Catalina O. Tudor

15 papers Journal 9Unranked 6
YearRankTypeTitle / Venue / Authors
2017 J jnl
WebGIVI: a web-based gene enrichment analysis and visualization tool.
BMC Bioinform.
Liang Sun, Yongnan Zhu, A. S. M. Ashique Mahmood, Catalina O. Tudor, Jia Ren, K. Vijay-Shanker, Jian Chen, Carl J. Schmidt
2016 J jnl
miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases.
J. Biomed. Semant.
Samir Gupta, Karen E. Ross, Catalina O. Tudor, Cathy H. Wu, Carl J. Schmidt, K. Vijay-Shanker
2015 J jnl
Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system.
Database J. Biol. Databases Curation
Catalina O. Tudor, Karen E. Ross, Gang Li, K. Vijay-Shanker, Cathy H. Wu, Cecilia N. Arighi
2014 — conf
Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis.
ICBO
Karen Ross, Catalina O. Tudor, Gang Li, Ruoyao Ding, Irem Çelen, Julie Cowart, Cecilia N. Arighi, Darren A. Natale, Cathy H. Wu
2014 J jnl
iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system.
Database J. Biol. Databases Curation
Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, K. Vijay-Shanker
2013 J jnl
A framework for biomedical figure segmentation towards image-based document retrieval.
BMC Syst. Biol.
Luis D. Lopez, Jingyi Yu, Cecilia N. Arighi, Catalina O. Tudor, Manabu Torii, Hongzhan Huang, K. Vijay-Shanker, Cathy H. Wu
2013 J jnl
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task.
Database J. Biol. Databases Curation
Cecilia N. Arighi, Ben Carterette, K. Bretonnel Cohen, Martin Krallinger, W. John Wilbur, Petra Fey, Robert J. Dodson, Laurel Cooper, Ceri E. Van Slyke, Wasila M. Dahdul, Paula M. Mabee, Donghui Li, Bethany R. Harris, Marc Gillespie, Silvia Jimenez, Phoebe M. Roberts, Lisa Matthews, Kevin G. Becker, Harold J. Drabkin, Susan M. Bello, Luana Licata, Andrew Chatr-aryamontri, Mary L. Schaeffer, Julie Park, Melissa A. Haendel, Kimberly Van Auken, Yuling Li, Juancarlos Chan, Hans-Michael Müller, Hong Cui, James P. Balhoff, Chi-Yang Wu, Zhiyong Lu, Chih-Hsuan Wei, Catalina O. Tudor, Kalpana Raja, Suresh Subramani, Jeyakumar Natarajan, Juan Miguel Cejuela, Pratibha Dubey, Cathy H. Wu
2012 J jnl
Developing a biocuration workflow for AgBase, a non-model organism database.
Database J. Biol. Databases Curation
Lakshmi R. Pillai, Philippe Chouvarine, Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker, Fiona M. McCarthy
2012 — conf
Pathway curation: Application of text-mining tools eGIFT and RLIMS-P.
BIBM Workshops
Carl J. Schmidt, Liang Sun, Cecilia N. Arighi, Keith Decker, K. Vijay-Shanker, Manabu Torii, Catalina O. Tudor, Cathy H. Wu, Peter D'Eustachio
2012 — conf
RankPref: Ranking Sentences Describing Relations between Biomedical Entities with an Application.
BioNLP@HLT-NAACL
Catalina O. Tudor, K. Vijay-Shanker
2012 — conf
Robust segmentation of biomedical figures for image-based document retrieval.
BIBM
Luis D. Lopez, Jingyi Yu, Catalina O. Tudor, Cecilia N. Arighi, Hongzhan Huang, K. Vijay-Shanker, Cathy H. Wu
2012 J jnl
The eFIP system for text mining of protein interaction networks of phosphorylated proteins.
Database J. Biol. Databases Curation
Catalina O. Tudor, Cecilia N. Arighi, Qinghua Wang, Cathy H. Wu, K. Vijay-Shanker
2012 — conf
iSimp: A sentence simplification system for biomedicail text.
BIBM
Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, K. Vijay-Shanker
2010 J jnl
eGIFT: Mining Gene Information from the Literature.
BMC Bioinform.
Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker
2008 — conf
Mining the Biomedical Literature for Genic Information.
BioNLP
Catalina O. Tudor, K. Vijay-Shanker, Carl J. Schmidt