Carlos S. Mendoza

16 papers B 4Journal 7Unranked 5
YearRankTypeTitle / Venue / Authors
2017 J jnl
IEEE Trans. Biomed. Eng.
Teresa Arroyo-Gallego, María-Jesus Ledesma-Carbayo, Álvaro Sánchez-Ferro, Ian Butterworth, Carlos S. Mendoza, Michele Matarazzo, Paloma Montero, Roberto Lopez-Blanco, Verónica P. Casaliglla, Rocio Trincado, Luca Giancardo
2016 J jnl
CoRR
Luca Giancardo, Álvaro Sánchez-Ferro, Teresa Arroyo-Gallego, Ian Butterworth, Carlos S. Mendoza, Paloma Montero, Michele Matarazzo, José A. Obeso, Martha L. Gray, Raúl San José Estépar
2014 J jnl
Medical Image Anal.
Carlos S. Mendoza, Nabile M. Safdar, Kazunori Okada, Emmarie Myers, Gary F. Rogers, Marius George Linguraru
2013 conf
Computer-Aided Diagnosis
Carlos S. Mendoza, Nabile M. Safdar, Emmarie Myers, Tanakorn Kittisarapong, Gary F. Rogers, Marius George Linguraru
2013 conf
MICCAI (3)
Carlos S. Mendoza, Xin Kang, Nabile M. Safdar, Emmarie Myers, Aaron D. Martin, Enrico Grisan, Craig A. Peters, Marius George Linguraru
2013 J jnl
IET Image Process.
Aurora Sáez, Carlos S. Mendoza, Begoña Acha, Carmen Serrano
2013 conf
ISBI
Carlos S. Mendoza, Xin Kang, Nabile M. Safdar, Emmarie Myers, Craig A. Peters, Marius George Linguraru
2013 J jnl
IEEE Trans. Image Process.
Carlos S. Mendoza, José Antonio Pérez-Carrasco, Aurora Sáez, Begoña Acha, Carmen Serrano
2012 conf
CLIP
Carlos S. Mendoza, Nabile M. Safdar, Emmarie Myers, Tanakorn Kittisarapong, Gary F. Rogers, Marius George Linguraru
2012 conf
ISBI
Carlos S. Mendoza, George R. Washko, James C. Ross, Alejandro A. Díaz, David A. Lynch, James D. Crapo, Edward K. Silverman, Begoña Acha, Carmen Serrano, Raúl San José Estépar
2012 J jnl
IEEE Trans. Medical Imaging
Pechin Lo, Bram van Ginneken, Joseph M. Reinhardt, Tarunashree Yavarna, Pim A. de Jong, Benjamin Irving, Catalin I. Fetita, Margarete Ortner, Romulo Pinho, Jan Sijbers, Marco Feuerstein, Anna Fabijanska, Christian Bauer, Reinhard Beichel, Carlos S. Mendoza, Rafael Wiemker, Jaesung Lee, Anthony P. Reeves, Silvia Born, Oliver Weinheimer, Eva M. van Rikxoort, Juerg Tschirren, Kensaku Mori, Benjamin Odry, David P. Naidich, Ieneke Hartmann, Eric A. Hoffman, Mathias Prokop, Jesper Johannes Holst Pedersen, Marleen de Bruijne
2012 J jnl
Mach. Vis. Appl.
Carlos S. Mendoza, Begoña Acha, Carmen Serrano, Tomás Gómez-Cía
2011 B conf
ICIP
Carlos S. Mendoza, Germán Bohórquez-Ruiz, Begoña Acha, Carmen Serrano
2009 B conf
ACIVS
Carlos S. Mendoza, Carmen Serrano, Begoña Acha
2009 B conf
ICIP
Carlos S. Mendoza, Carmen Serrano, Begoña Acha
2009 B conf
ACIVS
Carlos S. Mendoza, Begoña Acha, Carmen Serrano, Tomás Gómez-Cía
tests/unit/test_apk_decompile_extractor.py
← Index tests/unit/test_apk_decompile_extractor.py python
"""
Unit tests for DecompileAPK extractor, export data, and ClickHouse schemas.

