Bhyravabhotla Jayaram

12 papers Journal 10Unranked 2

Year	Rank	Type	Title / Venue / Authors
2020	J	`jnl`	Improving the binding affinity estimations of protein-ligand complexes using machine-learning facilitated force field method. J. Comput. Aided Mol. Des. Anjali Soni, Ruchika Bhat, Bhyravabhotla Jayaram
2017	J	`jnl`	A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics. Bioinform. Anjali Soni, Pooja Khurana, Tanya Singh, Bhyravabhotla Jayaram
2017	J	`jnl`	A component analysis of the free energies of folding of 35 proteins: A consensus view on the thermodynamics of folding at the molecular level. J. Comput. Chem. Debarati DasGupta, Varun Mandalaparthy, Bhyravabhotla Jayaram
2015	J	`jnl`	Rapid computation and interpretation of Boolean attractors in biological networks. J. Complex Networks Suhas V. Vasaikar, Bhyravabhotla Jayaram, James Gomes
2014	J	`jnl`	Bhageerath-H: A homology/ab initio hybrid server for predicting tertiary structures of monomeric soluble proteins. BMC Bioinform. Bhyravabhotla Jayaram, Priyanka Dhingra, Avinash Mishra, Rahul Kaushik, Goutam Mukherjee, Ankita Singh, Shashank Shekhar
2013	J	`jnl`	A homology/ J. Comput. Chem. Priyanka Dhingra, Bhyravabhotla Jayaram
2013	J	`jnl`	ANGDelMut - a web-based tool for predicting and analyzing functional loss mechanisms of deleterious angiogenin mutations causing amyotrophic lateral sclerosis. F1000Research Aditya K. Padhi, Suhas V. Vasaikar, Bhyravabhotla Jayaram, James Gomes
2012	J	`jnl`	Sanjeevini: a freely accessible web-server for target directed lead molecule discovery. BMC Bioinform. Bhyravabhotla Jayaram, Tanya Singh, Goutam Mukherjee, Abhinav Mathur, Shashank Shekhar, Vandana Shekhar
2011	J	`jnl`	A fast empirical GAFF compatible partial atomic charge assignment scheme for modeling interactions of small molecules with biomolecular targets. J. Comput. Chem. Goutam Mukherjee, Niladri Patra, Poranjyoti Barua, Bhyravabhotla Jayaram
2010	—	`conf`	Bhageerath: A Web Enabled High Performance Computing (HPC) Software Suite for Predicting The Tertiary Structures of Small Globular Proteins Using all Atom Energy Based Ab initio Methods. BIOCOMP Shashank Shekhar, Priyanka Dhingra, Bharat Lakhani, Avinash Mishra, Bhyravabhotla Jayaram
2006	J	`jnl`	A Physicochemical Model for Analyzing DNA Sequences. J. Chem. Inf. Model. Samrat Dutta, Poonam Singhal, Praveen Agrawal, Raju Tomer, Kritee, Ekta Khurana, Bhyravabhotla Jayaram
2006	—	`conf`	From Gene to Drug: A Proof of Concept for a Plausible Computational Pathway. ISDA (1) Sandhya Shenoy, Bhyravabhotla Jayaram, N. Latha, Pooja Narang, Tarun Jain, Kumkum Bhushan, Saher Afshan Shaikh, Surojit Bose, Pankaj Sharma, Poonam Singhal, A. Gandhimathi, Praveen Agrawal, Vidhu Pandey, Samrat Dutta, Gurvisha Sandhu, Anuj Gupta, Shashank Shekhar, Shailesh Tripathi