Chad L. Myers

27 papers A* 1Misc 1Journal 22Unranked 3
YearRankTypeTitle / Venue / Authors
2021 J jnl
Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions.
J. Chem. Inf. Model.
Hamid Safizadeh, Scott W. Simpkins, Justin Nelson, Sheena C. Li, Jeff S. Piotrowski, Mami Yoshimura, Yoko Yashiroda, Hiroyuki Hirano, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
2018 J jnl
MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action.
Bioinform.
Justin Nelson, Scott W. Simpkins, Hamid Safizadeh, Sheena C. Li, Jeff S. Piotrowski, Hiroyuki Hirano, Yoko Yashiroda, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
2018 J jnl
Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interactions.
PLoS Comput. Biol.
Scott W. Simpkins, Justin Nelson, Raamesh Deshpande, Sheena C. Li, Jeff S. Piotrowski, Erin H. Wilson, Abraham A. Gebre, Hamid Safizadeh, Reika Okamoto, Mami Yoshimura, Michael Costanzo, Yoko Yashiroda, Yoshikazu Ohya, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers
2014 J jnl
Analysis of Barcode sequence features to find anomalies due to amplification Bias.
CoRR
Chandrima Sarkar, Raamesh Deshpande, Chad L. Myers
2013 J jnl
Distinct Types of Disorder in the Human Proteome: Functional Implications for Alternative Splicing.
PLoS Comput. Biol.
Recep Colak, TaeHyung Kim, Magali Michaut, Mark G. F. Sun, Manuel Irimia, Jeremy Bellay, Chad L. Myers, Benjamin J. Blencowe, Philip M. Kim
2013 J jnl
SGAtools: one-stop analysis and visualization of array-based genetic interaction screens.
Nucleic Acids Res.
Omar Wagih, Matej Usaj, Anastasia Baryshnikova, Benjamin VanderSluis, Elena Kuzmin, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Leopold Parts
2011 J jnl
Protein Complexes are Central in the Yeast Genetic Landscape.
PLoS Comput. Biol.
Magali Michaut, Anastasia Baryshnikova, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Gary D. Bader
2010 J jnl
A Scalable Approach for Discovering Conserved Active Subnetworks across Species.
PLoS Comput. Biol.
Raamesh Deshpande, Shikha Sharma, Catherine M. Verfaillie, Wei-Shou Hu, Chad L. Myers
2010 J jnl
An Integrative Multi-Network and Multi-Classifier Approach to Predict Genetic Interactions.
PLoS Comput. Biol.
Gaurav Pandey, Bin Zhang, Aaron N. Chang, Chad L. Myers, Jun Zhu, Vipin Kumar, Eric E. Schadt
2010 J jnl
DRYGIN: a database of quantitative genetic interaction networks in yeast.
Nucleic Acids Res.
Judice L. Y. Koh, Huiming Ding, Michael Costanzo, Anastasia Baryshnikova, Kiana Toufighi, Gary D. Bader, Chad L. Myers, Brenda J. Andrews, Charles Boone
2010 Misc conf
Subspace Differential Coexpression Analysis: Problem Definition and a General Approach.
Pacific Symposium on Biocomputing
Gang Fang, Rui Kuang, Gaurav Pandey, Michael S. Steinbach, Chad L. Myers, Vipin Kumar
2009 A* conf
An association analysis approach to biclustering.
KDD
Gaurav Pandey, Gowtham Atluri, Michael S. Steinbach, Chad L. Myers, Vipin Kumar
2009 — conf
Characterization of systems-level organization through mining large-scale genetic interaction networks.
GENSiPS
Jeremy Bellay, Benjamin VanderSluis, Yungil Kim, Sunayan Bandyopadhyay, Chad L. Myers
2009 J jnl
Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis.
PLoS Comput. Biol.
Matthew A. Hibbs, Chad L. Myers, Curtis Huttenhower, David C. Hess, Kai Li, Amy A. Caudy, Olga G. Troyanskaya
2009 J jnl
Incorporating functional inter-relationships into protein function prediction algorithms.
BMC Bioinform.
Gaurav Pandey, Chad L. Myers, Vipin Kumar
2009 J jnl
The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction.
Bioinform.
Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Amy A. Caudy, David C. Hess, Olga G. Troyanskaya
2008 J jnl
A Genomewide Functional Network for the Laboratory Mouse.
PLoS Comput. Biol.
Yuanfang Guan, Chad L. Myers, Rong Lu, Ihor Lemischka, Carol J. Bult, Olga G. Troyanskaya
2007 J jnl
Context-sensitive data integration and prediction of biological networks.
Bioinform.
Chad L. Myers, Olga G. Troyanskaya
2007 J jnl
Exploring the functional landscape of gene expression: directed search of large microarray compendia.
Bioinform.
Matthew A. Hibbs, David C. Hess, Chad L. Myers, Curtis Huttenhower, Kai Li, Olga G. Troyanskaya
2007 J jnl
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods.
BMC Bioinform.
Curtis Huttenhower, Avi I. Flamholz, Jessica N. Landis, Sauhard Sahi, Chad L. Myers, Kellen L. Olszewski, Matthew A. Hibbs, Nathan O. Siemers, Olga G. Troyanskaya, Hilary A. Coller
2006 J jnl
A scalable method for integration and functional analysis of multiple microarray datasets.
Bioinform.
Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Olga G. Troyanskaya
2006 J jnl
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool.
BMC Bioinform.
Rachel S. G. Sealfon, Matthew A. Hibbs, Curtis Huttenhower, Chad L. Myers, Olga G. Troyanskaya
2005 J jnl
A recursive QR approach to adaptive equalization of time-varying MIMO channels.
Commun. Inf. Syst.
Sun-Yuan Kung, Chad L. Myers, Xinying Zhang
2005 J jnl
Visualization-based discovery and analysis of genomic aberrations in microarray data.
BMC Bioinform.
Chad L. Myers, Xing Chen, Olga G. Troyanskaya
2004 — conf
A recursive QR approach to semi-blind equalization of time-varying MIMO channels.
ICASSP (4)
Sun-Yuan Kung, Chad L. Myers, Xinying Zhang
2004 J jnl
Accurate detection of aneuploidies in array CGH and gene expression microarray data.
Bioinform.
Chad L. Myers, Maitreya J. Dunham, Sun-Yuan Kung, Olga G. Troyanskaya
2004 — conf
Cross-weighted Fisher discriminant analysis for visualization of DNA microarray data.
ICASSP (5)
Xinying Zhang, Chad L. Myers, Sun-Yuan Kung