Birte Kehr

17 papers B 2C 1Misc 1Journal 12
YearRankTypeTitle / Venue / Authors
2024 J jnl
GGTyper: genotyping complex structural variants using short-read sequencing data.
Bioinform.
Tim Mirus, Robert Lohmayer, Clementine Döhring, Bjarni V. Halldórsson, Birte Kehr
2024 B conf
How Do Users Design Scientific Workflows? The Case of Snakemake and Nextflow.
SSDBM
Sebastian Pohl, Nourhan Elfaramawy, Artur Miling, Kedi Cao, Birte Kehr, Matthias Weidlich
2023 B conf
From Program Chains to Exploratory Workflows: PopinSnake for Genomic Insertion Detection.
e-Science
Kedi Cao, Nourhan Elfaramawy, Matthias Weidlich, Birte Kehr
2023 J jnl
How do users design scientific workflows? The Case of Snakemake.
CoRR
Sebastian Pohl, Nourhan Elfaramawy, Kedi Cao, Birte Kehr, Matthias Weidlich
2022 J jnl
Population-scale detection of non-reference sequence variants using colored de Bruijn graphs.
Bioinform.
Thomas Krannich, W. Timothy J. White, Sebastian Niehus, Guillaume Holley, Bjarni V. Halldórsson, Birte Kehr
2021 J jnl
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data.
Bioinform.
Julia Markowski, Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcarate, Gesa Loof, Birte Kehr, Ana Pombo, Sven Rahmann, Roland F. Schwarz
2021 J jnl
The Collaborative Research Center FONDA.
Datenbank-Spektrum
Ulf Leser, Marcus Hilbrich, Claudia Draxl, Peter Eisert, Lars Grunske, Patrick Hostert, Dagmar Kainmüller, Odej Kao, Birte Kehr, Timo Kehrer, Christoph Koch, Volker Markl, Henning Meyerhenke, Tilmann Rabl, Alexander Reinefeld, Knut Reinert, Kerstin Ritter, Björn Scheuermann, Florian Schintke, Nicole Schweikardt, Matthias Weidlich
2017 J jnl
popSTR: population-scale detection of STR variants.
Bioinform.
Snædís Kristmundsdóttir, Brynja D. Sigurpálsdóttir, Birte Kehr, Bjarni V. Halldórsson
2016 J jnl
PopIns: population-scale detection of novel sequence insertions.
Bioinform.
Birte Kehr, Páll Melsted, Bjarni V. Halldórsson
2016 J jnl
chopBAI: BAM index reduction solves I/O bottlenecks in the joint analysis of large sequencing cohorts.
Bioinform.
Birte Kehr, Páll Melsted
2014 — —
Contributions to computing and modeling multiple whole-genome alignments.
Birte Kehr
2014 J jnl
Genome alignment with graph data structures: a comparison.
BMC Bioinform.
Birte Kehr, Kathrin Trappe, Manuel Holtgrewe, Knut Reinert
2014 J jnl
NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
Bioinform.
Jialu Hu, Birte Kehr, Knut Reinert
2012 C conf
Hidden Breakpoints in Genome Alignments.
WABI
Birte Kehr, Knut Reinert, Aaron E. Darling
2011 J jnl
Determination of Glycan Structure from Tandem Mass Spectra.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sebastian Böcker, Birte Kehr, Florian Rasche
2011 J jnl
STELLAR: fast and exact local alignments.
BMC Bioinform.
Birte Kehr, David Weese, Knut Reinert
2009 Misc conf
Determination of Glycan Structure from Tandem Mass Spectra.
COCOON
Sebastian Böcker, Birte Kehr, Florian Rasche