Bernie J. Daigle Jr.

15 papers A* 1Journal 14
YearRankTypeTitle / Venue / Authors
2021 J jnl
GEOlimma: differential expression analysis and feature selection using pre-existing microarray data.
BMC Bioinform.
Liangqun Lu, Kevin A. Townsend, Bernie J. Daigle Jr.
2019 J jnl
icHET: interactive visualization of cytoplasmic heteroplasmy.
Bioinform.
Vinhthuy Phan, Diem-Trang Pham, Caroline Melton, Adam J. Ramsey, Bernie J. Daigle Jr., Jennifer R. Mandel
2017 J jnl
Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017.
BMC Bioinform.
Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai
2016 J jnl
Identification of disease states associated with coagulopathy in trauma.
BMC Medical Informatics Decis. Mak.
Yuanyang Zhang, Tie Bo Wu, Bernie J. Daigle Jr., Mitchell J. Cohen, Linda R. Petzold
2016 J jnl
Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016.
BMC Bioinform.
Eric C. Rouchka, Julia H. Chariker, Benjamin J. Harrison, Juw Won Park, Xueyuan Cao, Stanley Pounds, Susana C. Raimondi, James R. Downing, Raul C. Ribeiro, Jeffrey Rubnitz, Jatinder Lamba, Bernie J. Daigle Jr., Deborah Burgess, Stephanie Gehrlich, John C. Carmen, Nicholas Johnson, Chandrakanth Emani, Kalpani De Silva, Michael P. Heaton, Theodore S. Kalbfleisch, Teeradache Viangteeravat, Rahul Mudunuri, Oluwaseun Ajayi, Fatih Sen, Eunice Y. Huang, Mohammad Mohebbi, Luaire Florian, Douglas J. Jackson, John F. Naber, Akm Sabbir, Sally R. Ellingson, Yuping Lu, Charles A. Phillips, Michael A. Langston, Rahul Kumar Sevakula, Raghuveer Thirukovalluru, Nishchal K. Verma, Yan Cui, Mohammed Sayed, Jing Wang, Qi Liu, Yu Shyr, Xiaofei Zhang, Naresh Prodduturi, Gavin R. Oliver, Diane Grill, Jie Na, Jeanette Eckel-Passow, Eric W. Klee, Michael M. Goodin, Mark L. Farman, Harrison Inocencio, Chanyong Jang, Jerzy W. Jaromczyk, Neil Moore, Kelly L. Sovacool, Leon Dent, Mike Izban, Sammed N. Mandape, Shruti S. Sakhare, Siddharth Pratap, Dana Marshall, M. Scotty Depriest, James N. MacLeod, Hanady Adam, Ethan Blandford, Joel Campbell, Joshua Castlen, Brittany Dixon, Ginger Gilbert, Aaron Hall, Philip Kreisle, Jessica Lasher, Bethany Oakes, Allison Speer, Maximilian Valentine, Naga Satya Venkateswara Ra Nagisetty, Rony Jose, Robert W. Rooney, David Hains
2016 J jnl
SParSE++: improved event-based stochastic parameter search.
BMC Syst. Biol.
Min K. Roh, Bernie J. Daigle Jr.
2016 J jnl
Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist.
PLoS Comput. Biol.
Brian Drawert, Andreas Hellander, Benjamin B. Bales, Debjani Banerjee, Giovanni Bellesia, Bernie J. Daigle Jr., Geoffrey Douglas, Mengyuan Gu, Anand Gupta, Stefan Hellander, Christopher B. Horuk, Dibyendu Nath, Aviral Takkar, Sheng Wu, Per Lötstedt, Chandra Krintz, Linda R. Petzold
2015 A* conf
A Cure Time Model for Joint Prediction of Outcome and Time-to-Outcome.
ICDM
Yuanyang Zhang, Bernie J. Daigle Jr., Mitchell J. Cohen, Linda R. Petzold
2015 J jnl
Inferring single-cell gene expression mechanisms using stochastic simulation.
Bioinform.
Bernie J. Daigle Jr., Mohammad Soltani, Linda R. Petzold, Abhyudai Singh
2013 J jnl
Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder.
BMC Syst. Biol.
Ruoting Yang, Bernie J. Daigle Jr., Seid Y. Muhie, Rasha Hammamieh, Marti Jett, Linda R. Petzold, Francis J. Doyle III
2012 J jnl
Accelerated maximum likelihood parameter estimation for stochastic biochemical systems.
BMC Bioinform.
Bernie J. Daigle Jr., Min K. Roh, Linda R. Petzold, Jarad Niemi
2012 J jnl
Core module biomarker identification with network exploration for breast cancer metastasis.
BMC Bioinform.
Ruoting Yang, Bernie J. Daigle Jr., Linda R. Petzold, Francis J. Doyle III
2010 J jnl
Independent component analysis: Mining microarray data for fundamental human gene expression modules.
J. Biomed. Informatics
Jesse M. Engreitz, Bernie J. Daigle Jr., Jonathan J. Marshall, Russ B. Altman
2010 J jnl
Using Pre-existing Microarray Datasets to Increase Experimental Power: Application to Insulin Resistance.
PLoS Comput. Biol.
Bernie J. Daigle Jr., Alicia Deng, Tracey McLaughlin, Samuel W. Cushman, Margaret C. Cam, Gerald Reaven, Philip S. Tsao, Russ B. Altman
2008 J jnl
M-BISON: Microarray-based integration of data sources using networks.
BMC Bioinform.
Bernie J. Daigle Jr., Russ B. Altman