Program. Evolvable Mach.
Matthew Andres Moreno, Alexander Lalejini, Charles Ofria
2023 — conf
Tag Affinity Criteria Influence Adaptive Evolution.
GECCO Companion
Matthew Andres Moreno, Alexander Lalejini, Charles Ofria
2022 J jnl
A suite of diagnostic metrics for characterizing selection schemes.
CoRR
Jose Guadalupe Hernandez, Alexander Lalejini, Charles Ofria
2022 J jnl
Best-Effort Communication Improves Performance and Scales Robustly on Conventional Hardware.
CoRR
Matthew Andres Moreno, Charles Ofria
2022 — conf
Hereditary stratigraphy: genome annotations to enable phylogenetic inference over distributed populations.
GECCO Companion
Matthew Andres Moreno, Emily L. Dolson, Charles Ofria
2022 — conf
Measuring the ability of lexicase selection to find obscure pathways to optimality.
GECCO Companion
Jose Guadalupe Hernandez, Alexander Lalejini, Charles Ofria
2022 — conf
Tag-based module regulation for genetic programming.
GECCO Companion
Alexander Lalejini, Matthew Andres Moreno, Charles Ofria
2022 J jnl
Using the Comparative Hybrid Approach to Disentangle the Role of Substrate Choice on the Evolution of Cognition.
Artif. Life
Clifford Bohm, Sarah Albani, Charles Ofria, Acacia L. Ackles
2022 J jnl
hstrat: a Python Package for phylogenetic inference on distributed digital evolution populations.
J. Open Source Softw.
Matthew Andres Moreno, Emily L. Dolson, Charles Ofria
2021 — conf
An Exploration of Exploration: Measuring the Ability of Lexicase Selection to Find Obscure Pathways to Optimality.
GPTP
Jose Guadalupe Hernandez, Alexander Lalejini, Charles Ofria
2021 J jnl
An Exploration of Exploration: Measuring the ability of lexicase selection to find obscure pathways to optimality.
CoRR
Jose Guadalupe Hernandez, Alexander Lalejini, Charles Ofria
2021 J jnl
Conduit: A C++ Library for Best-effort High Performance Computing.
CoRR
Matthew Andres Moreno, Santiago Rodriguez Papa, Charles Ofria
2021 — conf
Conduit: a C++ library for best-effort high performance computing.
GECCO Companion
Matthew Andres Moreno, Santiago Rodriguez Papa, Charles Ofria
2021 J jnl
Exploring Evolved Multicellular Life Histories in a Open-Ended Digital Evolution System.
CoRR
Matthew Andres Moreno, Charles Ofria
2021 J jnl
Matchmaker, Matchmaker, Make Me a Match: Geometric, Variational, and Evolutionary Implications of Criteria for Tag Affinity.
CoRR
Matthew Andres Moreno, Alexander Lalejini, Charles Ofria
2021 J jnl
SignalGP-Lite: Event Driven Genetic Programming Library for Large-Scale Artificial Life Applications.
CoRR
Matthew Andres Moreno, Santiago Rodriguez Papa, Alexander Lalejini, Charles Ofria
2021 J jnl
Tag-based regulation of modules in genetic programming improves context-dependent problem solving.
Genet. Program. Evolvable Mach.
Alexander Lalejini, Matthew Andres Moreno, Charles Ofria
2021 C conf
The Comparative Hybrid Approach to Investigate Cognition across Substrates.
ALIFE
Sarah Albani, Acacia L. Ackles, Charles Ofria, Clifford Bohm
2020 J jnl
Interpreting the Tape of Life: Ancestry-Based Analyses Provide Insights and Intuition about Evolutionary Dynamics.
Artif. Life
Emily L. Dolson, Alexander Lalejini, Steven Jorgensen, Charles Ofria
2020 C conf
Rank epistasis: A new model for analyzing epistatic interactions in the absence of quantifiable fitness interactions.
ALIFE
Acacia L. Ackles, Austin J. Ferguson, Connor Grady, Charles Ofria
2020 J jnl
Tag-based Genetic Regulation for Genetic Programming.
CoRR
Alexander Lalejini, Matthew Andres Moreno, Charles Ofria
2020 J jnl
The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities.
