Bing Ren

52 papers A 1B 3Misc 1Journal 43Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
Physics-informed neural networks with multi-scale adaptive Fourier encoding for lithium-ion battery modeling: Spatiotemporal radial concentration field reconstruction and multi-rate voltage prediction.
Eng. Appl. Artif. Intell.
Bing Ren, Kejia Zhuang, Zunqi Xiao
2025 J jnl
A WCSPH-MSDEM model for combined rolling and sliding motions of complex-shaped blocks in an unsteady flow.
J. Comput. Phys.
Sen Gao, Bing Ren, Pengzhi Lin, Ping Dong
2025 J jnl
CPAA: Self-Supervised Cross-View Prediction With Automatic Augmentation for OFDM Modulation Classification.
IEEE Trans. Veh. Technol.
Bing Ren, Zhengyang Su, Kah Chan Teh, Hongyang An, Erry Gunawan, Alex C. Kot
2025 J jnl
Cross-Modality Learning for Predicting IHC Biomarkers from H&E-Stained Whole-Slide Images.
CoRR
Amit Das, Naofumi Tomita, Kyle J. Syme, Weijie Ma, Paige O'Connor, Kristin N. Corbett, Bing Ren, Xiaoying Liu, Saeed Hassanpour
2025 J jnl
FAIR sharing of Chromatin Tracing datasets using the newly developed 4DN FISH Omics Format.
CoRR
Rahi Navelkar, Andrea Cosolo, Bogdan Bintu, Yubao Cheng, Vincent Gardeux, Silvia Gutnik, Taihei Fujimori, Antonina Hafner, Atishay Jay, Bojing Blair Jia, Adam Paul Jussila, Gerard Llimos, Antonios Lioutas, Nuno MC Martins, William J. Moore, Yodai Takei, Frances Wong, Kaifu Yang, Huaiying Zhang, Quan Zhu, Magda Bienko, Lacramioara Bintu, Long Cai, Bart Deplancke, Marcelo Nollmann, Susan E. Mango, Bing Ren, Peter J. Park, Ahilya N. Sawh, Andrew Schroeder, Jason R. Swedlow, Golnaz Vahedi, Chao-Ting Wu, Sarah Aufmkolk, Alistair N. Boettiger, Irene Farabella, Caterina Strambio-De-Castillia, Siyuan Wang
2024 — conf
A 0.8-V-VIN 3.76-nW 23.1-ppm/°C Low Dropout Regulator Based on Flipped Voltage Follower with Embedded CMOS Voltage Reference.
ICTA
Bing Ren, Chenchang Zhan, Fujun Liu
2024 J jnl
A Benchmark for Long-Form Medical Question Answering.
CoRR
Pedram Hosseini, Jessica M. Sin, Bing Ren, Bryceton G. Thomas, Elnaz Nouri, Ali Farahanchi, Saeed Hassanpour
2024 J jnl
A Fast IAA-Based SR-STAP Method for Airborne Radar.
Remote. Sens.
Shuguang Zhang, Tong Wang, Cheng Liu, Bing Ren
2024 J jnl
Deep Learning for Classification of Inflammatory Bowel Disease Activity in Whole Slide Images of Colonic Histopathology.
CoRR
Amit Das, Tanmay Shukla, Naofumi Tomita, Ryland Richards, Laura Vidis, Bing Ren, Saeed Hassanpour
2024 J jnl
MIMO-OFDM Modulation Classification Using 4D2DConvNet for 5G Communications.
IEEE Wirel. Commun. Lett.
Bing Ren, Kah Chan Teh, Hongyang An, Erry Gunawan
2024 J jnl
OFDM Modulation Classification Using Cross-SKNet With Blind IQ Imbalance and Carrier Frequency Offset Compensation.
IEEE Trans. Veh. Technol.
Bing Ren, Kah Chan Teh, Hongyang An, Erry Gunawan
2023 J jnl
A Novel Fast Sparse Bayesian Learning STAP Algorithm for Conformal Array Radar.
Remote. Sens.
Bing Ren, Tong Wang
2023 J jnl
Automatic Modulation Recognition of Dual-Component Radar Signals Using ResSwinT-SwinT Network.
