Brian D. Marsden

14 papers B 1Journal 13
YearRankTypeTitle / Venue / Authors
2025 B conf
Automated LLM Deployment and Evaluation: A Cloud-Native Approach Using LLM-as-a-Judge.
CLOUD
Ansar Rafique, Brian D. Marsden
2025 J jnl
Fragmenstein: predicting protein-ligand structures of compounds derived from known crystallographic fragment hits using a strict conserved-binding-based methodology.
J. Cheminformatics
Matteo P. Ferla, Ruben Sanchez-Garcia, Rachael Skyner, Stefan Gahbauer, Jenny C. Taylor, Frank von Delft, Brian D. Marsden, Charlotte M. Deane
2025 J jnl
MolSnapper: Conditioning Diffusion for Structure-Based Drug Design.
J. Chem. Inf. Model.
Yael Ziv, Fergus Imrie, Brian D. Marsden, Charlotte M. Deane
2025 J jnl
Robustly interrogating machine learning-based scoring functions: what are they learning?
Bioinform.
Guy Durant, Fergus Boyles, Kristian Birchall, Brian D. Marsden, Charlotte M. Deane
2023 J jnl
COMBATdb: a database for the COVID-19 Multi-Omics Blood ATlas.
Nucleic Acids Res.
Dapeng Wang, Vinod Kumar, Katie L. Burnham, Alexander J. Mentzer, Brian D. Marsden, Julian C. Knight
2022 J jnl
Fragment Hotspot Mapping to Identify Selectivity-Determining Regions between Related Proteins.
J. Chem. Inf. Model.
Mihaela D. Smilova, Peter R. Curran, Chris J. Radoux, Frank von Delft, Jason C. Cole, Anthony R. Bradley, Brian D. Marsden
2020 J jnl
Hotspots API: A Python Package for the Detection of Small Molecule Binding Hotspots and Application to Structure-Based Drug Design.
J. Chem. Inf. Model.
Peter R. Curran, Chris J. Radoux, Mihaela D. Smilova, Richard A. Sykes, Alicia P. Higueruelo, Anthony R. Bradley, Brian D. Marsden, David R. Spring, Tom L. Blundell, Andrew R. Leach, William R. Pitt, Jason C. Cole
2020 J jnl
MichelaNglo: sculpting protein views on web pages without coding.
Bioinform.
Matteo P. Ferla, Alistair T. Pagnamenta, David R. Damerell, Jenny C. Taylor, Brian D. Marsden
2019 J jnl
SATurn: a modular bioinformatics framework for the design of robust maintainable web-based and standalone applications.
Bioinform.
David R. Damerell, Claire Strain-Damerell, Sefa Garsot, Stephen P. Joyce, Paul Barrett, Brian D. Marsden
2019 J jnl
UbiHub: a data hub for the explorers of ubiquitination pathways.
Bioinform.
Lihua Liu, David R. Damerell, Leonidas Koukouflis, Yufeng Tong, Brian D. Marsden, Matthieu Schapira
2015 J jnl
WONKA: objective novel complex analysis for ensembles of protein-ligand structures.
J. Comput. Aided Mol. Des.
Anthony R. Bradley, Ian D. Wall, Frank von Delft, Darren V. S. Green, Charlotte M. Deane, Brian D. Marsden
2014 J jnl
OOMMPPAA: A Tool To Aid Directed Synthesis by the Combined Analysis of Activity and Structural Data.
J. Chem. Inf. Model.
Anthony R. Bradley, Ian D. Wall, Darren V. S. Green, Charlotte M. Deane, Brian D. Marsden
2012 J jnl
ChromoHub: a data hub for navigators of chromatin-mediated signalling.
Bioinform.
Lihua Liu, Xi Ting Zhen, Emily Denton, Brian D. Marsden, Matthieu Schapira
2010 J jnl
Structural genomics of histone tail recognition.
Bioinform.
Minghua Wang, Man Wai Mok, Hong Harper, Wen Hwa Lee, Jinrong Min, Stefan Knapp, Udo C. T. Oppermann, Brian D. Marsden, Matthieu Schapira