Brian Yuan Chen

13 papers Journal 3Unranked 10
YearRankTypeTitle / Venue / Authors
2016 — conf
A map of binding cavity conformations reveals differences in binding specificity.
BIBM
Ziyi Guo, Brian Yuan Chen
2015 — conf
A statistical model of electrostatic isopotential variation in serine protease binding cavities.
BIBM
Rachel Y. Okun, Brian Yuan Chen
2015 J jnl
Conformational Sampling Reveals Amino Acids with a Steric Influence on Specificity.
J. Comput. Biol.
Ziyi Guo, Brian Yuan Chen
2015 — conf
Predicting protein-ligand binding specificity based on ensemble clustering.
BIBM
Ziyi Guo, Brian Yuan Chen
2015 — conf
Superposition of protein structures using electrostatic isopotentials.
BIBM
Ziyi Guo, Katya Scheinberg, Juliana Hong, Brian Yuan Chen
2014 — conf
A flexible volumetric comparison of protein cavities can reveal patterns in ligand binding specificity.
BCB
Ziyi Guo, Trevor Kuhlengel, Steven R. Stinson, Seth Blumenthal, Brian Yuan Chen, Soutir Bandyopadhyay
2014 — conf
A gesture-based interface for the exploration and classification of protein binding cavities.
MARS@MobiSys
Zachary A. Daniels, Steven R. Stinson, Shenchi Tian, Evan Mulbry, Brian Yuan Chen
2014 — conf
Variational Bayesian clustering on protein cavity conformations for detecting influential amino acids.
BCB
Ziyi Guo, Brian Yuan Chen
2013 J jnl
Isolating Influential Regions of Electrostatic Focusing in Protein and DNA Structure.
IEEE ACM Trans. Comput. Biol. Bioinform.
Seth Blumenthal, Yisheng Tang, Wenjie Yang, Brian Yuan Chen
2012 J jnl
A Regionalizable Statistical Model of Intersecting Regions in protein-ligand binding Cavities.
J. Bioinform. Comput. Biol.
Brian Yuan Chen, Soutir Bandyopadhyay
2012 — conf
Aligning ligand binding cavities by optimizing superposed volume.
BIBM
Ruobing Chen, Katya Scheinberg, Brian Yuan Chen
2011 — conf
A statistical model of overlapping volume in ligand binding cavities.
BIBM Workshops
Brian Yuan Chen, Soutir Bandyopadhyay
2011 — conf
VASP-S: A Volumetric Analysis and Statistical Model for Predicting Steric Influences on Protein-Ligand Binding Specificity.
BIBM
Brian Yuan Chen, Soutir Bandyopadhyay