Catarina Barata

79 papers B 8C 2Misc 7Journal 30Unranked 30
YearRankTypeTitle / Venue / Authors
2026 J jnl
Int. J. Comput. Assist. Radiol. Surg.
L. T. Castro, Catarina Barata, P. Martins, F. Afonso, M. Pascoal, Carlos Santiago, Laurent Mennillo, P. Mira, Danail Stoyanov, Manish Chand, Sophia Bano, Antonio S. Soares
2026 J jnl
CoRR
Alaa Yasser, Kittipat Phunjanna, Marcos Escudero-Viñolo, Catarina Barata, Jenny Benois-Pineau
2026 ed.
ISIC@MICCAI
M. Emre Celebi, Johanna Paula Müller, Catarina Barata, Allan Halpern, Philipp Tschandl, Marc Combalia, Yuan Liu, Kumar Abhishek, Joanna Jaworek-Korjakowska, Moi Hoon Yap, Katharina Breininger, Maximilian Lindholz, Jana Hutter, Richard Ruppel, Smiti Tripathy, Franziska Mathis-Ullrich, Stefanie Burghaus, Matthias May
2025 J jnl
CoRR
Rui Daniel, Maria Rita Verdelho, Catarina Barata, Carlos Santiago
2025 conf
IbPRIA (2)
Rui Daniel, Maria Rita Verdelho, Catarina Barata, Carlos Santiago
2025 conf
IbPRIA (2)
Maria Rita Verdelho, Alexandre Bernardino, Catarina Barata
2025 J jnl
CoRR
Maria Rita Verdelho, Alexandre Bernardino, Catarina Barata
2025 J jnl
CoRR
Alexandre Lopes, Catarina Barata, Plinio Moreno
2025 conf
IbPRIA (2)
Tiago Almeida, Plinio Moreno, Catarina Barata
2025 J jnl
CoRR
Tiago Almeida, Plinio Moreno, Catarina Barata
2025 J jnl
CoRR
Rita Pereira, Maria Rita Verdelho, Catarina Barata, Carlos Santiago
2024 J jnl
Pattern Recognit. Lett.
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2024 conf
BioRob
Laura Santos, Bernardo Carvalho, Catarina Barata, José Santos-Victor
2024 J jnl
CoRR
Laura Santos, Bernardo Carvalho, Catarina Barata, José Santos-Victor
2024 conf
CVPR Workshops
D. J. Araújo, Maria Rita Verdelho, Alceu Bissoto, Jacinto C. Nascimento, Carlos Santiago, Catarina Barata
2024 J jnl
CoRR
Diogo J. Araújo, Maria Rita Verdelho, Alceu Bissoto, Jacinto C. Nascimento, Carlos Santiago, Catarina Barata
2024 conf
CVPR Workshops
Tiago Mota, Maria Rita Verdelho, Diogo J. Araújo, Alceu Bissoto, Carlos Santiago, Catarina Barata
2024 J jnl
CoRR
Tiago Mota, Maria Rita Verdelho, Alceu Bissoto, Carlos Santiago, Catarina Barata
2024 J jnl
CoRR
Kirill Sirotkin, Marcos Escudero-Viñolo, Pablo Carballeira, Mayug Maniparambil, Catarina Barata, Noel E. O'Connor
2024 conf
EMBC
Filipe Ribeiro, Catarina Barata, João Ribeiro, João Sanches
2024 J jnl
CoRR
Miguel Correia, Alceu Bissoto, Carlos Santiago, Catarina Barata
2023 J jnl
Medical Image Anal.
Zahra Mirikharaji, Kumar Abhishek, Alceu Bissoto, Catarina Barata, Sandra Avila, Eduardo Valle, M. Emre Celebi, Ghassan Hamarneh
2023 J jnl
CoRR
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2023 conf
ISIC/Care-AI/MedAGI/DeCaF@MICCAI
Carlos Santiago, Miguel Correia, Maria Rita Verdelho, Alceu Bissoto, Catarina Barata
2023 J jnl
IEEE J. Biomed. Health Informatics
M. Emre Celebi, Catarina Barata, Allan Halpern, Philipp Tschandl, Marc Combalia, Yuan Liu
2023 conf
ISBI
António Mendes, Catarina Barata
2023 ed.
ISIC/Care-AI/MedAGI/DeCaF@MICCAI
M. Emre Celebi, Md Sirajus Salekin, Hyunwoo J. Kim, Shadi Albarqouni, Catarina Barata, Allan Halpern, Philipp Tschandl, Marc Combalia, Yuan Liu, Ghada Zamzmi, Joshua Levy, Huzefa Rangwala, Annika Reinke, Diya Wynn, Bennett A. Landman, Won-Ki Jeong, Yiqing Shen, Zhongying Deng, Spyridon Bakas, Xiaoxiao Li, Chen Qin, Nicola Rieke, Holger Roth, Daguang Xu
2023 conf
ISIC/Care-AI/MedAGI/DeCaF@MICCAI
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2023 J jnl
CoRR
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2022 J jnl
CoRR
Zahra Mirikharaji, Catarina Barata, Kumar Abhishek, Alceu Bissoto, Sandra Avila, Eduardo Valle, M. Emre Celebi, Ghassan Hamarneh
2022 conf
ICPR Workshops (2)
Lisa Kuhlmann, Milad Niknejad, Catarina Barata, Alexandre Bernardino, Gefei Zhang
2022 conf
ECCV Workshops (4)
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2022 J jnl
CoRR
Alceu Bissoto, Catarina Barata, Eduardo Valle, Sandra Avila
2022 Misc conf
IbPRIA
Beatriz Alves, Catarina Barata, Jorge S. Marques