Artif. Life
Joel Lehman, Jeff Clune, Dusan Misevic, Christoph Adami, Lee Altenberg, Julie Beaulieu, Peter J. Bentley, Samuel Bernard, Guillaume Beslon, David M. Bryson, Nick Cheney, Patryk Chrabaszcz, Antoine Cully, Stéphane Doncieux, Fred C. Dyer, Kai Olav Ellefsen, Robert Feldt, Stephan Fischer, Stephanie Forrest, Antoine Frénoy, Christian Gagné, Léni K. Le Goff, Laura M. Grabowski, Babak Hodjat, Frank Hutter, Laurent Keller, Carole Knibbe, Peter Krcah, Richard E. Lenski, Hod Lipson, Robert MacCurdy, Carlos Maestre, Risto Miikkulainen, Sara Mitri, David E. Moriarty, Jean-Baptiste Mouret, Anh Nguyen, Charles Ofria, Marc Parizeau, David P. Parsons, Robert T. Pennock, William F. Punch, Thomas S. Ray, Marc Schoenauer, Eric Schulte, Karl Sims, Kenneth O. Stanley, François Taddei, Danesh Tarapore, Simon Thibault, Richard A. Watson, Westley Weimer, Jason Yosinski
2019 — conf
Characterizing the Effects of Random Subsampling on Lexicase Selection.
GPTP
Austin J. Ferguson, Jose Guadalupe Hernandez, Daniel Junghans, Alexander Lalejini, Emily L. Dolson, Charles Ofria
2019 C conf
Data Standards for Artificial Life Software.
ALIFE
Alexander Lalejini, Emily L. Dolson, Clifford Bohm, Austin J. Ferguson, David P. Parsons, Penelope Faulkner Rainford, Paul Richmond, Charles Ofria
2019 J jnl
Fluctuating environments select for short-term phenotypic variation leading to long-term exploration.
PLoS Comput. Biol.
Rosangela Canino-Koning, Michael J. Wiser, Charles Ofria
2019 C conf
Horizontal Gene Transfer Leads to Increased Task Acquisition and Genomic Modularity in Digital Organisms.
ALIFE
Michael J. Wiser, Rosangela Canino-Koning, Charles Ofria
2019 — conf
MABE 2.0: an introduction to MABE and a road map for the future of MABE development.
GECCO (Companion)
Clifford Bohm, Alexander Lalejini, Jory Schossau, Charles Ofria
2019 C conf
On Sexual Selection in the Presence of Multiple Costly Displays.
ALIFE
Clifford Bohm, Acacia L. Ackles, Charles Ofria, Arend Hintze
2019 — conf
Random subsampling improves performance in lexicase selection.
GECCO (Companion)
Jose Guadalupe Hernandez, Alexander Lalejini, Emily L. Dolson, Charles Ofria
2019 — conf
Tag-accessed memory for genetic programming.
GECCO (Companion)
Alexander Lalejini, Charles Ofria
2019 J jnl
The MODES Toolbox: Measurements of Open-Ended Dynamics in Evolving Systems.
Artif. Life
Emily L. Dolson, Anya E. Vostinar, Michael J. Wiser, Charles Ofria
2019 J jnl
Toward Open-Ended Fraternal Transitions in Individuality.
Artif. Life
Matthew Andres Moreno, Charles Ofria
2018 — conf
Digital investigations on the evolution of prokaryote photosynthesis regulation: late-breaking abstract.
GECCO (Companion)
Anselmo C. Pontes, Charles Ofria
2018 — conf
Ecological theory provides insights about evolutionary computation.
GECCO (Companion)
Emily L. Dolson, Charles Ofria
2018 J jnl
Ecological theory provides insights about evolutionary computation.
PeerJ Prepr.
Emily L. Dolson, Wolfgang Banzhaf, Charles Ofria
2018 J jnl
Evolving Event-driven Programs with SignalGP.
CoRR
Alexander Lalejini, Charles Ofria
2018 C conf
Evolving Reactive Agents with SignalGP.
ALIFE
Alexander Lalejini, Charles Ofria
2018 A conf
Evolving event-driven programs with SignalGP.
GECCO
Alexander Lalejini, Charles Ofria
2018 J jnl
Evolving reactive agents with SignalGP.
PeerJ Prepr.
Alexander Lalejini, Charles Ofria
2018 — conf
Exploring Genetic Programming Systems with MAP-Elites.
GPTP
Emily L. Dolson, Alexander Lalejini, Charles Ofria
2018 J jnl
Exploring genetic programming systems with MAP-Elites.
PeerJ Prepr.
Emily L. Dolson, Alexander Lalejini, Charles Ofria
2018 A conf
Learning an evolvable genotype-phenotype mapping.
