Burcu Bakir-Gungor

39 papers Journal 19Unranked 19
YearRankTypeTitle / Venue / Authors
2026 — conf
AMP-zGSM: A z-Scoring Enhanced Grouping-Scoring-Modeling Framework for Antimicrobial Peptide Prediction.
BIOSTEC (2)
Demet Parlak Sönmez, Burcu Bakir-Gungor, Malik Yousef
2026 J jnl
GenShare: A Blockchain-Based Genomic Data Sharing Platform.
Distributed Ledger Technol. Res. Pract.
Beyhan Adanur Dedeturk, Ahmet Soran, Burcu Bakir-Gungor
2025 J jnl
Breast Cancer Detection Using a New Parallel Hybrid Logistic Regression Model Trained by Particle Swarm Optimization and Clonal Selection Algorithms.
Concurr. Comput. Pract. Exp.
Mustafa Etcil, Bilge Kagan Dedeturk, Burak Kolukisa, Burcu Bakir-Gungor, Vehbi Cagri Gungor
2025 — conf
Enhancing the Efficiency of the Grouping-Scoring-Modeling Framework with Statistical Pre-Scoring Component for Transcriptomic Data Analysis.
BIOSTEC (1)
Maham Khokhar, Burcu Bakir-Gungor, Malik Yousef
2025 — conf
Identifying Inflammatory Bowel Disease-Associated Gene Ontology Groups Using Biological Knowledge-Based Machine Learning.
BIOSTEC (1)
Nur Sebnem Ersoz, Burcu Bakir-Gungor, Malik Yousef
2025 — conf
PathDisGene: Discovering Informative Gene Groups for Disease Diagnosis Using Pathway-Disease Associations and a Grouping, Scoring, Modeling-Based Machine Learning Approach.
BIOSTEC (1)
Emma Qumsiyeh, Burcu Bakir-Gungor, Malik Yousef
2025 J jnl
Prediction of colorectal cancer based on taxonomic levels of microorganisms and discovery of taxonomic biomarkers using the Grouping-Scoring-Modeling (G-S-M) approach.
Comput. Biol. Medicine
Burcu Bakir-Gungor, Mustafa Temiz, Beyza Canakcimaksutoglu, Malik Yousef
2025 J jnl
RCE-IFE: recursive cluster elimination with intra-cluster feature elimination.
PeerJ Comput. Sci.
Cihan Kuzudisli, Burcu Bakir-Gungor, Bahjat Qaqish, Malik Yousef
2024 J jnl
Aguhyper: a hyperledger-based electronic health record management framework.
PeerJ Comput. Sci.
Beyhan Adanur Dedeturk, Burcu Bakir-Gungor
2024 J jnl
CCPred: Global and population-specific colorectal cancer prediction and metagenomic biomarker identification at different molecular levels using machine learning techniques.
Comput. Biol. Medicine
Burcu Bakir-Gungor, Mustafa Temiz, Yasin Inal, Emre Cicekyurt, Malik Yousef
2024 J jnl
CSA-DE-LR: enhancing cardiovascular disease diagnosis with a novel hybrid machine learning approach.
PeerJ Comput. Sci.
Beyhan Adanur Dedeturk, Bilge Kagan Dedeturk, Burcu Bakir-Gungor
2024 — conf
Classification of Breast Cancer Molecular Subtypes with Grouping-Scoring-Modeling Approach that Incorporates Disease-Disease Association Information.
SIU
Emma Qumsiyeh, Burcu Bakir-Gungor, Malik Yousef
2024 — conf
Graph-based Biomedical Knowledge Discovery.
SIU
Osman Altuner, Burcu Bakir-Gungor, Gokhan Bakal
2024 — conf
Metagenomic Data Analysis with Machine Learning to Discover Colorectal Cancer-Associated Enzymes.
SIU
Nur Sebnem Ersoz, Cihan Kuzudisli, Malik Yousef, Burcu Bakir-Gungor
2024 J jnl
Network anomaly detection using Deep Autoencoder and parallel Artificial Bee Colony algorithm-trained neural network.
PeerJ Comput. Sci.
Hilal Hacilar, Bilge Kagan Dedeturk, Burcu Bakir-Gungor, Vehbi Cagri Gungor
2024 J jnl
Novel Antimicrobial Peptide Design Using Motif Match Score Representation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ümmü Gülsüm Söylemez, Malik Yousef, Zülal Kesmen, Burcu Bakir-Gungor
2024 — conf
Prediction of Type 2 Diabetes using Metagenomic Data and Identification of Taxonomic Biomarkers.
SIU
Mustafa Temiz, Cihan Kuzudisli, Malik Yousef, Burcu Bakir-Gungor
2024 — conf
SEMANT - Feature Group Selection Utilizing FastText-Based Semantic Word Grouping, Scoring, and Modeling Approach for Text Classification.
DEXA (2)
Daniel Voskergian, Burcu Bakir-Gungor, Malik Yousef
2024 — conf
TextNetTopics-SFTS-SBTS: TextNetTopics Scoring Approaches Based Sequential Forward and Backward.