2022 conf
ICPR Workshops (2)
Sara Fernandes, Milad Niknejad, Catarina Barata, Alexandre Bernardino
2022 J jnl
Medical Image Anal.
M. Emre Celebi, Catarina Barata, Allan Halpern, Philipp Tschandl, Marc Combalia, Yuan Liu
2022 conf
ISBI
Maria Rita Verdelho, Catarina Barata
2022 B conf
ICPR
Pedro Bilro, Catarina Barata, Jorge S. Marques
2022 conf
AIIIMA/MIABID@MICCAI
Maria Rita Verdelho, Simão Gonçalves, Luisa Gonçalves, Catarina Costa, José M. Lopes, Margarida M. V. Coelho, Alexandre João, Paula Soares, Helena Pópulo, Catarina Barata
2022 conf
ICORR
Laura Santos, Bárbara Silva, Filippo Maddaloni, Alice Geminiani, Arianna Caglio, Silvia Annunziata, Ivana Olivieri, Catarina Barata, José Santos-Victor, Alessandra Pedrocchi
2022 B conf
ICPR
Bernardo Amaral, Milad Niknejad, Catarina Barata, Alexandre Bernardino
2021 J jnl
Pattern Recognit.
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2021 conf
MICCAI (3)
Catarina Barata, Carlos Santiago
2021 J jnl
Pattern Recognit.
Carlos Santiago, Catarina Barata, Michele Sasdelli, Gustavo Carneiro, Jacinto C. Nascimento
2021 J jnl
Pattern Recognit.
Catarina Barata, Jacinto C. Nascimento, João Miranda Lemos, Jorge S. Marques
2020 conf
CVPR Workshops
Catarina Barata, Carlos Santiago
2019 J jnl
IEEE J. Biomed. Health Informatics
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2019 conf
CVPR Workshops
Catarina Barata, Jorge S. Marques, M. Emre Celebi
2019 conf
ISBI
Catarina Barata, Jorge S. Marques
2019 conf
IbPRIA (1)
Ana Portêlo, Andrea Cavallaro, Catarina Barata, Jorge S. Marques
2019 Misc conf
ICASSP
Catarina Barata, Jacinto C. Nascimento, Jorge S. Marques
2019 B conf
ICIP
Catarina Barata, Mário A. T. Figueiredo, Jorge S. Marques
2019 conf
IbPRIA (2)
Bárbara Ferreira, Catarina Barata, Jorge S. Marques
2018 B conf
ACIVS
Ana Portêlo, Jorge S. Marques, Catarina Barata, João Miranda Lemos
2018 B conf
ICIP
Catarina Barata, João Miranda Lemos, Jorge S. Marques
2018 B conf
ACIVS
Catarina Barata, Jacinto C. Nascimento, Jorge S. Marques
2017 B conf
ICIP
Catarina Barata, Jacinto C. Nascimento, Jorge S. Marques
2017 J jnl
Comput. methods Biomech. Biomed. Eng. Imaging Vis.
Margarida Ruela, Catarina Barata, Jorge S. Marques, Jorge Rozeira
2017 J jnl
Pattern Recognit.
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2017 Misc conf
IbPRIA
Catarina Barata, Mário A. T. Figueiredo, M. Emre Celebi, Jorge S. Marques
2016 J jnl
Comput. Vis. Image Underst.
Catarina Barata, M. Emre Celebi, Jorge S. Marques, Jorge Rozeira
2015 conf
EMBC
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2015 Misc conf
IbPRIA
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2015 J jnl
IEEE J. Biomed. Health Informatics
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2015 conf
EMBC
Catarina Barata, M. Emre Celebi, Jorge S. Marques
2014 Misc conf
ICASSP
Catarina Barata, Mário A. T. Figueiredo, M. Emre Celebi, Jorge S. Marques
2014 B conf
ICIP
Catarina Barata, Jorge S. Marques, M. Emre Celebi
2014 J jnl
IEEE Syst. J.
Catarina Barata, Margarida Ruela, Mariana Francisco, Teresa Mendonça, Jorge S. Marques
2013 conf
ICIAR
Catarina Barata, Jorge S. Marques, Teresa Mendonça
2013 conf
ISVC (1)
Catarina Barata, Jorge S. Marques, Jorge Rozeira
2013 C conf
ISPA
Margarida Ruela, Catarina Barata, Teresa Mendonça, Jorge S. Marques
2013 Misc conf
IbPRIA
Catarina Barata, Jorge S. Marques, Jorge Rozeira
2013 C conf
ISPA
Catarina Barata, Jorge S. Marques, M. Emre Celebi
2013 conf
ISVC (1)
Margarida Ruela, Catarina Barata, Jorge S. Marques
2013 Misc conf
IbPRIA
Margarida Ruela, Catarina Barata, Teresa Mendonça, Jorge S. Marques
2012 J jnl
IEEE Trans. Biomed. Eng.
Catarina Barata, Jorge S. Marques, Jorge Rozeira
2012 conf
ISBI
Catarina Barata, Jorge S. Marques, Jorge Rozeira
2012 conf
EMBC
Jorge S. Marques, Catarina Barata, Teresa Mendonça
2011 conf
EMBC
Catarina Barata, Jorge S. Marques, Jorge Rozeira
tests/unit/conftest.py
← Index tests/unit/conftest.py python
"""
Unit test configuration.

