Bharath Dandala

21 papers B 1Misc 6Journal 6Unranked 7

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects. CoRR Hongyang Li, Sanjoy Dey, Bum Chul Kwon, Michael M. Danziger, Michal Rosen-Tzvi, Jianying Hu, James Kozloski, Ching-Huei Tsou, Bharath Dandala, Pablo Meyer
2025	J	`jnl`	BMFM-RNA: An Open Framework for Building and Evaluating Transcriptomic Foundation Models. CoRR Bharath Dandala, Michael M. Danziger, Ella Barkan, Tanwi Biswas, Viatcheslav Gurev, Jianying Hu, Matthew Madgwick, Akira Koseki, Tal Kozlovski, Michal Rosen-Zvi, Yishai Shimoni, Ching-Huei Tsou
2024	—	`conf`	INDUS: Effective and Efficient Language Models for Scientific Applications. EMNLP (Industry Track) Bishwaranjan Bhattacharjee, Aashka Trivedi, Masayasu Muraoka, Muthukumaran Ramasubramanian, Takuma Udagawa, Iksha Gurung, Nishan Pantha, Rong Zhang, Bharath Dandala, Rahul Ramachandran, Manil Maskey, Kaylin M. Bugbee, Michael Little, Elizabeth Fancher, Irina Gerasimov, Armin Mehrabian, Lauren M. Sanders, Sylvain Costes, Sergi Blanco-Cuaresma, Kelly E. Lockhart, Thomas Allen, Félix Grèzes, Megan Ansdell, Alberto Accomazzi, Yousef El-Kurdi, Davis Wertheimer, Birgit Pfitzmann, Cesar Berrospi Ramis, Michele Dolfi, Rafael Teixeira de Lima, Panagiotis Vagenas, S. Karthik Mukkavilli, Peter W. J. Staar, Sanaz Vahidinia, Ryan McGranaghan, Tsengdar J. Lee
2024	J	`jnl`	INDUS: Effective and Efficient Language Models for Scientific Applications. CoRR Bishwaranjan Bhattacharjee, Aashka Trivedi, Masayasu Muraoka, Muthukumaran Ramasubramanian, Takuma Udagawa, Iksha Gurung, Rong Zhang, Bharath Dandala, Rahul Ramachandran, Manil Maskey, Kaylin M. Bugbee, Mike Little, Elizabeth Fancher, Lauren M. Sanders, Sylvain V. Costes, Sergi Blanco-Cuaresma, Kelly E. Lockhart, Thomas Allen, Félix Grèzes, Megan Ansdell, Alberto Accomazzi, Yousef El-Kurdi, Davis Wertheimer, Birgit Pfitzmann, Cesar Berrospi Ramis, Michele Dolfi, Rafael Teixeira de Lima, Panagiotis Vagenas, S. Karthik Mukkavilli, Peter W. J. Staar, Sanaz Vahidinia, Ryan McGranaghan, Armin Mehrabian, Tsengdar J. Lee
2022	Misc	`conf`	Hierarchy-aware Adverse Reaction Embeddings for Signal Detection. AMIA Venkata Joopudi, Bharath Dandala, Ching-Huei Tsou, Jennifer J. Liang
2021	Misc	`conf`	Exploring Effectiveness of Domain and Task-Adaptive Pretraining for Clinical Information Extraction. AMIA Venkata Joopudi, Ananya Poddar, Bharath Dandala, Ching-Huei Tsou
2021	—	`conf`	IBM @ TREC Clinical Trials Track 2021. TREC Laura Biester, Venkata Joopudi, Bharath Dandala
2021	Misc	`conf`	Leveraging Transformer-based Sequential Sentence Models for Clinical Information Extraction. AMIA Ananya Poddar, Venkata Joopudi, Bharath Dandala, Ching-Huei Tsou
2021	Misc	`conf`	Reducing Physicians' Cognitive Load During Chart Review: A Problem-Oriented Summary of the Patient Electronic Record. AMIA Jennifer J. Liang, Ching-Huei Tsou, Bharath Dandala, Ananya Poddar, Venkata Joopudi, Diwakar Mahajan, John M. Prager, Preethi Raghavan, Michele Payne
2020	Misc	`conf`	Joint Modelling of Entities and Relations for Adverse Drug Event Extraction using Knowledge-aware Neural Attentive Deep Learning Models. AMIA Bharath Dandala, Venkata Joopudi, Ching-Huei Tsou, Jennifer J. Liang, Parthasarathy Suryanarayanan
2020	J	`jnl`	WNTRAC: Artificial Intelligence Assisted Tracking of Non-pharmaceutical Interventions Implemented Worldwide for COVID-19. CoRR Parthasarathy Suryanarayanan, Ching-Huei Tsou, Ananya Poddar, Diwakar Mahajan, Bharath Dandala, Piyush Madan, Anshul Agrawal, Charles Wachira, Samuel Mogaka Osebe, Osnat Bar-Shira, Clifton Kipchirchir, Sharon Okwako, William Ogallo, Fred Otieno, Timothy Nyota, Fiona Matu, Vesna Resende Barros, Daniel Shats, Oren Kagan, Sekou L. Remy, Oliver Bent, Shilpa Mahatma, Aisha Walcott-Bryant, Divya Pathak, Michal Rosen-Zvi
2019	J	`jnl`	Training Models to Extract Treatment Plans from Clinical Notes Using Contents of Sections with Headings. CoRR Ananya Poddar, Bharath Dandala, Murthy V. Devarakonda
2018	J	`jnl`	A convolutional route to abbreviation disambiguation in clinical text. J. Biomed. Informatics Venkata Joopudi, Bharath Dandala, Murthy V. Devarakonda
2018	—	`conf`	IBM Research System at MADE 2018: Detecting Adverse Drug Events from Electronic Health Records. Medication and Adverse Drug Event Detection Bharath Dandala, Venkata Joopudi, Murthy V. Devarakonda
2018	—	`conf`	IBM Research System at TAC 2018: Deep Learning architectures for Drug-Drug Interaction extraction from Structured Product Labels. TAC Bharath Dandala, Diwakar Mahajan, Ananya Poddar
2017	—	`conf`	IBM Research System at TAC 2017: Adverse Drug Reactions Extraction from Drug Labels. TAC Bharath Dandala, Diwakar Mahajan, Murthy V. Devarakonda
2016	—	`conf`	Scoring Disease-Medication Associations using Advanced NLP, Machine Learning, and Multiple Content Sources. BioTxtM@COLING 2016 Bharath Dandala, Murthy V. Devarakonda, Mihaela A. Bornea, Christopher Nielson
2013	B	`conf`	Multilingual Word Sense Disambiguation Using Wikipedia. IJCNLP Bharath Dandala, Rada Mihalcea, Razvan C. Bunescu
2013	Misc	`conf`	Sense Clustering Using Wikipedia. RANLP Bharath Dandala, Chris Hokamp, Rada Mihalcea, Razvan C. Bunescu
2013	—	`ch.`	Word Sense Disambiguation Using Wikipedia. The People's Web Meets NLP Bharath Dandala, Rada Mihalcea, Razvan C. Bunescu
2012	—	`conf`	Towards Building a Multilingual Semantic Network: Identifying Interlingual Links in Wikipedia. *SEM@NAACL-HLT Bharath Dandala, Rada Mihalcea, Razvan C. Bunescu