Cesim Erten - RankMe

43 papers A 8B 2Misc 2Journal 26Unranked 5

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	SCITUNA: single-cell data integration tool using network alignment. BMC Bioinform. Aissa Houdjedj, Yacine Marouf, Mekan Myradov, Süleyman Onur Dogan, Burak Onur Erten, Oznur Tastan, Cesim Erten, Hilal Kazan
2024	J	`jnl`	Size Should not Matter: Scale-invariant Stress Metrics. CoRR Abu Reyan Ahmed, Cesim Erten, Stephen G. Kobourov, Jonah Lotz, Jacob Miller, Hamlet Taraz
2023	J	`jnl`	Predator: Predicting the Impact of Cancer Somatic Mutations on Protein-Protein Interactions. IEEE ACM Trans. Comput. Biol. Bioinform. Ibrahim Berber, Cesim Erten, Hilal Kazan
2022	J	`jnl`	PersonaDrive: a method for the identification and prioritization of personalized cancer drivers. Bioinform. Cesim Erten, Aissa Houdjedj, Hilal Kazan, Ahmed Amine Taleb Bahmed
2021	J	`jnl`	Ranking cancer drivers via betweenness-based outlier detection and random walks. BMC Bioinform. Cesim Erten, Aissa Houdjedj, Hilal Kazan
2020	J	`jnl`	MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules. Bioinform. Rafsan Ahmed, Ilyes Baali, Cesim Erten, Evis Hoxha, Hilal Kazan
2019	J	`jnl`	Structure of conflict graphs in constraint alignment problems and algorithms. Discret. Math. Theor. Comput. Sci. Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten
2017	J	`jnl`	RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications. Bioinform. Ferhat Alkan, Cesim Erten
2015	J	`jnl`	SiPAN: simultaneous prediction and alignment of protein-protein interaction networks. Bioinform. Ferhat Alkan, Cesim Erten
2014	J	`jnl`	BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks. Bioinform. Ferhat Alkan, Cesim Erten
2014	J	`jnl`	Constrained Alignments of a Pair of Graphs. CoRR Ferhat Alkan, Türker Bíyíkoglu, Marc Demange, Cesim Erten
2013	J	`jnl`	CAMPways: constrained alignment framework for the comparative analysis of a pair of metabolic pathways. Bioinform. Gamze Abaka, Türker Bíyíkoglu, Cesim Erten
2013	J	`jnl`	SPINAL: scalable protein interaction network alignment. Bioinform. Ahmet Emre Aladag, Cesim Erten
2011	J	`jnl`	Colored Simultaneous Geometric Embeddings and Universal Pointsets. Algorithmica Ulrik Brandes, Cesim Erten, Alejandro Estrella-Balderrama, J. Joseph Fowler, Fabrizio Frati, Markus Geyer, Carsten Gutwenger, Seok-Hee Hong, Michael Kaufmann, Stephen G. Kobourov, Giuseppe Liotta, Petra Mutzel, Antonios Symvonis
2011	J	`jnl`	Reliability-Oriented bioinformatic networks visualization. Bioinform. Ahmet Emre Aladag, Cesim Erten, Melih Sözdinler
2010	J	`jnl`	Force-directed approaches to sensor localization. ACM Trans. Sens. Networks Alon Efrat, David Forrester, Anand Iyer, Stephen G. Kobourov, Cesim Erten, Ozan Kilic
2010	J	`jnl`	Fully Decentralized and Collaborative Multilateration Primitives for Uniquely Localizing WSNs. EURASIP J. Wirel. Commun. Netw. Arda Cakiroglu, Cesim Erten
2010	J	`jnl`	Improving performances of suboptimal greedy iterative biclustering heuristics via localization. Bioinform. Cesim Erten, Melih Sözdinler
2009	—	`conf`	A robust localization framework to handle noisy measurements in wireless sensor networks. ISCIS Cesim Erten, Ömer Karatas
2009	—	`conf`	Biclustering Expression Data Based on Expanding Localized Substructures. BICoB Cesim Erten, Melih Sözdinler