Tests the main DecompileAPK extractor class following the DecompileBinja test pattern.
All analysis is mocked — no JADX/apktool/Java installation required.
"""
import hashlib
import os
import tempfile
import zipfile

import pytest
from unittest.mock import MagicMock, patch, PropertyMock
from dataclasses import asdict

pytestmark = [pytest.mark.unit, pytest.mark.apk, pytest.mark.decompile]


def _create_fake_apk_file():
    """Create a minimal APK file for testing and return its path."""
    tmpdir = tempfile.mkdtemp()
    apk_path = os.path.join(tmpdir, "test.apk")
    with zipfile.ZipFile(apk_path, "w") as zf:
        zf.writestr("AndroidManifest.xml", b"<manifest/>")
        zf.writestr("classes.dex", b"dex\n035\x00" + b"\x00" * 100)
    return apk_path


# ============================================================================
# DecompileAPK Extractor Tests
# ============================================================================

class TestDecompileAPK:
    """Tests for the DecompileAPK extractor class."""

    def test_tag(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            assert ext.tag() == "apk_decompiled"
        finally:
            os.unlink(apk_path)

    def test_get_clickhouse_table(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            assert ext.get_clickhouse_table() is None
        finally:
            os.unlink(apk_path)

    def test_timeout_default(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            assert ext.APK_DECOMPILE_TIMEOUT == 600
        finally:
            os.unlink(apk_path)

    def test_timeout_from_env(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            with patch.dict(os.environ, {"APK_DECOMPILE_TIMEOUT": "900"}):
                ext = DecompileAPK(apk_path, MagicMock())
                assert ext.APK_DECOMPILE_TIMEOUT == 900
        finally:
            os.unlink(apk_path)

    def test_timeout_invalid_env(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            with patch.dict(os.environ, {"APK_DECOMPILE_TIMEOUT": "not_a_number"}):
                ext = DecompileAPK(apk_path, MagicMock())
                assert ext.APK_DECOMPILE_TIMEOUT == 600
        finally:
            os.unlink(apk_path)

    def test_calculate_md5(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            result = ext.calculate_md5("test_string")
            assert len(result) == 32
            assert result == hashlib.md5(b"test_string").hexdigest()
        finally:
            os.unlink(apk_path)

    def test_context_manager(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            with DecompileAPK(apk_path, MagicMock()) as ext:
                assert ext is not None
        finally:
            os.unlink(apk_path)

    def test_cleanup_run(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            ext.analyzer = MagicMock()
            ext.cleanup_run()
            assert ext.analyzer is None
        finally:
            os.unlink(apk_path)


# ============================================================================
# Export Data Tests
# ============================================================================

class TestPrepareExportData:
    """Tests for DecompileAPK.prepare_export_data() ClickHouse schemas."""

