Charles M. Perou

15 papers Journal 12Unranked 3
YearRankTypeTitle / Venue / Authors
2021 J jnl
SCDC: bulk gene expression deconvolution by multiple single-cell RNA sequencing references.
Briefings Bioinform.
Meichen Dong, Aatish Thennavan, Eugene Urrutia, Yun Li, Charles M. Perou, Fei Zou, Yuchao Jiang
2020 J jnl
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: comparison of gene expression profiling approaches.
BMC Bioinform.
Arran K. Turnbull, Cigdem Selli, Carlos Martinez-Perez, Anu Fernando, Lorna Renshaw, Jane Keys, Jonine Figueroa, Xiaping He, Maki Tanioka, Alison F. Munro, Lee Murphy, Angie Fawkes, Richard Clark, Audrey Coutts, Charles M. Perou, Lisa A. Carey, Michael J. Dixon, Andrew H. Sims
2019 J jnl
Deep Multi-View Learning via Task-Optimal CCA.
CoRR
Heather D. Couture, Roland Kwitt, J. S. Marron, Melissa A. Troester, Charles M. Perou, Marc Niethammer
2019 J jnl
Improved indel detection in DNA and RNA via realignment with ABRA2.
Bioinform.
Lisle E. Mose, Charles M. Perou, Joel S. Parker
2018 — conf
Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology.
MICCAI (2)
Heather D. Couture, J. S. Marron, Charles M. Perou, Melissa A. Troester, Marc Niethammer
2018 J jnl
Multiple Instance Learning for Heterogeneous Images: Training a CNN for Histopathology.
CoRR
Heather D. Couture, J. S. Marron, Charles M. Perou, Melissa A. Troester, Marc Niethammer
2018 J jnl
Receiver Operating Characteristic Curves and Confidence Bands for Support Vector Machines.
CoRR
Daniel J. Luckett, Eric B. Laber, Samer S. El-Kamary, Cheng Fan, Ravi Jhaveri, Charles M. Perou, Fatma M. Shebl, Michael R. Kosorok
2016 J jnl
Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V'DJer.
Bioinform.
Lisle E. Mose, Sara R. Selitsky, Lisa M. Bixby, David L. Marron, Michael D. Iglesia, Jonathan S. Serody, Charles M. Perou, Benjamin Vincent, Joel S. Parker
2015 — conf
Hierarchical task-driven feature learning for tumor histology.
ISBI
Heather D. Couture, J. S. Marron, Nancy E. Thomas, Charles M. Perou, Marc Niethammer
2014 J jnl
ABRA: improved coding indel detection via assembly-based realignment.
Bioinform.
Lisle E. Mose, Matthew D. Wilkerson, D. Neil Hayes, Charles M. Perou, Joel S. Parker
2014 — conf
Topological Descriptors of Histology Images.
MLMI
Nikhil Singh, Heather D. Couture, J. S. Marron, Charles M. Perou, Marc Niethammer
2012 J jnl
ReQON: a Bioconductor package for recalibrating quality scores from next-generation sequencing data.
BMC Bioinform.
Christopher R. Cabanski, Keary Cavin, Chris Bizon, Matthew D. Wilkerson, Joel S. Parker, Kirk C. Wilhelmsen, Charles M. Perou, J. S. Marron, D. Neil Hayes
2008 J jnl
Merging two gene-expression studies via cross-platform normalization.
Bioinform.
Andrey A. Shabalin, Håkon Tjelmeland, Cheng Fan, Charles M. Perou, Andrew B. Nobel
2007 J jnl
Clustering microarray-derived gene lists through implicit literature relationships.
Bioinform.
Mark F. Burkart, Jonathan D. Wren, Jason I. Herschkowitz, Charles M. Perou, Harold R. Garner
2004 J jnl
Adjustment of systematic microarray data biases.
Bioinform.
Mónica Benito, Joel S. Parker, Quan Du, Junyuan Wu, Dong Xiang, Charles M. Perou, James Stephen Marron