2009	J	`jnl`	Crossing minimization in weighted bipartite graphs. J. Discrete Algorithms Olca A. Çakiroglu, Cesim Erten, Ömer Karatas, Melih Sözdinler
2009	—	`conf`	Fully Decentralized, Collaborative Multilateration Primitives for Uniquely Localizing WSNs. WASA Arda Cakiroglu, Cesim Erten
2008	A	`conf`	A Robust Biclustering Method Based on Crossing Minimization in Bipartite Graphs. GD Cesim Erten, Melih Sözdinler
2007	Misc	`conf`	Colored Simultaneous Geometric Embeddings. COCOON Ulrik Brandes, Cesim Erten, J. Joseph Fowler, Fabrizio Frati, Markus Geyer, Carsten Gutwenger, Seok-Hee Hong, Michael Kaufmann, Stephen G. Kobourov, Giuseppe Liotta, Petra Mutzel, Antonios Symvonis
2007	—	`conf`	Crossing Minimization in Weighted Bipartite Graphs. WEA Olca A. Çakiroglu, Cesim Erten, Ömer Karatas, Melih Sözdinler
2007	J	`jnl`	Fixed-Location Circular Arc Drawing of Planar Graphs. J. Graph Algorithms Appl. Alon Efrat, Cesim Erten, Stephen G. Kobourov
2007	J	`jnl`	On simultaneous planar graph embeddings. Comput. Geom. Peter Braß, Eowyn Cenek, Christian A. Duncan, Alon Efrat, Cesim Erten, Dan Ismailescu, Stephen G. Kobourov, Anna Lubiw, Joseph S. B. Mitchell
2006	A	`conf`	Force-Directed Approaches to Sensor Localization. ALENEX Alon Efrat, David Forrester, Anand Iyer, Stephen G. Kobourov, Cesim Erten
2006	A	`conf`	GSPIM: graphical visualization tool for MIPS assembly programming and simulation. SIGCSE Patrick Borunda, Chris Brewer, Cesim Erten
2005	J	`jnl`	Simultaneous Embedding of Planar Graphs with Few Bends. J. Graph Algorithms Appl. Cesim Erten, Stephen G. Kobourov
2005	J	`jnl`	Simultaneous Embedding of a Planar Graph and Its Dual on the Grid. Theory Comput. Syst. Cesim Erten, Stephen G. Kobourov
2005	J	`jnl`	Simultaneous Graph Drawing: Layout Algorithms and Visualization Schemes. J. Graph Algorithms Appl. Cesim Erten, Stephen G. Kobourov, Vu Le, Armand Navabi
2004	Misc	`conf`	Exploring the computing literature using temporal graph visualization. Visualization and Data Analysis Cesim Erten, Philip J. Harding, Stephen G. Kobourov, Kevin Wampler, Gary V. Yee
2004	—	`conf`	Morphing planar graphs. SCG Cesim Erten, Stephen G. Kobourov, Chandan Pitta
2004	A	`conf`	Simultaneous Embedding of Planar Graphs with Few Bends. GD Cesim Erten, Stephen G. Kobourov
2003	A	`conf`	Fixed-Location Circular-Arc Drawing of Planar Graphs. GD Alon Efrat, Cesim Erten, Stephen G. Kobourov
2003	A	`conf`	GraphAEL: Graph Animations with Evolving Layouts. GD Cesim Erten, Philip J. Harding, Stephen G. Kobourov, Kevin Wampler, Gary V. Yee
2003	A	`conf`	Intersection-Free Morphing of Planar Graphs. GD Cesim Erten, Stephen G. Kobourov, Chandan Pitta
2003	B	`conf`	On Simultaneous Planar Graph Embeddings. WADS Peter Braß, Eowyn Cenek, Christian A. Duncan, Alon Efrat, Cesim Erten, Dan Ismailescu, Stephen G. Kobourov, Anna Lubiw, Joseph S. B. Mitchell
2003	A	`conf`	Simultaneous Graph Drawing: Layout Algorithms and Visualization Schemes. GD Cesim Erten, Stephen G. Kobourov, Vu Le, Armand Navabi
2002	J	`jnl`	On Simultaneous Graph Embedding CoRR Christian A. Duncan, Alon Efrat, Cesim Erten, Stephen G. Kobourov, Joseph S. B. Mitchell
2002	J	`jnl`	Simultaneous Embedding of a Planar Graph and Its Dual on the Grid CoRR Cesim Erten, Stephen G. Kobourov
2002	B	`conf`	Simultaneous Embedding of a Planar Graph and Its Dual on the Grid. ISAAC Cesim Erten, Stephen G. Kobourov