IEEE Trans. Aerosp. Electron. Syst.
Bing Ren, Kah Chan Teh, Hongyang An, Erry Gunawan
2023 J jnl
Observer-Based Model-Free Adaptive Sliding Mode Predictive Control.
IEEE Access
Bing Ren, Guangqing Bao
2023 J jnl
SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C data.
Briefings Bioinform.
Lindsay Lee, Miao Yu, Xiaoqi Li, Chenxu Zhu, Yanxiao Zhang, Hongyu Yu, Ziyin Chen, Shreya Mishra, Bing Ren, Yun Li, Ming Hu
2022 J jnl
A Clutter Suppression Algorithm via Weighted ${\ell }_2{\rm{ - norm}}$ Penalty for Airborne Radar.
IEEE Signal Process. Lett.
Cheng Liu, Tong Wang, Shuguang Zhang, Bing Ren
2022 J jnl
A Fast Space-Time Adaptive Processing Algorithm Based on Sparse Bayesian Learning for Airborne Radar.
Sensors
Cheng Liu, Tong Wang, Shuguang Zhang, Bing Ren
2022 J jnl
Space-Time Adaptive Processing Based on Modified Sparse Learning via Iterative Minimization for Conformal Array Radar.
Sensors
Bing Ren, Tong Wang
2021 B conf
A Petri Dish for Histopathology Image Analysis.
AIME
Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour
2021 J jnl
A Petri Dish for Histopathology Image Analysis.
CoRR
Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour
2021 J jnl
A multiclass classification using one-versus-all approach with the differential partition sampling ensemble.
Eng. Appl. Artif. Intell.
Xin Gao, Yang He, Mi Zhang, Xinping Diao, Xiao Jing, Bing Ren, Weijia Ji
2021 A conf
Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification.
WACV
Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Mustafa Nasir-Moin, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour
2020 J jnl
An ensemble imbalanced classification method based on model dynamic selection driven by data partition hybrid sampling.
Expert Syst. Appl.
Xin Gao, Bing Ren, Hao Zhang, Bohao Sun, Junliang Li, Jianhang Xu, Yang He, Kangsheng Li
2020 J jnl
Development and Evaluation of a Deep Neural Network for Histologic Classification of Renal Cell Carcinoma on Biopsy and Surgical Resection Slides.
CoRR
Mengdan Zhu, Bing Ren, Ryland Richards, Matthew A. Suriawinata, Naofumi Tomita, Saeed Hassanpour
2020 B conf
Difficulty Translation in Histopathology Images.
AIME
Jerry W. Wei, Arief A. Suriawinata, Xiaoying Liu, Bing Ren, Mustafa Nasir-Moin, Naofumi Tomita, Jason Wei, Saeed Hassanpour
2020 J jnl
Difficulty Translation in Histopathology Images.
CoRR
Jerry W. Wei, Arief A. Suriawinata, Xiaoying Liu, Bing Ren, Mustafa Nasir-Moin, Naofumi Tomita, Jason Wei, Saeed Hassanpour
2020 J jnl
Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification.
CoRR
Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Mustafa Nasir-Moin, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour
2020 J jnl
The changing mouse embryo transcriptome at whole tissue and single-cell resolution.
Nat.
Peng He, Brian A. Williams, Diane Trout, Georgi K. Marinov, Henry Amrhein, Libera Berghella, Say-Tar Goh, Ingrid Plajzer-Frick, Veena Afzal, Len A. Pennacchio, Diane E. Dickel, Axel Visel, Bing Ren, Ross C. Hardison, Yu Zhang, Barbara J. Wold
2019 J jnl
Automated detection of celiac disease on duodenal biopsy slides: a deep learning approach.
CoRR
Jason W. Wei, Jerry W. Wei, Christopher R. Jackson, Bing Ren, Arief A. Suriawinata, Saeed Hassanpour
2019 B conf
Comparing 3D Genome Organization in Multiple Species Using Phylo-HMRF.
RECOMB
Yang Yang, Yang Zhang, Bing Ren, Jesse R. Dixon, Jian Ma
2019 J jnl
Deep neural networks for automated classification of colorectal polyps on histopathology slides: A multi-institutional evaluation.
