Boris Aguilar

14 papers Journal 11Unranked 3
YearRankTypeTitle / Venue / Authors
2025 J jnl
Digital twin models for predicting venetoclax and azacitidine-induced neutropenia in patients with acute myeloid leukemia.
npj Digit. Medicine
Yue Zhang, Jonathan Martinez, Bahar Tercan, Heikki Kuusanmäki, Frank Emmert-Streib, Jerome G. Chandraseelan, Amer Farea, Olli Yli-Harja, Caroline A. Heckman, David L. Gibbs, Vesteinn Thorsson, Ilya Shmulevich, Mika Kontro, Guangrong Qin, Boris Aguilar
2025 J jnl
LM-Merger: a workflow for merging logical models with an application to gene regulatory network models.
BMC Bioinform.
Luna Xingyu Li, Boris Aguilar, John H. Gennari, Guangrong Qin
2024 J jnl
A framework towards digital twins for type 2 diabetes.
Frontiers Digit. Health
Yue Zhang, Guangrong Qin, Boris Aguilar, Noa Rappaport, James T. Yurkovich, Lance Pflieger, Sui Huang, Leroy Hood, Ilya Shmulevich
2023 J jnl
Characterizing the Impact of Communication on Cellular and Collective Behavior Using a Three-Dimensional Multiscale Cellular Model.
Entropy
Moriah Echlin, Boris Aguilar, Ilya Shmulevich
2022 J jnl
Exploring approaches for predictive cancer patient digital twins: Opportunities for collaboration and innovation.
Frontiers Digit. Health
Eric A. Stahlberg, Mohamed Abdel-Rahman, Boris Aguilar, Alireza Asadpoure, Robert A. Beckman, Lynn L. Borkon, Jeffrey N. Bryan, Colleen M. Cebulla, Young Hwan Chang, Ansu Chatterjee, Jun Deng, Sepideh Dolatshahi, Olivier Gevaert, Emily J. Greenspan, Wenrui Hao, Tina Hernandez-Boussard, Pamela R. Jackson, Marieke L. Kuijjer, Adrian Lee, Paul Macklin, Subha Madhavan, Matthew D. McCoy, Navid Mohammad Mirzaei, Talayeh Razzaghi, Heber L. Rocha, Leili Shahriyari, Ilya Shmulevich, Daniel G. Stover, Yi Sun, Tanveer F. Syeda-Mahmood, Jinhua Wang, Qi Wang, Ioannis K. Zervantonakis
2020 — conf
Multi-omics characterization of Microtubule-actin cross linking factor 1 (MACF1) using the ISB-Cancer Genomics Cloud.
BCB
Dondra Bailey, Kawther Abdilleh, Boris Aguilar, Alexis McClary
2020 — conf
Multi-omics data integration in the Cloud: Analysis of Statistically Significant Associations Between Clinical and Molecular Features in Breast Cancer.
BCB
Kawther Abdilleh, Boris Aguilar, J. Ross Thomson
2018 J jnl
Flexibility of Boolean Network Reservoir Computers in Approximating Arbitrary Recursive and Non-Recursive Binary Filters.
Entropy
Moriah Echlin, Boris Aguilar, Max Notarangelo, David L. Gibbs, Ilya Shmulevich
2016 J jnl
Identification of control targets in Boolean molecular network models via computational algebra.
BMC Syst. Biol.
David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Reinhard C. Laubenbacher
2014 — conf
Dimension Reduction of Large Sparse AND-NOT Network Models.
SASB
Alan Veliz-Cuba, Boris Aguilar, Reinhard C. Laubenbacher
2014 J jnl
Steady state analysis of Boolean molecular network models via model reduction and computational algebra.
BMC Bioinform.
Alan Veliz-Cuba, Boris Aguilar, Franziska Hinkelmann, Reinhard C. Laubenbacher
2013 J jnl
Boolean nested canalizing functions: A comprehensive analysis.
Theor. Comput. Sci.
Yuan Li, John O. Adeyeye, David Murrugarra, Boris Aguilar, Reinhard C. Laubenbacher
2013 J jnl
Dimension Reduction of Large AND-NOT Network Models.
CoRR
Alan Veliz-Cuba, Reinhard C. Laubenbacher, Boris Aguilar
2012 J jnl
Modeling stochasticity and variability in gene regulatory networks.
EURASIP J. Bioinform. Syst. Biol.
David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Seda Arat, Reinhard C. Laubenbacher