GECCO
Matthew Andres Moreno, Wolfgang Banzhaf, Charles Ofria
2018 C conf
Quantifying the Tape of Life: Ancestry-based Metrics Provide Insights and Intuition about Evolutionary Dynamics.
ALIFE
Emily L. Dolson, Alexander Lalejini, Steven Jorgensen, Charles Ofria
2018 J jnl
Quantifying the tape of life: Ancestry-based metrics provide insights and intuition about evolutionary dynamics.
PeerJ Prepr.
Emily L. Dolson, Alexander Lalejini, Steven Jorgensen, Charles Ofria
2018 C conf
Signals in the Dark: What factors select for the evolution of cooperation controlled by quorum sensing?
ALIFE
Anya E. Vostinar, Jacob Fenton, Chris Waters, Charles Ofria
2018 J jnl
Spatial Structure Can Decrease Symbiotic Cooperation.
Artif. Life
Anya E. Vostinar, Charles Ofria
2018 C conf
Synthesizing Research on the Generation and Maintenance of Population Diversity.
ALIFE
Emily L. Dolson, Charles Ofria
2018 J jnl
The MODES toolbox: Measurements of Open-ended Dynamics in Evolving Systems.
PeerJ Prepr.
Emily L. Dolson, Anya E. Vostinar, Michael J. Wiser, Charles Ofria
2018 J jnl
The Surprising Creativity of Digital Evolution: A Collection of Anecdotes from the Evolutionary Computation and Artificial Life Research Communities.
CoRR
Joel Lehman, Jeff Clune, Dusan Misevic, Christoph Adami, Lee Altenberg, Julie Beaulieu, Peter J. Bentley, Samuel Bernard, Guillaume Beslon, David M. Bryson, Patryk Chrabaszcz, Nick Cheney, Antoine Cully, Stéphane Doncieux, Fred C. Dyer, Kai Olav Ellefsen, Robert Feldt, Stephan Fischer, Stephanie Forrest, Antoine Frénoy, Christian Gagné, Leni K. Le Goff, Laura M. Grabowski, Babak Hodjat, Frank Hutter, Laurent Keller, Carole Knibbe, Peter Krcah, Richard E. Lenski, Hod Lipson, Robert MacCurdy, Carlos Maestre, Risto Miikkulainen, Sara Mitri, David E. Moriarty, Jean-Baptiste Mouret, Anh Nguyen, Charles Ofria, Marc Parizeau, David P. Parsons, Robert T. Pennock, William F. Punch, Thomas S. Ray, Marc Schoenauer, Eric Schulte, Karl Sims, Kenneth O. Stanley, François Taddei, Danesh Tarapore, Simon Thibault, Westley Weimer, Richard A. Watson, Jason Yosinski
2018 J jnl
Toward open-ended fraternal transitions in individuality.
PeerJ Prepr.
Matthew Andres Moreno, Charles Ofria
2018 — conf
Visualizing the tape of life: exploring evolutionary history with virtual reality.
GECCO (Companion)
Emily L. Dolson, Charles Ofria
2018 — conf
What Else Is in an Evolved Name? Exploring Evolvable Specificity with SignalGP.
GPTP
Alexander Lalejini, Charles Ofria
2018 J jnl
What else is in an evolved name? Exploring evolvable specificity with SignalGP.
PeerJ Prepr.
Alexander Lalejini, Charles Ofria
2017 — conf
Applying Ecological Principles to Genetic Programming.
GPTP
Emily L. Dolson, Wolfgang Banzhaf, Charles Ofria
2017 — conf
Gene duplications drive the evolution of complex traits and regulation.
ECAL
Alexander Lalejini, Michael J. Wiser, Charles Ofria
2017 — conf
Improved adaptation in exogenously and endogenously changing environments.
ECAL
Joshua R. Nahum, Jevin West, Benjamin M. Althouse, Luis Zaman, Charles Ofria, Benjamin Kerr
2017 — conf
Investigations into the evolutionary origin of navigation and learning.
ECAL
Anselmo C. Pontes, Ian Whalen, Andrew C. Mitchell, Robert B. Mobley, Fred C. Dyer, Charles Ofria
2017 — conf
Sexual selection promotes ecological speciation in digital organisms.
ECAL
Rosangela Canino-Koning, Jason Keagy, Charles Ofria
2017 — conf
Spatial resource heterogeneity creates local hotspots of evolutionary potential.
ECAL
Emily L. Dolson, Charles Ofria
2017 J jnl
The genotype-phenotype map of an evolving digital organism.