    def _make_extractor_with_results(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        ext = DecompileAPK(apk_path, MagicMock())
        ext.analysis_results = {
            "sha256": "a" * 64,
            "sha1": "b" * 40,
            "md5": "c" * 32,
            "decompiled_content": [
                {
                    "decompiled_method_hash": "d" * 64,
                    "decompiled_method": "public void foo() {}",
                    "decompiled_method_type": "USER",
                    "decompiled_has_string_encryption": False,
                    "decompiled_has_reflection_calls": False,
                    "decompiled_excessive_goto_count": False,
                }
            ],
            "decompiled_refs": [
                {
                    "decompiled_method_hash": "d" * 64,
                    "smali_method_hash": "e" * 64,
                    "decompiled_class_name": "com.example.Foo",
                    "decompiled_method_name": "foo",
                    "decompiled_method_signature": "()V",
                    "decompiled_method_prototype": "void foo()",
                    "functions_caller": ["bar"],
                    "functions_call": ["baz"],
                }
            ],
            "smali_content": [
                {
                    "smali_method_hash": "e" * 64,
                    "smali_method": "invoke-virtual {p0}, Lfoo;->bar()V\nreturn-void",
                    "smali_method_type": "USER",
                    "smali_instructions_count": 10,
                    "smali_register_count": 3,
                    "smali_has_string_encryption": False,
                    "smali_has_reflection_calls": False,
                    "smali_excessive_goto_count": False,
                    "smali_flattened_score": 0.0,
                    "smali_mba_score": 0.0,
                }
            ],
            "smali_refs": [
                {
                    "smali_method_hash": "e" * 64,
                    "decompiled_method_hash": "d" * 64,
                    "smali_class_name": "com.example.Foo",
                    "smali_method_name": "foo",
                    "smali_method_signature": "()V",
                    "ssdeep_smali": None,
                    "tlsh_smali": None,
                }
            ],
            "similarity_metrics": [
                {
                    "smali_method_hash": "e" * 64,
                    "cyclomatic_complexity": 2,
                    "ssdeep_smali": None,
                    "tlsh_smali": None,
                    "ssdeep_smali_normalized": None,
                    "tlsh_smali_normalized": None,
                    "minhash": [],
                }
            ],
            "cfg": [
                {
                    "smali_method_hash": "e" * 64,
                    "cfg_topology_hash": b'\x01' * 16,
                    "block_count": 3,
                    "edge_count": 3,
                    "cfg_instructions_count": 10,
                    "call_count": 1,
                    "cyclomatic_complexity": 2,
                    "loop_count": 0,
                    "max_depth": 2,
                    "max_fan_out": 2,
                    "md_index_topdown": 12345,
                    "md_index_bottomup": 67890,
                    "prime_product_smali": 999,
                    "cfg_feature_tlsh": None,
                    "wl_minhash": [0] * 128,
                    "bb_features": [[5, 1, 0, 1, 1, 0, 0, 2]] * 3,
                    "cfg_adjacency": [0x00000001, 0x00000002],
                }
            ],
            "strings": [
                {
                    "string": "https://evil.example.com/payload",
                    "string_encoding": "UTF8",
                    "string_offset": 0,
                    "string_length": 31,
                    "string_entropy": 3.95,
                }
            ],
            "analysis_errors": [
                {
                    "class_name": "com.example.Foo",
                    "method_name": "bar",
                    "error_location": "jadx",
                    "error_message": "timeout",
                    "error_type": "TimeoutError",
                }
            ],
        }
        return ext, apk_path

    def test_returns_none_when_no_results(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            assert ext.prepare_export_data("ClickHouseExporter") is None
        finally:
            os.unlink(apk_path)

    def test_multi_table_flag(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            assert export["multi_table"] is True
        finally:
            os.unlink(apk_path)

    def test_all_table_keys_present(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            assert "decompiled_content" in export
            assert "decompiled_refs" in export
            assert "smali_content" in export
            assert "smali_refs" in export
            assert "method_similarity_metrics" in export
            assert "strings_raw" in export
            assert "analysis_errors" in export
        finally:
            os.unlink(apk_path)

    def test_decompiled_content_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            dc = export["decompiled_content"]
            assert dc["table"] == "code_apk_decompiled_methods_content"
            assert len(dc["column_names"]) == 7
            assert len(dc["column_type_names"]) == 7
            assert "decompiled_method_hash" in dc["column_names"]
            assert "decompiled_method" in dc["column_names"]
            assert "analysis_date" in dc["column_names"]
            assert len(dc["data"]) == 1
            assert len(dc["data"][0]) == 7
        finally:
            os.unlink(apk_path)

    def test_decompiled_refs_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            dr = export["decompiled_refs"]
            assert dr["table"] == "code_apk_decompiled_methods_references"
            assert len(dr["column_names"]) == 10
            assert len(dr["column_type_names"]) == 10
            assert "sha256" in dr["column_names"]
            assert "sha1" not in dr["column_names"]
            assert "md5" not in dr["column_names"]
            assert "functions_caller" in dr["column_names"]
            assert "functions_call" in dr["column_names"]
        finally:
            os.unlink(apk_path)

