C. Victor Jongeneel

18 papers A 1C 1Journal 15Unranked 1
YearRankTypeTitle / Venue / Authors
2021 J jnl
Ten simple rules for developing bioinformatics capacity at an academic institution.
PLoS Comput. Biol.
Shaun Aron, C. Victor Jongeneel, Paballo Abel Chauke, Melek Chaouch, Judit Kumuthini, Lyndon Zass, Fouzia Radouani, Samar Kamal Kassim, Faisal M. Fadlelmola, Nicola J. Mulder
2018 J jnl
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics.
BMC Bioinform.
Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O'Connor, Michael R. Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila S. Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola J. Mulder
2017 J jnl
Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.
PLoS Comput. Biol.
C. Victor Jongeneel, Ovokeraye Achinike-Oduaran, Ezekiel F. Adebiyi, Marion O. Adebiyi, Seun Adeyemi, Bola Akanle, Shaun Aron, Efejiro Ashano, Hocine Bendou, Gerrit Botha, Emile R. Chimusa, Ananyo Choudhury, Ravikiran Donthu, Jenny Drnevich, Oluwadamilare Falola, Christopher J. Fields, Scott Hazelhurst, Liesl Hendry, Itunuoluwa Isewon, Radhika S. Khetani, Judit Kumuthini, Magambo Phillip Kimuda, Lerato E. Magosi, Liudmila S. Mainzer, Suresh Maslamoney, Mamana Mbiyavanga, Ayton Meintjes, Danny Mugutso, Phelelani T. Mpangase, Richard Munthali, Victoria Nembaware, Andrew Ndhlovu, Trust Odia, Adaobi Okafor, Olaleye Oladipo, Sumir Panji, Venesa Pillay, Gloria Rendon, Dhriti Sengupta, Nicola J. Mulder
2016 — conf
Efficient and Scalable Workflows for Genomic Analyses.
DIDC@HPDC
Subho S. Banerjee, Arjun P. Athreya, Liudmila S. Mainzer, C. Victor Jongeneel, Wen-mei W. Hwu, Zbigniew T. Kalbarczyk, Ravishankar K. Iyer
2015 J jnl
KnowEnG: a knowledge engine for genomics.
J. Am. Medical Informatics Assoc.
Saurabh Sinha, Jun Song, Richard M. Weinshilboum, C. Victor Jongeneel, Jiawei Han
2010 J jnl
EuroDia: a beta-cell gene expression resource.
Database J. Biol. Databases Curation
Robin Liechti, Gábor Csárdi, Sven Bergmann, Frédéric Schütz, Thierry Sengstag, Sylvia F. Boj, Joan-Marc Servitja, Jorge Ferrer, Leentje Van Lommel, Frans Schuit, Sonia Klinger, Bernard Thorens, Najib Naamane, Decio L. Eizirik, Lorella Marselli, Marco Bugliani, Piero Marchetti, Stephanie Lucas, Cecilia Holm, C. Victor Jongeneel, Ioannis Xenarios
2007 J jnl
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res.
Marco Pagni, Vassilios Ioannidis, Lorenzo Cerutti, Monique Zahn-Zabal, C. Victor Jongeneel, Jörg Hau, Olivier Martin, Dmitri Kuznetsov, Laurent Falquet
2007 J jnl
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
Nucleic Acids Res.
Sébastien Moretti, Fabrice Armougom, Iain M. Wallace, Desmond G. Higgins, C. Victor Jongeneel, Cédric Notredame
2005 J jnl
Rapid and selective surveillance of Arabidopsis thaliana genome annotations with Centrifuge.
Bioinform.
Florence Armand, Philipp Bucher, C. Victor Jongeneel, Edward E. Farmer
2004 J jnl
MyHits: a new interactive resource for protein annotation and domain identification.
Nucleic Acids Res.
Marco Pagni, Vassilios Ioannidis, Lorenzo Cerutti, Monique Zahn-Zabal, C. Victor Jongeneel, Laurent Falquet
2004 J jnl
trome, trEST and trGEN: databases of predicted protein sequences.
Nucleic Acids Res.
Peter Sperisen, Christian Iseli, Marco Pagni, Brian J. Stevenson, Philipp Bucher, C. Victor Jongeneel
2003 C conf
Modeling sequencing errors by combining Hidden Markov models.
ECCB
Claudio Lottaz, Christian Iseli, C. Victor Jongeneel, Philipp Bucher
2003 J jnl
Swiss EMBnet node web server.
Nucleic Acids Res.
Laurent Falquet, Lorenza Bordoli, Vassilios Ioannidis, Marco Pagni, C. Victor Jongeneel
2001 J jnl
Making Sense of Score Statistics for Sequence Alignments.
Briefings Bioinform.
Marco Pagni, C. Victor Jongeneel
2001 J jnl
trEST, trGEN and Hits: access to databases of predicted protein sequences.
Nucleic Acids Res.
Marco Pagni, Christian Iseli, Thomas Junier, Laurent Falquet, C. Victor Jongeneel, Philipp Bucher
2000 J jnl
Searching the Expressed Sequence Tag (EST) Databases: Panning for Genes.
Briefings Bioinform.
C. Victor Jongeneel
2000 J jnl
The need for a human gene index.
Bioinform.
C. Victor Jongeneel
1999 A conf
ESTScan: A Program for Detecting, Evaluating, and Reconstructing Potential Coding Regions in EST Sequences.
ISMB
Christian Iseli, C. Victor Jongeneel, Philipp Bucher