PLoS Comput. Biol.
Miguel A. Fortuna, Luis Zaman, Charles Ofria, Andreas Wagner
2017 — conf
Threshold for cooperation on irregular spatial networks.
ECAL
Michael J. Wiser, Luis Zaman, Brian D. Connelly, Charles Ofria
2016 J jnl
Open-Ended Evolution: Perspectives from the OEE Workshop in York.
Artif. Life
Tim Taylor, Mark A. Bedau, Alastair Channon, David H. Ackley, Wolfgang Banzhaf, Guillaume Beslon, Emily L. Dolson, Tom Froese, Simon J. Hickinbotham, Takashi Ikegami, Barry McMullin, Norman H. Packard, Steen Rasmussen, Nathaniel Virgo, Eran Agmon, Edward Clark, Simon McGregor, Charles Ofria, Glen E. P. Ropella, Lee Spector, Kenneth O. Stanley, Adam Stanton, Christopher Steven Timperley, Anya E. Vostinar, Michael J. Wiser
2016 C conf
The Effects of Evolution and Spatial Structure on Diversity in Biological Reserves.
ALIFE
Charles Ofria, Michael J. Wiser, Emily L. Dolson
2016 C conf
The Evolution of Evolvability: Changing Environments Promote Rapid Adaptation in Digital Organisms.
ALIFE
Charles Ofria, Michael J. Wiser, Rosangela Canino-Koning
2016 C conf
The Evolutionary Origins of Phenotypic Plasticity.
ALIFE
Charles Ofria, Alexander Lalejini
2016 C conf
The Prisoners Dilemma, Memory, and the Early Evolution of Intelligence.
ALIFE
Charles Ofria, Laura M. Grabowski, Joshua R. Nahum, Riley Annis, Emily L. Dolson, Mikaela Leas
2016 J jnl
WebAL Comes of Age: A Review of the First 21 Years of Artificial Life on the Web.
Artif. Life
Tim Taylor, Joshua Evan Auerbach, Josh C. Bongard, Jeff Clune, Simon J. Hickinbotham, Charles Ofria, Mizuki Oka, Sebastian Risi, Kenneth O. Stanley, Jason Yosinski
2016 — conf
What Factors Drive the Evolution of Mutualism?
GECCO (Companion)
Anya E. Vostinar, Luis Zaman, Charles Ofria
2015 — conf
Unraveling the genotype-phenotype map of evolving digital organisms.
ECAL
Miguel A. Fortuna, Luis Zaman, Charles Ofria, Andreas Wagner
2014 C conf
Causes vs Benefits in the Evolution of Prey Grouping.
ALIFE
Ritwik Biswas, David Bryson, Charles Ofria, Aaron Wagner
2014 A conf
The evolution of kin inclusivity levels.
GECCO
Anya Elaine Johnson, Heather J. Goldsby, Sherri Goings, Charles Ofria
2014 A conf
There and back again: gene-processing hardware for the evolution and robotic deployment of robust navigation strategies.
GECCO
David M. Bryson, Aaron P. Wagner, Charles Ofria
2013 J jnl
Distributed Cooperative Caching in Social Wireless Networks.
IEEE Trans. Mob. Comput.
Mahmoud Taghizadeh, Kristopher K. Micinski, Subir Biswas, Charles Ofria, Eric Torng
2013 J jnl
Evolving Digital Ecological Networks.
PLoS Comput. Biol.
Miguel A. Fortuna, Luis Zaman, Aaron P. Wagner, Charles Ofria
2013 — conf
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes.
GECCO (Companion)
Jeff Clune, Dusan Misevic, Charles Ofria, Richard E. Lenski, Santiago F. Elena, Rafael Sanjuán
2013 J jnl
Understanding Evolutionary Potential in Virtual CPU Instruction Set Architectures.
CoRR
David M. Bryson, Charles Ofria
2012 C conf
An ecology-based evolutionary algorithm to evolve solutions to complex problems.
ALIFE
Sherri Goings, Heather Goldsby, Betty H. C. Cheng, Charles Ofria
2012 C conf
Digital Evolution Exhibits Surprising Robustness to Poor Design Decisions.
ALIFE
David M. Bryson, Charles Ofria
2012 C conf
Evolutionary Potential is Maximized at Intermediate Diversity Levels.
ALIFE
Bess L. Walker, Charles Ofria
2012 C conf
Finger-painting Fitness Landscapes: An Interactive Tool for Exploring Complex Evolutionary Dynamics.
