Bing Zhang

24 papers C 1Journal 19Unranked 3
YearRankTypeTitle / Venue / Authors
2022 J jnl
OmicsEV: a tool for comprehensive quality evaluation of omics data tables.
Bioinform.
Bo Wen, Eric J. Jaehnig, Bing Zhang
2022 — conf
Weakly Unpaired Image Translation from Hematoxylin and Eosin Staining Image to Immunohistochemistry Staining Image.
BIBM
Kuan Huang, Yifei Cheng, Qiang Gao, Bing Zhang
2021 J jnl
A community effort to identify and correct mislabeled samples in proteogenomic studies.
Patterns
Seungyeul Yoo, Zhiao Shi, Bo Wen, Soon Jye Kho, Renke Pan, Hanying Feng, Hong Chen, Anders Carlsson, Patrik Edén, Weiping Ma, Michael L. Raymer, Ezekiel J. Maier, Zivana Tezak, Elaine Johanson, Denise Hinton, Henry Rodriguez, Jun Zhu, Emily Boja, Pei Wang, Bing Zhang
2018 J jnl
DLAD4U: deriving and prioritizing disease lists from PubMed literature.
BMC Bioinform.
Junhui Shen, Suhas V. Vasaikar, Bing Zhang
2018 J jnl
LinkedOmics: analyzing multi-omics data within and across 32 cancer types.
Nucleic Acids Res.
Suhas V. Vasaikar, Peter Straub, Jing Wang, Bing Zhang
2017 J jnl
WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit.
Nucleic Acids Res.
Jing Wang, Suhas V. Vasaikar, Zhiao Shi, Michael Greer, Bing Zhang
2016 J jnl
PGA: an R/Bioconductor package for identification of novel peptides using a customized database derived from RNA-Seq.
BMC Bioinform.
Bo Wen, Shaohang Xu, Ruo Zhou, Bing Zhang, Xiaojing Wang, Xin Liu, Xun Xu, Siqi Liu
2015 J jnl
Empowering biologists with multi-omics data: colorectal cancer as a paradigm.
Bioinform.
Jing Zhu, Zhiao Shi, Jing Wang, Bing Zhang
2013 J jnl
WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013.
Nucleic Acids Res.
Jing Wang, Dexter T. Duncan, Zhiao Shi, Bing Zhang
2012 J jnl
Advances in systems biology: computational algorithms and applications.
BMC Syst. Biol.
Yufei Huang, Zhongming Zhao, Hua Xu, Yu Shyr, Bing Zhang
2011 J jnl
Fast network centrality analysis using GPUs.
BMC Bioinform.
Zhiao Shi, Bing Zhang
2011 — ch.
Modules in Biological Networks: Identification and Application.
Handbook of Research on Computational and Systems Biology
Bing Zhang, Zhiao Shi
2011 J jnl
Semi-supervised learning improves gene expression-based prediction of cancer recurrence.
Bioinform.
Mingguang Shi, Bing Zhang
2010 J jnl
Co-expression module analysis reveals biological processes, genomic gain, and regulatory mechanisms associated with breast cancer progression.
BMC Syst. Biol.
Zhiao Shi, Catherine K. Derow, Bing Zhang
2010 J jnl
Enabling proteomics-based identification of human cancer variations.
BMC Bioinform.
Jing Li, Zeqiang Ma, Robbert J. C. Slebos, David L. Tabb, Daniel C. Liebler, Bing Zhang
2010 J jnl
WebGestalt2: an updated and expanded version of the Web-based Gene Set Analysis Toolkit.
BMC Bioinform.
Dexter T. Duncan, Naresh Prodduturi, Bing Zhang
2009 — conf
Network Approaches for Shotgun Proteomics Data Analysis.
IJCBS
Bing Zhang, Jing Li, David L. Tabb, Byung-Hoon Park
2008 J jnl
From pull-down data to protein interaction networks and complexes with biological relevance.
Bioinform.
Bing Zhang, Byung-Hoon Park, Tatiana V. Karpinets, Nagiza F. Samatova
2008 J jnl
Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes.
Bioinform.
Xi Chen, Lily Wang, Jonathan D. Smith, Bing Zhang
2008 C conf
The gene-function relationship in the metabolism of yeast and digital organisms.
ALIFE
Philip Gerlee, Torbjörn Lundh, Bing Zhang, Alexander R. A. Anderson
2007 — conf
Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance.
BIBM
Byung-Hoon Park, Bing Zhang, Tatiana V. Karpinets, Nagiza F. Samatova
2005 J jnl
GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments.
BMC Bioinform.
S. A. Kirov, Xinxia Peng, E. Baker, Denise Schmoyer, Bing Zhang, Jay Snoddy
2005 J jnl
WebGestalt: an integrated system for exploring gene sets in various biological contexts.
Nucleic Acids Res.
Bing Zhang, Stefan Kirov, Jay Snoddy
2004 J jnl
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies.
BMC Bioinform.
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Snoddy