    def test_smali_content_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            sc = export["smali_content"]
            assert sc["table"] == "code_apk_smali_methods_content"
            assert len(sc["column_names"]) == 11
            assert len(sc["column_type_names"]) == 11
            assert "smali_instructions_count" in sc["column_names"]
            assert "smali_register_count" in sc["column_names"]
            assert "smali_flattened_score" in sc["column_names"]
            assert "smali_mba_score" in sc["column_names"]
        finally:
            os.unlink(apk_path)

    def test_smali_refs_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            sr = export["smali_refs"]
            assert sr["table"] == "code_apk_smali_methods_references"
            assert len(sr["column_names"]) == 7
            assert len(sr["column_type_names"]) == 7
            assert "sha1" not in sr["column_names"]
            assert "md5" not in sr["column_names"]
            assert "ssdeep_smali" not in sr["column_names"]
            assert "tlsh_smali" not in sr["column_names"]
        finally:
            os.unlink(apk_path)

    def test_similarity_metrics_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            sm = export["method_similarity_metrics"]
            assert sm["table"] == "code_apk_method_similarity_metrics"
            assert len(sm["column_names"]) == 7
            assert "minhash" in sm["column_names"]
            assert "ssdeep_smali_normalized" in sm["column_names"]
            assert "tlsh_smali_normalized" in sm["column_names"]
            # cyclomatic_complexity moved to cfg table
            assert "cyclomatic_complexity" not in sm["column_names"]
            assert "block_count" not in sm["column_names"]
            assert "loop_count" not in sm["column_names"]
        finally:
            os.unlink(apk_path)

    def test_analysis_errors_schema(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            ae = export["analysis_errors"]
            assert ae["table"] == "code_apk_analysis_errors"
            assert len(ae["column_names"]) == 9
            assert "error_hash" in ae["column_names"]
            assert "status" in ae["column_names"]
        finally:
            os.unlink(apk_path)

    def test_sha256_propagated_to_refs(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            export = ext.prepare_export_data("ClickHouseExporter")
            # Check that sha256 from analysis_results appears in ref rows
            dr_row = export["decompiled_refs"]["data"][0]
            assert dr_row[0] == "a" * 64  # sha256
            # sha1 and md5 no longer included in refs
            assert "sha1" not in export["decompiled_refs"]["column_names"]
            assert "md5" not in export["decompiled_refs"]["column_names"]
        finally:
            os.unlink(apk_path)

    def test_empty_tables_not_included(self):
        from redb.extractors.decompiler.DecompileAPK import DecompileAPK
        apk_path = _create_fake_apk_file()
        try:
            ext = DecompileAPK(apk_path, MagicMock())
            ext.analysis_results = {
                "sha256": "a" * 64,
                "sha1": "b" * 40,
                "md5": "c" * 32,
                "decompiled_content": [],
                "decompiled_refs": [],
                "smali_content": [],
                "smali_refs": [],
                "similarity_metrics": [],
                "cfg": [],
                "strings": [],
                "analysis_errors": [],
            }
            export = ext.prepare_export_data("ClickHouseExporter")
            assert export == {"multi_table": True}
        finally:
            os.unlink(apk_path)

    def test_non_clickhouse_exporter_returns_none(self):
        ext, apk_path = self._make_extractor_with_results()
        try:
            result = ext.prepare_export_data("ElasticsearchExporter")
            assert result is None
        finally:
            os.unlink(apk_path)


# ============================================================================
# Dataclass Tests
# ============================================================================

class TestAPKCodeAnalysisDataclasses:
    """Tests for the new APK code analysis dataclasses."""