ALIFE
Luis Zaman, Charles Ofria, Richard E. Lenski
2012 C ed.
Proceedings of the Thirteenth International Conference on the Simulation and Synthesis of Living Systems, ALIFE 2012, East Lansing, Michigan, USA, July 19-22, 2012
ALIFE
Christoph Adami, David M. Bryson, Charles Ofria, Robert T. Pennock
2012 C conf
The Evolution of Temporal Polyethism.
ALIFE
Heather Goldsby, Neem Serra, Fred C. Dyer, Benjamin Kerr, Charles Ofria
2011 — conf
Clever creatures: Case studies of evolved digital organisms.
ECAL
Laura M. Grabowski, David M. Bryson, Fred C. Dyer, Robert T. Pennock, Charles Ofria
2011 — conf
Digital sex: Causes and consequences.
ECAL
Dusan Misevic, Charles Ofria, Richard E. Lenski
2011 A conf
Modeling the evolutionary dynamics of plasmids in spatial populations.
GECCO
Brian D. Connelly, Luis Zaman, Philip K. McKinley, Charles Ofria
2011 — conf
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes.
ECAL
Jeff Clune, Dusan Misevic, Charles Ofria, Richard E. Lenski, Santiago F. Elena, Rafael Sanjuán
2011 J jnl
On the Performance of Indirect Encoding Across the Continuum of Regularity.
IEEE Trans. Evol. Comput.
Jeff Clune, Kenneth O. Stanley, Robert T. Pennock, Charles Ofria
2011 A conf
Rapid host-parasite coevolution drives the production and maintenance of diversity in digital organisms.
GECCO
Luis Zaman, Suhas Devangam, Charles Ofria
2011 — conf
Selective pressures for accurate altruism targeting: evidence from digital evolution for difficult-to-test aspects of inclusive fitness theory.
ECAL
Jeff Clune, Heather J. Goldsby, Charles Ofria, Robert T. Pennock
2010 — conf
Digital evolution with avida.
GECCO (Companion)
Benjamin E. Beckmann, Jeff Clune, Charles Ofria
2010 C conf
Early Evolution of Memory Usage in Digital Organisms.
ALIFE
Laura M. Grabowski, David M. Bryson, Fred C. Dyer, Charles Ofria, Robert T. Pennock
2010 A conf
Evolution of division of labor in genetically homogenous groups.
GECCO
Heather Goldsby, David B. Knoester, Charles Ofria
2010 A conf
Investigating whether hyperNEAT produces modular neural networks.
GECCO
Jeff Clune, Benjamin E. Beckmann, Philip K. McKinley, Charles Ofria
2010 C conf
Social Structure and the Maintenance of Biodiversity.
ALIFE
Brian D. Connelly, Luis Zaman, Charles Ofria, Philip K. McKinley
2009 C conf
Applying digital evolution to the design of self-adaptive software.
ALIFE
Benjamin E. Beckmann, Laura M. Grabowski, Philip K. McKinley, Charles Ofria
2009 C conf
Cockroaches, drunkards, and climbers: Modeling the evolution of simple movement strategies using digital organisms.
ALIFE
Wesley R. Elsberry, Laura M. Grabowski, Charles Ofria, Robert T. Pennock
2009 C conf
Ecological approaches to diversity maintenance in evolutionary algorithms.
ALIFE
Sherri Goings, Charles Ofria
2009 B conf
Evolving coordinated quadruped gaits with the HyperNEAT generative encoding.
IEEE Congress on Evolutionary Computation
Jeff Clune, Benjamin E. Beckmann, Charles Ofria, Robert T. Pennock
2009 — conf
HybrID: A Hybridization of Indirect and Direct Encodings for Evolutionary Computation.
ECAL (2)
Jeff Clune, Benjamin E. Beckmann, Robert T. Pennock, Charles Ofria
2009 A conf
Problem decomposition using indirect reciprocity in evolved populations.
GECCO
Heather Goldsby, Sherri Goings, Jeff Clune, Charles Ofria
2009 — conf
The Evolution of Division of Labor.
ECAL (2)
Heather Goldsby, David B. Knoester, Jeff Clune, Philip K. McKinley, Charles Ofria
2009 A conf
The sensitivity of HyperNEAT to different geometric representations of a problem.
GECCO
Jeff Clune, Charles Ofria, Robert T. Pennock
2008 — conf
Autonomic Software Development Methodology Based on Darwinian Evolution.
