Carlos H. M. Rodrigues

16 papers Journal 15
YearRankTypeTitle / Venue / Authors
2024 J jnl
piscesCSM: prediction of anticancer synergistic drug combinations.
J. Cheminformatics
Raghad Al-Jarf, Carlos H. M. Rodrigues, Yoochan Myung, Douglas E. V. Pires, David B. Ascher
2023 J jnl
DDMut: predicting effects of mutations on protein stability using deep learning.
Nucleic Acids Res.
Yunzhuo Zhou, Qisheng Pan, Douglas E. V. Pires, Carlos H. M. Rodrigues, David B. Ascher
2023 J jnl
DockNet: high-throughput protein-protein interface contact prediction.
Bioinform.
Nathan P. Williams, Carlos H. M. Rodrigues, Jia Truong, David B. Ascher, Jessica K. Holien
2023 J jnl
LEGO-CSM: a tool for functional characterization of proteins.
Bioinform.
Thanh Binh Nguyen, Alex G. C. de Sá, Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher
2022 J jnl
CSM-Potential: mapping protein interactions and biological ligands in 3D space using geometric deep learning.
Nucleic Acids Res.
Carlos H. M. Rodrigues, David B. Ascher
2022 J jnl
Structural landscapes of PPI interfaces.
Briefings Bioinform.
Carlos H. M. Rodrigues, Douglas E. V. Pires, Tom L. Blundell, David B. Ascher
2021 — ch.
Identifying Genotype-Phenotype Correlations via Integrative Mutation Analysis.
Artificial Neural Networks, 3rd Edition
Edward Airey, Stephanie Portelli, Joicymara S. Xavier, Yoochan Myung, Michael Silk, Malancha Karmakar, João P. L. Velloso, Carlos H. M. Rodrigues, Hardik H. Parate, Anjali Garg, Raghad Al-Jarf, Lucy Barr, Juliana A. Geraldo, Pâmela M. Rezende, Douglas E. V. Pires, David B. Ascher
2021 J jnl
MTR3D: identifying regions within protein tertiary structures under purifying selection.
Nucleic Acids Res.
Michael Silk, Douglas E. V. Pires, Carlos H. M. Rodrigues, Elston N. D'souza, Moshe Olshansky, Natalie Thorne, David B. Ascher
2021 J jnl
mmCSM-PPI: predicting the effects of multiple point mutations on protein-protein interactions.
Nucleic Acids Res.
Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher
2021 J jnl
pdCSM-PPI: Using Graph-Based Signatures to Identify Protein-Protein Interaction Inhibitors.
J. Chem. Inf. Model.
Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher
2020 J jnl
EasyVS: a user-friendly web-based tool for molecule library selection and structure-based virtual screening.
Bioinform.
Douglas E. V. Pires, Wandré N. P. Veloso, Yoochan Myung, Carlos H. M. Rodrigues, Michael Silk, Pâmela M. Rezende, Francislon Silva, Joicymara S. Xavier, João P. L. Velloso, Carlos Henrique da Silveira, David B. Ascher
2020 J jnl
mCSM-AB2: guiding rational antibody design using graph-based signatures.
Bioinform.
Yoochan Myung, Carlos H. M. Rodrigues, David B. Ascher, Douglas E. V. Pires
2020 J jnl
mCSM-membrane: predicting the effects of mutations on transmembrane proteins.
Nucleic Acids Res.
Douglas E. V. Pires, Carlos H. M. Rodrigues, David B. Ascher
2019 J jnl
mCSM-PPI2: predicting the effects of mutations on protein-protein interactions.
Nucleic Acids Res.
Carlos H. M. Rodrigues, Yoochan Myung, Douglas E. V. Pires, David B. Ascher
2018 J jnl
DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability.
Nucleic Acids Res.
Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher
2018 J jnl
Kinact: a computational approach for predicting activating missense mutations in protein kinases.
Nucleic Acids Res.
Carlos H. M. Rodrigues, David B. Ascher, Douglas E. V. Pires