Replaces the redb.extractors package with a minimal stub so that
``from redb.extractors.database_exporters import ...`` works without
pulling in the heavy __init__.py import chain (pefile, elftools,
signify, magic, etc.).

Also stubs out redb.settings so that Elasticsearch / ClickHouse
clients are never actually created during unit tests.

Additionally installs binaryninja stubs for decompiler unit tests.

Stubs heavy third-party packages (pefile, magic, psutil, etc.) so that
redb.workers, redb.queries, redb.ingestor, and redb.s3_utils can all
be imported and patched in unit tests without requiring the real packages.
"""
import sys
import types
from pathlib import Path
from unittest.mock import MagicMock

# ---------------------------------------------------------------------------
# 0. Install binaryninja stubs FIRST — must happen before any decompiler
#    module is imported (triggered by __init__.py chain).
# ---------------------------------------------------------------------------
from tests.unit.conftest_binja_stubs import install_binja_stubs as _install_binja_stubs
_install_binja_stubs()

# ---------------------------------------------------------------------------
# 1. Stub external packages required by database_exporters.py itself,
#    the decompiler chain, and the workers/ingestor modules.
# ---------------------------------------------------------------------------
_heavy_deps = [
    # Database / networking
    "elasticsearch", "clickhouse_connect", "dotenv",
    # Binary analysis — top-level packages
    "pefile", "magic", "machofile",
    # Archive handling
    "py7zr", "pyzipper",
    # File type detection
    "magika",
    # System monitoring
    "psutil",
    # S3 / MinIO (submodule paths needed for `from minio.error import S3Error`)
    "minio", "minio.error",
    # YARA
    "yara_x",
    # Binary parsing — elftools tree
    "elftools", "elftools.elf", "elftools.elf.elffile",
    "elftools.common", "elftools.common.exceptions",
    # Code signing — signify tree
    "signify", "signify.fingerprinter", "signify.authenticode",
    # LIEF
    "lief",
    # Fuzzy hashing
    "ppdeep",
    # .NET analysis
    "dotnetfile",
    # Crypto / ASN.1
    "asn1crypto", "asn1crypto.cms", "asn1crypto.pem", "asn1crypto.x509", "asn1crypto.core",
    # Hashing
    "xxhash", "blake3", "mmh3", "numpy",
    # APK analysis
    "androguard", "androguard.core", "androguard.core.apk",
    "androguard.core.dex", "androguard.core.api_specific_resources",
    "androguard.misc",
    "permhash",
]
for _mod in _heavy_deps:
    if _mod not in sys.modules:
        try:
            __import__(_mod)
        except (ImportError, ModuleNotFoundError):
            sys.modules[_mod] = MagicMock()

