Charles Christoffer

14 papers Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2022 J jnl
SHREC 2022: Protein-ligand binding site recognition.
Comput. Graph.
Luca Gagliardi, Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Hao Huang, Boulbaba Ben Amor, Yi Fang, Yuanyuan Zhang, Xiao Wang, Charles Christoffer, Daisuke Kihara, Apostolos Axenopoulos, Stelios K. Mylonas, Petros Daras
2021 J jnl
LZerD webserver for pairwise and multiple protein-protein docking.
Nucleic Acids Res.
Charles Christoffer, Siyang Chen, Vijay Bharadwaj, Tunde Aderinwale, Vidhur Kumar, Matin Hormati, Daisuke Kihara
2021 J jnl
SHREC 2021: Retrieval and classification of protein surfaces equipped with physical and chemical properties.
Comput. Graph.
Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Yonghuai Liu, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Evangelia I. Zacharaki, Eleftheria Psatha, Dimitrios Laskos, Gerasimos Arvanitis, Konstantinos Moustakas, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Daisuke Kihara, Andrea Giachetti, Huu-Nghia Nguyen, Tuan-Duy Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le-Thanh, Hai-Dang Nguyen, Minh-Triet Tran
2021 — conf
SHREC 2021: Surface-based Protein Domains Retrieval.
3DOR
Florent Langenfeld, Tunde Aderinwale, Charles Christoffer, Woong-Hee Shin, Genki Terashi, Xiao Wang, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Ekpo Otu, Reyer Zwiggelaar, David Hunter, Yonghuai Liu, Léa Sirugue, Huu-Nghia H. Nguyen, Tuan-Duy H. Nguyen, Vinh-Thuyen Nguyen-Truong, Danh Le, Hai-Dang Nguyen, Minh-Triet Tran, Matthieu Montès
2020 — ch.
Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes.
Protein-Protein Interaction Networks
Genki Terashi, Charles Christoffer, Daisuke Kihara
2020 J jnl
Protein docking model evaluation by 3D deep convolutional neural networks.
Bioinform.
Xiao Wang, Genki Terashi, Charles Christoffer, Mengmeng Zhu, Daisuke Kihara
2020 J jnl
SHREC 2020: Multi-domain protein shape retrieval challenge.
Comput. Graph.
Florent Langenfeld, Yuxu Peng, Yu-Kun Lai, Paul L. Rosin, Tunde Aderinwale, Genki Terashi, Charles Christoffer, Daisuke Kihara, Halim Benhabiles, Karim Hammoudi, Adnane Cabani, Féryal Windal, Mahmoud Melkemi, Andrea Giachetti, Stelios K. Mylonas, Apostolos Axenopoulos, Petros Daras, Ekpo Otu, Matthieu Montès
2019 J jnl
A global map of the protein shape universe.
PLoS Comput. Biol.
Xusi Han, Atilla Sit, Charles Christoffer, Siyang Chen, Daisuke Kihara
2019 — ch.
Study of the Variability of the Native Protein Structure.
Encyclopedia of Bioinformatics and Computational Biology (3)
Xusi Han, Woong-Hee Shin, Charles Christoffer, Genki Terashi, Lyman Monroe, Daisuke Kihara
2018 J jnl
Modeling the assembly order of multimeric heteroprotein complexes.
PLoS Comput. Biol.
Lenna X. Peterson, Yoichiro Togawa, Juan Esquivel-Rodríguez, Genki Terashi, Charles Christoffer, Amitava Roy, Woong-Hee Shin, Daisuke Kihara
2017 J jnl
Modeling disordered protein interactions from biophysical principles.
PLoS Comput. Biol.
Lenna X. Peterson, Amitava Roy, Charles Christoffer, Genki Terashi, Daisuke Kihara
2017 — conf
Protein Shape Retrieval.
3DOR@Eurographics
Na Song, Daniela Craciun, Charles Christoffer, Xusi Han, Daisuke Kihara, Guillaume Levieux, Matthieu Montès, Hong Qin, Pranjal Sahu, Genki Terashi, Haiguang Liu
2016 J jnl
PL-PatchSurfer2: Improved Local Surface Matching-Based Virtual Screening Method That Is Tolerant to Target and Ligand Structure Variation.
J. Chem. Inf. Model.
Woong-Hee Shin, Charles Christoffer, Ji-Bo Wang, Daisuke Kihara
2015 J jnl
Navigating 3D electron microscopy maps with EM-SURFER.
BMC Bioinform.
Juan Esquivel-Rodríguez, Yi Xiong, Xusi Han, Shuomeng Guang, Charles Christoffer, Daisuke Kihara