Chaohao Yuan

15 papers A* 2A 1B 1Journal 10Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
IBCircuit: Towards Holistic Circuit Discovery with Information Bottleneck.
CoRR
Tian Bian, Yifan Niu, Chaohao Yuan, Chengzhi Piao, Bingzhe Wu, Long-Kai Huang, Yu Rong, Tingyang Xu, Hong Cheng, Jia Li
2026 J jnl
Lingshu-Cell: A generative cellular world model for transcriptome modeling toward virtual cells.
CoRR
Han Zhang, Guo-Hua Yuan, Chaohao Yuan, Tingyang Xu, Tian Bian, Hong Cheng, Wenbing Huang, Deli Zhao, Yu Rong
2026 A conf
ParaFormer: A Generalized PageRank Graph Transformer for Graph Representation Learning.
WSDM
Chaohao Yuan, Zhenjie Song, Ercan Engin Kuruoglu, Kangfei Zhao, Yang Liu, Deli Zhao, Hong Cheng, Yu Rong
2026 J jnl
Unifying structural proximity and equivalence for enhanced dynamic network embedding.
Expert Syst. Appl.
Suchanuch Piriyasatit, Chaohao Yuan, Ercan Engin Kuruoglu
2025 J jnl
A Survey of Graph Transformers: Architectures, Theories and Applications.
CoRR
Chaohao Yuan, Kangfei Zhao, Ercan Engin Kuruoglu, Liang Wang, Tingyang Xu, Wenbing Huang, Deli Zhao, Hong Cheng, Yu Rong
2025 B conf
ASD Classification on Dynamic Brain Connectome using Temporal Random Walk with Transformer-based Dynamic Network Embedding.
IJCNN
Suchanuch Piriyasatit, Chaohao Yuan, Ercan Engin Kuruoglu
2025 J jnl
ASD Classification on Dynamic Brain Connectome using Temporal Random Walk with Transformer-based Dynamic Network Embedding.
CoRR
Suchanuch Piriyasatit, Chaohao Yuan, Ercan Engin Kuruoglu
2025 — conf
Annotation-guided Protein Design with Multi-Level Domain Alignment.
KDD (1)
Chaohao Yuan, Songyou Li, Geyan Ye, Yikun Zhang, Long-Kai Huang, Wenbing Huang, Wei Liu, Jianhua Yao, Yu Rong
2025 A* conf
Atomas: Hierarchical Adaptive Alignment on Molecule-Text for Unified Molecule Understanding and Generation.
ICLR
Yikun Zhang, Geyan Ye, Chaohao Yuan, Bo Han, Long-Kai Huang, Jianhua Yao, Wei Liu, Yu Rong
2025 A* conf
IBCircuit: Towards Holistic Circuit Discovery with Information Bottleneck.
ICML
Tian Bian, Yifan Niu, Chaohao Yuan, Chengzhi Piao, Bingzhe Wu, Long-Kai Huang, Yu Rong, Tingyang Xu, Hong Cheng, Jia Li
2025 J jnl
ParaFormer: A Generalized PageRank Graph Transformer for Graph Representation Learning.
CoRR
Chaohao Yuan, Zhenjie Song, Ercan Engin Kuruoglu, Kangfei Zhao, Yang Liu, Deli Zhao, Hong Cheng, Yu Rong
2025 J jnl
Unifying Structural Proximity and Equivalence for Enhanced Dynamic Network Embedding.
CoRR
Suchanuch Piriyasatit, Chaohao Yuan, Ercan Engin Kuruoglu
2024 J jnl
Atomas: Hierarchical Alignment on Molecule-Text for Unified Molecule Understanding and Generation.
CoRR
Yikun Zhang, Geyan Ye, Chaohao Yuan, Bo Han, Long-Kai Huang, Jianhua Yao, Wei Liu, Yu Rong
2024 J jnl
Functional Protein Design with Local Domain Alignment.
CoRR
Chaohao Yuan, Songyou Li, Geyan Ye, Yikun Zhang, Long-Kai Huang, Wenbing Huang, Wei Liu, Jianhua Yao, Yu Rong
2022 J jnl
Distilling Causal Metaknowledge from Knowledge Graphs.
IEEE Data Eng. Bull.
Yuan Meng, Yancheng Dong, Shixuan Liu, Chaohao Yuan, Yue He, Jian Pei, Peng Cui