# Stub urllib3 with a real Warning subclass (warnings.filterwarnings needs a class)
if "urllib3" not in sys.modules or isinstance(sys.modules.get("urllib3"), MagicMock):
    try:
        import urllib3  # noqa: F401
    except (ImportError, ModuleNotFoundError):
        _urllib3_mod = types.ModuleType("urllib3")
        _urllib3_exc = types.ModuleType("urllib3.exceptions")

        class _InsecureRequestWarning(UserWarning):
            pass

        _urllib3_exc.InsecureRequestWarning = _InsecureRequestWarning
        _urllib3_mod.exceptions = _urllib3_exc
        sys.modules["urllib3"] = _urllib3_mod
        sys.modules["urllib3.exceptions"] = _urllib3_exc

# Provide a functional ppdeep stub (tests call ppdeep.hash() and expect a string).
# Must overwrite the MagicMock that the loop above may have installed.
_ppdeep_existing = sys.modules.get("ppdeep")
if _ppdeep_existing is None or isinstance(_ppdeep_existing, MagicMock):
    _ppdeep_mod = types.ModuleType("ppdeep")
    _ppdeep_mod.__name__ = "ppdeep"

    def _ppdeep_hash(data):
        """Fake ssdeep hash — returns a deterministic placeholder."""
        if isinstance(data, str):
            data = data.encode("utf-8")
        if len(data) < 50:
            return None
        import hashlib
        h = hashlib.md5(data).hexdigest()
        return f"3:{h[:16]}:{h[16:]}"

    _ppdeep_mod.hash = _ppdeep_hash
    sys.modules["ppdeep"] = _ppdeep_mod

# Stub mmh3 if the C extension is not available
_mmh3_existing = sys.modules.get("mmh3")
if _mmh3_existing is None or isinstance(_mmh3_existing, MagicMock):
    _mmh3_mod = types.ModuleType("mmh3")
    _mmh3_mod.__name__ = "mmh3"

    def _mmh3_hash(data, seed=0):
        """Fake MurmurHash3 — deterministic hash using built-in hashlib."""
        import hashlib
        if isinstance(data, str):
            data = data.encode("utf-8")
        seed_bytes = (seed & 0xFFFFFFFF).to_bytes(8, "little")
        h = hashlib.md5(data + seed_bytes).digest()
        return int.from_bytes(h[:4], "little", signed=True)

    _mmh3_mod.hash = _mmh3_hash
    sys.modules["mmh3"] = _mmh3_mod

# Stub tlsh if the C extension is not available
if "tlsh" not in sys.modules:
    try:
        import tlsh as _real_tlsh  # noqa: F401
    except (ImportError, ModuleNotFoundError):
        _tlsh_mock = types.ModuleType("tlsh")
        _tlsh_mock.__name__ = "tlsh"

        def _tlsh_hash(data):
            """Fake TLSH hash — returns a deterministic placeholder.

            Returns empty string for data < 50 bytes or data with very
            low entropy (e.g. repeating patterns), mimicking the real
            TLSH library's "TNULL" behaviour.
            """
            if isinstance(data, str):
                data = data.encode("utf-8")
            if len(data) < 50:
                return ""
            # Real TLSH returns "" for low-entropy input
            if len(set(data)) < 8:
                return ""
            import hashlib
            return "T1" + hashlib.sha256(data).hexdigest()[:70].upper()

        _tlsh_mock.hash = _tlsh_hash
        sys.modules["tlsh"] = _tlsh_mock

# ---------------------------------------------------------------------------
# 2. Stub redb.settings (package) so module-level code never runs
# ---------------------------------------------------------------------------
_settings_mock = MagicMock()
_settings_mock.__name__ = "redb.settings"
sys.modules["redb.settings"] = _settings_mock
sys.modules["redb.settings.elasticsearch"] = MagicMock()
sys.modules["redb.settings.clickhouse"] = MagicMock()

# ---------------------------------------------------------------------------
# 3. Replace redb.extractors with a minimal package that does NOT eagerly
#    import every extractor (and their heavy deps).  Sub-module imports
#    like ``from redb.extractors.database_exporters import ...`` still work
#    because __path__ points to the real package directory.
# ---------------------------------------------------------------------------
_repo_root = Path(__file__).resolve().parents[2]
_extractors_pkg = types.ModuleType("redb.extractors")
_extractors_pkg.__path__ = [str(_repo_root / "redb" / "extractors")]
_extractors_pkg.__package__ = "redb.extractors"
sys.modules["redb.extractors"] = _extractors_pkg

# ---------------------------------------------------------------------------
# 4. Force-import redb submodules so that @patch('redb.workers.xxx'),
#    @patch('redb.queries.xxx'), etc. can resolve at decoration time.
#    This works because all heavy deps are already stubbed above.
# ---------------------------------------------------------------------------
import redb.logging_utils   # noqa: F401, E402
import redb.s3_utils         # noqa: F401, E402
import redb.queries          # noqa: F401, E402
import redb.workers          # noqa: F401, E402
import redb.ingestor         # noqa: F401, E402