CoRR
Jason W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Naofumi Tomita, Behnaz Abdollahi, Adam S. Kim, Dale C. Snover, John A. Baron, Elizabeth L. Barry, Saeed Hassanpour
2019 — conf
Generative Image Translation for Data Augmentation in Colorectal Histopathology Images.
ML4H@NeurIPS
Jerry W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Jason Wei, Saeed Hassanpour
2019 J jnl
Generative Image Translation for Data Augmentation in Colorectal Histopathology Images.
CoRR
Jerry W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Jason Wei, Saeed Hassanpour
2019 J jnl
MAPS: Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments.
PLoS Comput. Biol.
Ivan Juric, Miao Yu, Armen Abnousi, Ramya Raviram, Rongxin Fang, Yuan Zhao, Yan-Xiao Zhang, Yunjiang Qiu, Yuchen Yang, Yun Li, Bing Ren, Ming Hu
2019 J jnl
Parallel Distributed Logistic Regression for Vertical Federated Learning without Third-Party Coordinator.
CoRR
Shengwen Yang, Bing Ren, Xuhui Zhou, Liping Liu
2018 J jnl
Finding a Needle in the Haystack: Attention-Based Classification of High Resolution Microscopy Images.
CoRR
Naofumi Tomita, Behnaz Abdollahi, Jason Wei, Bing Ren, Arief A. Suriawinata, Saeed Hassanpour
2017 J jnl
HUGIn: Hi-C Unifying Genomic Interrogator.
Bioinform.
Joshua S. Martin, Zheng Xu, Alex P. Reiner, Karen L. Mohlke, Patrick F. Sullivan, Bing Ren, Ming Hu, Yun Li
2015 Misc conf
3D chromosome rendering from Hi-C data using virtual reality.
Visualization and Data Analysis
Yixin Zhu, Siddarth Selvaraj, Philip P. Weber, Jennifer Fang, Jürgen P. Schulze, Bing Ren
2015 J jnl
Chromatin architecture reorganization during stem cell differentiation Open.
Nat.
Jesse R. Dixon, Inkyung Jung, Siddarth Selvaraj, Yin Shen, Jessica E. Antosiewicz-Bourget, Ahyoung Lee, Zhen Ye, Audrey Kim, Nisha Rajagopal, Wei Xie, Yarui Diao, Jing Liang, Huimin Zhao, Victor V. Lobanenkov, Joseph R. Ecker, James A. Thomson, Bing Ren
2015 J jnl
Integrative analysis of 111 reference human epigenomes Open.
Nat.
Roadmap Epigenomics Consortium, Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi Moussavi, Pouya Kheradpour, ZhiZhuo Zhang, Jianrong Wang, Michael J. Ziller, Viren Amin, John W. Whitaker, Matthew D. Schultz, Lucas D. Ward, Abhishek Sarkar, Gerald T. Quon, Richard S. Sandstrom, Matthew L. Eaton, Yi-Chieh Wu, Andreas R. Pfenning, Xinchen Wang, Melina Claussnitzer, Yaping Liu, Cristian Coarfa, R. Alan Harris, Noam Shoresh, Charles B. Epstein, Elizabeta Gjoneska, Danny Leung, Wei Xie, R. David Hawkins, Ryan Lister, Chibo Hong, Philippe Gascard, Andrew J. Mungall, Richard A. Moore, Eric Chuah, Angela Tam, Theresa K. Canfield, R. Scott Hansen, Rajinder Kaul, Peter J. Sabo, Mukul S. Bansal, Annaick Carles, Jesse R. Dixon, Kyle Kai-How Farh, Soheil Feizi, Rosa Karlic, Ah-Ram Kim, Ashwinikumar Kulkarni, Daofeng Li, Rebecca F. Lowdon, GiNell Elliott, Tim R. Mercer, Shane J. Neph, Vitor Onuchic, Paz Polak, Nisha Rajagopal, Pradipta Ray, Richard C. Sallari, Kyle T. Siebenthall, Nicholas A. Sinnott-Armstrong, Michael Stevens, Robert E. Thurman, Jie Wu, Bo Zhang, Xin Zhou, Arthur E. Beaudet, Laurie A. Boyer, Philip L. De Jager, Peggy J. Farnham, Susan J. Fisher, David Haussler, Steven J. M. Jones, Wei Li, Marco A. Marra, Michael T. McManus, Shamil R. Sunyaev, James A. Thomson, Thea D. Tlsty, Li-Huei Tsai, Wei Wang, Robert A. Waterland, Michael Q. Zhang, Lisa H. Chadwick, Bradley E. Bernstein, Joseph F. Costello, Joseph R. Ecker, Martin Hirst, Alexander Meissner, Aleksandar Milosavljevic, Bing Ren, John A. Stamatoyannopoulos, Ting Wang, Manolis Kellis
2014 J jnl
Topologically associating domains are stable units of replication-timing regulation Open.