ICAC
Benjamin E. Beckmann, Laura M. Grabowski, Philip K. McKinley, Charles Ofria
2008 A conf
Cooperative network construction using digital germlines.
GECCO
David B. Knoester, Philip K. McKinley, Charles Ofria
2008 — conf
Digital Evolution of Behavioral Models for Autonomic Systems.
ICAC
Heather Goldsby, Betty H. C. Cheng, Philip K. McKinley, David B. Knoester, Charles Ofria
2008 J jnl
Harnessing Digital Evolution.
Computer
Philip K. McKinley, Betty H. C. Cheng, Charles Ofria, David B. Knoester, Benjamin E. Beckmann, Heather Goldsby
2008 A conf
How a Generative Encoding Fares as Problem-Regularity Decreases.
PPSN
Jeff Clune, Charles Ofria, Robert T. Pennock
2008 A conf
How generative encodings fare on less regular problems.
GECCO
Jeff Clune, Charles Ofria, Robert T. Pennock
2008 J jnl
Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes.
PLoS Comput. Biol.
Jeff Clune, Dusan Misevic, Charles Ofria, Richard E. Lenski, Santiago F. Elena, Rafael Sanjuán
2008 J jnl
On the Gradual Evolution of Complexity and the Sudden Emergence of Complex Features.
Artif. Life
Charles Ofria, Wei Huang, Eric Torng
2008 A conf
On the evolution of motility and intelligent tactic response.
GECCO
Laura M. Grabowski, Wesley R. Elsberry, Charles Ofria, Robert T. Pennock
2008 A conf
Selection for group-level efficiency leads to self-regulation of population size.
GECCO
Benjamin E. Beckmann, Philip K. McKinley, Charles Ofria
2007 A conf
Digitally Evolving Models for Dynamically Adaptive Systems.
SEAMS
Heather Goldsby, David B. Knoester, Betty H. C. Cheng, Philip K. McKinley, Charles Ofria
2007 — conf
Directed Evolution of Communication and Cooperation in Digital Organisms.
ECAL
David B. Knoester, Philip K. McKinley, Benjamin E. Beckmann, Charles Ofria
2007 — conf
Evolution of Cooperative Information Gathering in Self-Replicating Digital Organisms.
SASO
Benjamin E. Beckmann, Philip K. McKinley, David B. Knoester, Charles Ofria
2007 — conf
Evolution of an Adaptive Sleep Response in Digital Organisms.
ECAL
Benjamin E. Beckmann, Philip K. McKinley, Charles Ofria
2007 — conf
Investigating the Emergence of Phenotypic Plasticity in Evolving Digital Organisms.
ECAL
Jeff Clune, Charles Ofria, Robert T. Pennock
2007 A conf
Using group selection to evolve leadership in populations of self-replicating digital organisms.
GECCO
David B. Knoester, Philip K. McKinley, Charles Ofria
2004 J jnl
Avida: A Software Platform for Research in Computational Evolutionary Biology.
Artif. Life
Charles Ofria, Claus O. Wilke
2004 J jnl
Using Avida to Test the Effects of Natural Selection on Phylogenetic Reconstruction Methods.
Artif. Life
George I. Hagstrom, Dehua H. Hang, Charles Ofria, Eric Torng
2003 J jnl
Selective pressures on genomes in molecular evolution
CoRR
Charles Ofria, Christoph Adami, Travis C. Collier
2003 A conf
The Effect of Natural Selection on Phylogeny Reconstruction Algorithms.
GECCO
Dehua H. Hang, Charles Ofria, Thomas M. Schmidt, Eric Torng
2002 J jnl
Design of evolvable computer languages.
IEEE Trans. Evol. Comput.
Charles Ofria, Christoph Adami, Travis C. Collier
2000 J jnl
Evolution of Biological Complexity
CoRR
Christoph Adami, Charles Ofria, Travis C. Collier
2000 J jnl
Evolution of biological complexity.
Proc. Natl. Acad. Sci. USA
Christoph Adami, Charles Ofria, Travis C. Collier
2000 J jnl
Evolution of differentiated expression patterns in digital organisms
CoRR
Charles Ofria, Christoph Adami, Travis C. Collier, Grace K. Hsu
1999 — conf
Evolution of Differentiated Expression Patterns in Digital Organisms.
ECAL
Charles Ofria, Christoph Adami, Travis C. Collier, Grace K. Hsu
1999 J jnl
Evolution of genetic organization in digital organisms
CoRR
Charles Ofria, Christoph Adami