Bette T. Korber

18 papers Journal 17Unranked 1
YearRankTypeTitle / Venue / Authors
2016 J jnl
Effect of Glycosylation on an Immunodominant Region in the V1V2 Variable Domain of the HIV-1 Envelope gp120 Protein.
PLoS Comput. Biol.
Jianhui Tian, Cesar A. López, Cynthia A. Derdeyn, Morris S. Jones, Abraham Pinter, Bette T. Korber, S. Gnanakaran
2016 J jnl
Integrated sequence and immunology filovirus database at Los Alamos.
Database J. Biol. Databases Curation
Karina Yusim, Hyejin Yoon, Brian T. Foley, Shihai Feng, Jennifer Macke, Mira Dimitrijevic, Werner Abfalterer, James Szinger, Will Fischer, Carla Kuiken, Bette T. Korber
2015 J jnl
CATNAP: a tool to compile, analyze and tally neutralizing antibody panels.
Nucleic Acids Res.
Hyejin Yoon, Jennifer Macke, Anthony P. West Jr., Brian T. Foley, Pamela J. Bjorkman, Bette T. Korber, Karina Yusim
2013 J jnl
A Mechanistic Understanding of Allosteric Immune Escape Pathways in the HIV-1 Envelope Glycoprotein.
PLoS Comput. Biol.
Anurag Sethi, Jianhui Tian, Cynthia A. Derdeyn, Bette T. Korber, S. Gnanakaran
2013 J jnl
A multiple-alignment based primer design algorithm for genetically highly variable DNA targets.
BMC Bioinform.
Johanna Brodin, Mohan Krishnamoorthy, Gayathri Athreya, Will Fischer, Peter T. Hraber, Cheryl Gleasner, Lance Green, Bette T. Korber, Thomas Leitner
2010 J jnl
Estimating time since infection in early homogeneous HIV-1 samples using a poisson model.
BMC Bioinform.
Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya
2010 J jnl
Genetic Signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies.
PLoS Comput. Biol.
S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F. Haynes, Myron S. Cohen, George M. Shaw, Michael S. Seaman, Amit Kumar, Feng Gao, David C. Montefiori, Bette T. Korber
2010 J jnl
HIV classification using the coalescent theory.
Bioinform.
Ingo Bulla, Anne-Kathrin Schultz, Fabian Schreiber, Ming Zhang, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
2009 J jnl
jpHMM: Improving the reliability of recombination prediction in HIV-1.
Nucleic Acids Res.
Anne-Kathrin Schultz, Ming Zhang, Ingo Bulla, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
2008 J jnl
Coping with Viral Diversity in HIV Vaccine Design: A Response to Nickle et al.
PLoS Comput. Biol.
Will Fischer, H. X. Liao, Barton F. Haynes, Norman L. Letvin, Bette T. Korber
2008 J jnl
Web-based design and evaluation of T-cell vaccine candidates.
Bioinform.
James Thurmond, Hyejin Yoon, Carla Kuiken, Karina Yusim, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Bette T. Korber, Will Fischer
2006 J jnl
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes.
BMC Bioinform.
Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, Carla Kuiken, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
2006 — conf
HLA and HIV Infection Progression: Application of the Minimum Description Length Principle to Statistical Genetics.
ISBMDA
Peter T. Hraber, Bette T. Korber, Steven Wolinsky, Henry A. Erlich, Elizabeth A. Trachtenberg, Thomas B. Kepler
2006 J jnl
Immunoinformatics Comes of Age.
PLoS Comput. Biol.
Bette T. Korber, Montiago LaBute, Karina Yusim
2006 J jnl
jpHMM at GOBICS: a web server to detect genomic recombinations in HIV-1.
Nucleic Acids Res.
Ming Zhang, Anne-Kathrin Schultz, Charles Calef, Carla Kuiken, Thomas Leitner, Bette T. Korber, Burkhard Morgenstern, Mario Stanke
2005 J jnl
HLA and HIV Infection Progression: Application of the Minimum Description Length Principle to Statistical Genetics
CoRR
Peter T. Hraber, Bette T. Korber, Steven Wolinsky, Henry A. Erlich, Elizabeth A. Trachtenberg, Thomas B. Kepler
2001 J jnl
Retrieval and on-the-fly alignment of sequence fragments from the HIV database.
Bioinform.
Brian Gaschen, Carla Kuiken, Bette T. Korber, Brian T. Foley
2000 J jnl
Detecting hypermutations in viral sequences with an emphasis on G A hypermutation.
Bioinform.
Patrick P. Rose, Bette T. Korber