IWBBIO (2)
Daniel Voskergian, Burcu Bakir-Gungor, Malik Yousef
2023 J jnl
Ensemble feature selection and classification methods for machine learning-based coronary artery disease diagnosis.
Comput. Stand. Interfaces
Burak Kolukisa, Burcu Bakir-Gungor
2023 — conf
Prediction of Antimicrobial Peptides Using Deep Neural Networks.
BIOINFORMATICS
Ümmü Gülsüm Söylemez, Malik Yousef, Burcu Bakir-Gungor
2023 J jnl
PriPath: identifying dysregulated pathways from differential gene expression via grouping, scoring, and modeling with an embedded feature selection approach.
BMC Bioinform.
Malik Yousef, Fatma Ozdemir, Amhar Jaber, Jens Allmer, Burcu Bakir-Gungor
2023 — conf
miRcorrNetPro: Unraveling Algorithmic Insights through Cross-Validation in Multi-Omics Integration for Comprehensive Data Analysis.
BIBM
Miray Unlu Yazici, Malik Yousef, J. S. Marron, Burcu Bakir-Gungor
2022 J jnl
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yunus Emre Isik, Yasin Görmez, Zafer Aydin, Burcu Bakir-Gungor
2021 J jnl
Application of Biological Domain Knowledge Based Feature Selection on Gene Expression Data.
Entropy
Malik Yousef, Abhishek Kumar, Burcu Bakir-Gungor
2021 — conf
Integrating Gene Ontology Based Grouping and Ranking into the Machine Learning Algorithm for Gene Expression Data Analysis.
DEXA Workshops
Malik Yousef, Ahmet Sayici, Burcu Bakir-Gungor
2021 — conf
SVM-RCE-R-OPT: Optimization of Scoring Function for SVM-RCE-R.
DEXA Workshops
Malik Yousef, Amhar Jabeer, Burcu Bakir-Gungor
2020 — conf
A Top-Down Approach for Finding Affected Pathway Subnetworks in Type 2 Diabetes.
SIU
Miray Unlu Yazici, Burcu Bakir-Gungor
2020 — conf
An Ensemble Feature Selection Methodology That Incorporates Domain Knowledge for Cardiovascular Disease Diagnosis.
SIU
Burak Kolukisa, Vehbi Cagri Gungor, Burcu Bakir-Gungor
2020 J jnl
Inflammatory Bowel Disease Biomarkers of Human Gut Microbiota Selected via Ensemble Feature Selection Methods.
CoRR
Hilal Hacilar, Özkan Ufuk Nalbantoglu, Oya Aran, Burcu Bakir-Gungor
2020 J jnl
Recursive Cluster Elimination based Rank Function (SVM-RCE-R) implemented in KNIME.
F1000Research
Malik Yousef, Burcu Bakir-Gungor, Amhar Jabeer, Gokhan Goy, Rehman Qureshi, Louise C. Showe
2019 J jnl
Expanding Label Sets for Graph Convolutional Networks.
CoRR
Mustafa Coskun, Burcu Bakir-Gungor, Mehmet Koyutürk
2019 — conf
In-Silico Identification of Papillary Thyroid Carcinoma Molecular Mechanisms.
SIU
Nur Sebnem Ersoz, Yasin Guzel, Burcu Bakir-Gungor
2019 — conf
In-Silico Methods to Identify Common MicroRNAs and Pathways of Neuromuscular Diseases.
SIU
Miray Unlu Yazici, Evrim Aksu Menges, Yeliz Z. Akkaya Ulum, Burcu Balcihayta, Burcu Bakir-Gungor
2018 — conf
Evaluation of Classification Algorithms, Linear Discriminant Analysis and a New Hybrid Feature Selection Methodology for the Diagnosis of Coronary Artery Disease.
IEEE BigData
Burak Kolukisa, Hilal Hacilar, Gokhan Goy, Mustafa Kus, Burcu Bakir-Gungor, Atilla Aral, Vehbi Cagri Gungor
2014 J jnl
HomSI: a homozygous stretch identifier from next-generation sequencing data.
Bioinform.
Zeliha Görmez, Burcu Bakir-Gungor, Mahmut Samil Sagiroglu
2014 J jnl
PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data.
Bioinform.
Burcu Bakir-Gungor, Ece Egemen, Osman Ugur Sezerman
2012 — —
Bioinformatics approaches to associate single nucleotide polymorphisms with human diseases according to their pathway related context (Tek nükleotid polimorfizmlerini yolaklar üzerinden insan hastalıkları ile ilişkilendirmek için biyoinformatik yöntemler)
Burcu Bakir-Gungor
2009 J jnl
The Rat Genome Database 2009: variation, ontologies and pathways.
Nucleic Acids Res.
Melinda R. Dwinell, Elizabeth A. Worthey, Mary Shimoyama, Burcu Bakir-Gungor, Jeffrey DePons, Stanley J. F. Laulederkind, Timothy Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Alexander Stoddard, Simon N. Twigger, Howard J. Jacob