Nat.
Benjamin D. Pope, Tyrone Ryba, Vishnu Dileep, Feng Yue, Wei-Sheng Wu, Olgert Denas, Daniel L. Vera, Yanli Wang, R. Scott Hansen, Theresa K. Canfield, Robert E. Thurman, Yong Cheng, Günhan Gülsoy, Jonathan H. Dennis, Michael P. Snyder, John A. Stamatoyannopoulos, James Taylor, Ross C. Hardison, Tamer Kahveci, Bing Ren, David M. Gilbert
2013 J jnl
A high-resolution map of the three-dimensional chromatin interactome in human cells.
Nat.
Fulai Jin, Yan Li, Jesse R. Dixon, Siddarth Selvaraj, Zhen Ye, Ahyoung Lee, Chia-An Yen, Anthony D. Schmitt, Celso A. Espinoza, Bing Ren
2013 J jnl
Bayesian Inference of Spatial Organizations of Chromosomes.
PLoS Comput. Biol.
Ming Hu, Ke Deng, Zhaohui S. Qin, Jesse R. Dixon, Siddarth Selvaraj, Jennifer Fang, Bing Ren, Jun S. Liu
2013 J jnl
RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State.
PLoS Comput. Biol.
Nisha Rajagopal, Wei Xie, Yan Li, Uli Wagner, Wei Wang, John A. Stamatoyannopoulos, Jason Ernst, Manolis Kellis, Bing Ren
2013 J jnl
STAR: an integrated solution to management and visualization of sequencing data.
Bioinform.
Tao Wang, Jie Liu, Li Shen, Julian Tonti-Filippini, Yun Zhu, Haiyang Jia, Ryan Lister, John W. Whitaker, Joseph R. Ecker, A. Harvey Millar, Bing Ren, Wei Wang
2012 J jnl
HiCNorm: removing biases in Hi-C data via Poisson regression.
Bioinform.
Ming Hu, Ke Deng, Siddarth Selvaraj, Zhaohui S. Qin, Bing Ren, Jun S. Liu
2009 J jnl
Discovery and Annotation of Functional Chromatin Signatures in the Human Genome.
PLoS Comput. Biol.
Gary Chung Hon, Wei Wang, Bing Ren
2008 J jnl
ChromaSig: A Probabilistic Approach to Finding Common Chromatin Signatures in the Human Genome.
PLoS Comput. Biol.
Gary Chung Hon, Bing Ren, Wei Wang
2008 J jnl
Prediction of regulatory elements in mammalian genomes using chromatin signatures.
BMC Bioinform.
Kyoung-Jae Won, Iouri Chepelev, Bing Ren, Wei Wang
2004 — conf
Application of Neural Network on Wave Impact Force Prediction.
ISNN (2)
Hongyu Zhang, Yongxue Wang, Bing Ren
2002 J jnl
Testing Homogeneous Spreadsheet Grids with the "What You See Is What You Test" Methodology.
IEEE Trans. Software Eng.
Margaret M. Burnett, Andrei Sheretov, Bing Ren, Gregg Rothermel
2001 — conf
Visually Testing Recursive Programs in Spreadsheet Languages.
HCC
Margaret M. Burnett, Bing Ren, Amy J. Ko, Curtis R. Cook, Gregg Rothermel