    def test_decompiled_method_content(self):
        from redb.models.dataclasses import APKDecompiledMethodContent
        dc = APKDecompiledMethodContent(
            decompiled_method_hash="a" * 64,
            decompiled_method="public void foo() {}",
            decompiled_method_type="USER",
        )
        assert dc.decompiled_has_string_encryption is False
        assert dc.decompiled_has_reflection_calls is False
        assert dc.decompiled_excessive_goto_count is False

    def test_decompiled_method_content_populated(self):
        from redb.models.dataclasses import APKDecompiledMethodContent
        dc = APKDecompiledMethodContent(
            decompiled_method_hash="a" * 64,
            decompiled_method="public void foo() {}",
            decompiled_method_type="USER",
            decompiled_has_string_encryption=True,
            decompiled_has_reflection_calls=True,
            decompiled_excessive_goto_count=True,
        )
        assert dc.decompiled_has_string_encryption is True
        d = asdict(dc)
        assert d["decompiled_method_hash"] == "a" * 64

    def test_decompiled_method_reference(self):
        from redb.models.dataclasses import APKDecompiledMethodReference
        dr = APKDecompiledMethodReference(
            sha256="a" * 64,
            sha1="b" * 40,
            md5="c" * 32,
            decompiled_method_hash="d" * 64,
        )
        assert dr.functions_caller == []
        assert dr.functions_call == []
        assert dr.smali_method_hash is None

    def test_smali_method_content(self):
        from redb.models.dataclasses import APKSmaliMethodContent
        sc = APKSmaliMethodContent(
            smali_method_hash="e" * 64,
            smali_method="invoke-virtual {p0}, Lfoo;->bar()V",
            smali_method_type="USER",
            smali_instructions_count=5,
            smali_register_count=3,
        )
        assert sc.smali_instructions_count == 5
        assert sc.smali_register_count == 3

    def test_smali_method_reference(self):
        from redb.models.dataclasses import APKSmaliMethodReference
        sr = APKSmaliMethodReference(
            sha256="a" * 64,
            sha1="b" * 40,
            md5="c" * 32,
            smali_method_hash="e" * 64,
        )
        assert sr.decompiled_method_hash is None
        assert sr.ssdeep_smali is None
        assert sr.tlsh_smali is None

    def test_method_similarity_metrics(self):
        from redb.models.dataclasses import APKMethodSimilarityMetrics
        ms = APKMethodSimilarityMetrics(smali_method_hash="e" * 64)
        assert ms.cyclomatic_complexity is None
        assert ms.ssdeep_smali_normalized is None
        assert ms.tlsh_smali_normalized is None
        assert ms.minhash == []

    def test_code_analysis_error(self):
        from redb.models.dataclasses import APKCodeAnalysisError
        err = APKCodeAnalysisError(
            sha256="a" * 64,
            error_location="jadx",
            error_message="timeout",
        )
        assert err.class_name is None
        assert err.method_name is None
        assert err.error_type is None


# ============================================================================
# Tag Enum Tests
# ============================================================================

class TestAPKDecompiledTag:
    """Tests for the APK_DECOMPILED tag enum."""

    def test_tag_exists(self):
        from redb.extractors.enum import Tag
        assert hasattr(Tag, "APK_DECOMPILED")

    def test_tag_value(self):
        from redb.extractors.enum import Tag
        assert Tag.APK_DECOMPILED.value == "apk_decompiled"


# ============================================================================
# Worker Integration Tests
# ============================================================================

class TestAPKWorkerDecompileIntegration:
    """Tests that DecompileAPK is registered in workers.py."""

    def test_module_registered(self):
        """Verify DecompileAPK is discoverable via the extractor registry."""
        from redb.extractor_registry import get_extractor_class
        cls = get_extractor_class("DecompileAPK")
        assert cls is not None, "DecompileAPK not found in extractor registry"
        assert cls.__name__ == "DecompileAPK"

    def test_worker_apk_dispatch_includes_decompile(self):
        import inspect
        import redb.workers as workers
        source = inspect.getsource(workers.process_binary_file)
        assert "DecompileAPK" in source