Bonnie Kirkpatrick

26 papers A* 1B 4C 2Journal 14Unranked 4
YearRankTypeTitle / Venue / Authors
2017 J jnl
Design of nucleic acid strands with long low-barrier folding pathways.
Nat. Comput.
Anne Condon, Bonnie Kirkpatrick, Ján Manuch
2016 J jnl
Fast Computation of the Kinship Coefficients.
CoRR
Bonnie Kirkpatrick
2016 — conf
Haplotype Inference for Pedigrees with Few Recombinations.
ISBRA
Bonnie Kirkpatrick
2016 J jnl
Haplotype Inference for Pedigrees with Few Recombinations.
CoRR
Bonnie Kirkpatrick
2014 A* conf
Efficient Continuous-Time Markov Chain Estimation.
ICML
Monir Hajiaghayi, Bonnie Kirkpatrick, Liangliang Wang, Alexandre Bouchard-Côté
2014 J jnl
Perfect Phylogeny Problems with Missing Values.
IEEE ACM Trans. Comput. Biol. Bioinform.
Bonnie Kirkpatrick, Kristian Stevens
2014 J jnl
Reachability bounds for chemical reaction networks and strand displacement systems.
Nat. Comput.
Anne Condon, Bonnie Kirkpatrick, Ján Manuch
2012 — conf
Bayesian Pedigree Analysis using Measure Factorization.
NIPS
Bonnie Kirkpatrick, Alexandre Bouchard-Côté
2012 J jnl
Comparing Pedigree Graphs.
J. Comput. Biol.
Bonnie Kirkpatrick, Yakir Reshef, Hilary K. Finucane, Haitao Jiang, Binhai Zhu, Richard M. Karp
2012 — conf
Non-identifiable Pedigrees and a Bayesian Solution.
ISBRA
Bonnie Kirkpatrick
2012 J jnl
Optimal State-Space Reduction for Pedigree Hidden Markov Models
CoRR
Bonnie Kirkpatrick, Kay Kirkpatrick
2012 B conf
Reachability Bounds for Chemical Reaction Networks and Strand Displacement Systems.
DNA
Anne Condon, Bonnie Kirkpatrick, Ján Manuch
2011 — —
Algorithms for Human Genetics.
Bonnie Kirkpatrick
2011 C conf
Efficiently Solvable Perfect Phylogeny Problems on Binary and k-State Data with Missing Values.
WABI
Kristian Stevens, Bonnie Kirkpatrick
2011 J jnl
Haplotypes versus genotypes on pedigrees.
Algorithms Mol. Biol.
Bonnie Kirkpatrick
2011 B conf
Pedigree Reconstruction Using Identity by Descent.
RECOMB
Bonnie Kirkpatrick, Shuai Cheng Li, Richard M. Karp, Eran Halperin
2011 J jnl
Pedigree Reconstruction Using Identity by Descent.
J. Comput. Biol.
Bonnie Kirkpatrick, Shuai Cheng Li, Richard M. Karp, Eran Halperin
2010 J jnl
Algorithms for Comparing Pedigree Graphs
CoRR
Bonnie Kirkpatrick, Yakir Reshef, Hilary K. Finucane, Haitao Jiang, Binhai Zhu, Richard M. Karp
2010 J jnl
Haplotype Inference in Complex Pedigrees.
J. Comput. Biol.
Bonnie Kirkpatrick, Eran Halperin, Richard M. Karp
2010 C conf
Haplotypes versus Genotypes on Pedigrees.
WABI
Bonnie Kirkpatrick
2009 B conf
Haplotype Inference in Complex Pedigrees.
RECOMB
Bonnie Kirkpatrick, Javier Rosa, Eran Halperin, Richard M. Karp
2007 J jnl
HAPLOPOOL: improving haplotype frequency estimation through DNA pools and phylogenetic modeling.
Bioinform.
Bonnie Kirkpatrick, Carlos Santos Armendariz, Richard M. Karp, Eran Halperin
2005 J jnl
Using Motion Planning to Study RNA Folding Kinetics.
J. Comput. Biol.
Xinyu Tang, Bonnie Kirkpatrick, Shawna L. Thomas, Guang Song, Nancy M. Amato
2004 B conf
Using motion planning to study RNA folding kinetics.
RECOMB
Xinyu Tang, Bonnie Kirkpatrick, Shawna L. Thomas, Guang Song, Nancy M. Amato
2003 J jnl
A New Method for Mapping Discontinuous Antibody Epitopes to Reveal Structural Features of Proteins.
J. Comput. Biol.
Brendan Mumey, Brian W. Bailey, Bonnie Kirkpatrick, Algirdas J. Jesaitis, Thomas Angel, Edward A. Dratz
2003 — conf
Mapping Discontinuous Antibody Epitopes to Reveal Protein Structure and Changes in Structure Related to Function.
CSB
Brendan Mumey, Thomas Angel, Bonnie Kirkpatrick, Brian W. Bailey, P. Hargrave, Algirdas J. Jesaitis, Edward A. Dratz