Cassie S. Mitchell

23 papers A* 2A 1B 1Misc 1Journal 10Unranked 8
YearRankTypeTitle / Venue / Authors
2026 J jnl
Integrating curation into scientific publishing to train AI models.
Bioinform.
Jorge Abreu-Vicente, Hannah Sonntag, Thomas Eidens, Cassie S. Mitchell, Thomas Lemberger
2026 — conf
Where do LLMs currently stand on biomedical NER in both clean and noisy settings ?
EACL (Findings)
Christophe Ye, Cassie S. Mitchell
2025 — conf
BioEL: A Comprehensive Python Package for Biomedical Entity Linking.
NAACL (Findings)
Prasanth Bathala, Christophe Ye, Batuhan Nursal, Shubham Lohiya, David Kartchner, Cassie S. Mitchell
2025 — conf
LLM as Entity Disambiguator for Biomedical Entity-Linking.
ACL (2)
Christophe Ye, Cassie S. Mitchell
2025 J jnl
Source Robust Non-Parametric Reconstruction of Epidemic-like Event-Based Network Diffusion Processes Under Online Data.
Big Data Cogn. Comput.
Jiajia Xie, Chen Lin, Xinyu Guo, Cassie S. Mitchell
2024 J jnl
Data Augmentation with Cross-Modal Variational Autoencoders (DACMVA) for Cancer Survival Prediction.
Inf.
Sara Rajaram, Cassie S. Mitchell
2024 — conf
s-SuStaIn: Scaling subtype and stage inference via simultaneous clustering of subjects and biomarkers.
CHIL
Raghav Tandon, James J. Lah, Cassie S. Mitchell
2023 A* conf
A Comprehensive Evaluation of Biomedical Entity Linking Models.
EMNLP
David Kartchner, Jennifer Deng, Shubham Lohiya, Tejasri Kopparthi, Prasanth Bathala, Daniel Domingo-Fernández, Cassie S. Mitchell
2023 A* conf
BioSift: A Dataset for Filtering Biomedical Abstracts for Drug Repurposing and Clinical Meta-Analysis.
SIGIR
David Kartchner, Irfan Al-Hussaini, Haydn Turner, Jennifer Deng, Shubham Lohiya, Prasanth Bathala, Cassie S. Mitchell
2023 — conf
Pathology Dynamics at BioLaySumm: the trade-off between Readability, Relevance, and Factuality in Lay Summarization.
BioNLP@ACL
Irfan Al-Hussaini, Austin Wu, Cassie S. Mitchell
2023 Misc conf
Towards Interpretable Seizure Detection Using Wearables.
ICASSP
Irfan Al-Hussaini, Cassie S. Mitchell
2023 — conf
Zero-Shot Information Extraction for Clinical Meta-Analysis using Large Language Models.
BioNLP@ACL
David Kartchner, Selvi Ramalingam, Irfan Al-Hussaini, Olivia Kronick, Cassie S. Mitchell
2023 — conf
sEBM: Scaling Event Based Models to Predict Disease Progression via Implicit Biomarker Selection and Clustering.
IPMI
Raghav Tandon, Anna Kirkpatrick, Cassie S. Mitchell
2022 B conf
CCS Explorer: Relevance Prediction, Extractive Summarization, and Named Entity Recognition from Clinical Cohort Studies.
IEEE Big Data
Irfan Al-Hussaini, Davi Nakajima An, Albert J. Lee, Sarah Bi, Cassie S. Mitchell
2022 J jnl
CCS Explorer: Relevance Prediction, Extractive Summarization, and Named Entity Recognition from Clinical Cohort Studies.
CoRR
Irfan Al-Hussaini, Davi Nakajima An, Albert J. Lee, Sarah Bi, Cassie S. Mitchell
2022 J jnl
CompositeView: A Network-Based Visualization Tool.
Big Data Cogn. Comput.
Stephen Allegri, Kevin McCoy, Cassie S. Mitchell
2022 J jnl
Optimizations for Computing Relatedness in Biomedical Heterogeneous Information Networks: SemNet 2.0.
Big Data Cogn. Comput.
Anna Kirkpatrick, Chidozie Onyeze, David Kartchner, Stephen Allegri, Davi Nakajima An, Kevin McCoy, Evie Davalbhakta, Cassie S. Mitchell
2022 J jnl
Performance and utility trade-off in interpretable sleep staging.
CoRR
Irfan Al-Hussaini, Cassie S. Mitchell
2022 A conf
SERF: Interpretable Sleep Staging using Embeddings, Rules, and Features.
CIKM
Irfan Al-Hussaini, Cassie S. Mitchell
2022 J jnl
SERF: Interpretable Sleep Staging using Embeddings, Rules, and Features.
CoRR
Irfan Al-Hussaini, Cassie S. Mitchell
2020 — conf
Denoising Multi-Source Weak Supervision for Neural Text Classification.
EMNLP (Findings)
Wendi Ren, Yinghao Li, Hanting Su, David Kartchner, Cassie S. Mitchell, Chao Zhang
2020 J jnl
Denoising Multi-Source Weak Supervision for Neural Text Classification.
CoRR
Wendi Ren, Yinghao Li, Hanting Su, David Kartchner, Cassie S. Mitchell, Chao Zhang
2018 J jnl
Unraveling the Complexity of Amyotrophic Lateral Sclerosis Survival Prediction.
Frontiers Neuroinformatics
Stephen R. Pfohl, Renaid B. Kim, Grant S. Coan, Cassie S. Mitchell