Bo Yu

15 papers Journal 13Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
A resource description framework (RDF) model of named entity co-occurrences in biomedical literature and its integration with PubChemRDF.
J. Cheminformatics
Qingliang Li, Sunghwan Kim, Leonid Zaslavsky, Tiejun Cheng, Bo Yu, Evan E. Bolton
2025 — conf
PubChemRDF on the Google Cloud Platform.
SWAT4HCLS
Sunghwan Kim, Bo Yu, Jia He, Qingliang Li, Tiejun Cheng, Siqian He, Hannah Bast, Johannes Kalmbach, Evan E. Bolton
2024 J jnl
PubChem synonym filtering process using crowdsourcing.
J. Cheminformatics
Sunghwan Kim, Bo Yu, Qingliang Li, Evan E. Bolton
2023 J jnl
PubChem 2023 update.
Nucleic Acids Res.
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan E. Bolton
2023 — conf
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF.
SWAT4HCLS
Qingliang Li, Sunghwan Kim, Leonid Zaslavsky, Tiejun Cheng, Bo Yu, Evan E. Bolton
2021 J jnl
Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem.
Frontiers Res. Metrics Anal.
Leonid Zaslavsky, Tiejun Cheng, Asta Gindulyte, Siqian He, Sunghwan Kim, Qingliang Li, Paul A. Thiessen, Bo Yu, Evan Bolton
2021 J jnl
PubChem in 2021: new data content and improved web interfaces.
Nucleic Acids Res.
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
2019 J jnl
PubChem 2019 update: improved access to chemical data.
Nucleic Acids Res.
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
2018 J jnl
An update on PUG-REST: RESTful interface for programmatic access to PubChem.
Nucleic Acids Res.
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Evan Bolton
2017 J jnl
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.
Nucleic Acids Res.
Aron Marchler-Bauer, Bo Yu, Lianyi Han, Jane He, Christopher J. Lanczycki, Shennan Lu, Farideh Chitsaz, Myra K. Derbyshire, Renata C. Geer, Noreen R. Gonzales, Marc Gwadz, David I. Hurwitz, Fu Lu, Gabriele H. Marchler, James S. Song, Narmada Thanki, Zhouxi Wang, Roxanne A. Yamashita, Dachuan Zhang, Chanjuan Zheng, Lewis Y. Geer, Stephen H. Bryant
2016 J jnl
Literature information in PubChem: associations between PubChem records and scientific articles.
J. Cheminformatics
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Benjamin A. Shoemaker, Jiyao Wang, Evan Bolton, Yanli Wang, Stephen H. Bryant
2016 J jnl
PubChem Substance and Compound databases.
Nucleic Acids Res.
Sunghwan Kim, Paul A. Thiessen, Evan Bolton, Jie Chen, Gang Fu, Asta Gindulyte, Lianyi Han, Jane He, Siqian He, Benjamin A. Shoemaker, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant
2015 J jnl
PubChem structure-activity relationship (SAR) clusters.
J. Cheminformatics
Sunghwan Kim, Lianyi Han, Bo Yu, Volker Hähnke, Evan Bolton, Stephen H. Bryant
2011 J jnl
PubChem3D: a new resource for scientists.
J. Cheminformatics
Evan Bolton, Jie Chen, Sunghwan Kim, Lianyi Han, Siqian He, Wenyao Shi, Vahan Simonyan, Yan Sun, Paul A. Thiessen, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant
2004 J jnl
Pulse-coupled neural networks for contour and motion matchings.
IEEE Trans. Neural Networks
Bo Yu, Liming Zhang