Benjamin Goudey

17 papers Misc 3Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
A survey on deep learning for polygenic risk scores.
Briefings Bioinform.
Max Schuran, Benjamin Goudey, Gillian S. Dite, Enes Makalic
2024 J jnl
Integration of background knowledge for automatic detection of inconsistencies in gene ontology annotation.
Bioinform.
Jiyu Chen, Benjamin Goudey, Nicholas Geard, Karin Verspoor
2023 J jnl
Disease progression modelling of Alzheimer's disease using probabilistic principal components analysis.
NeuroImage
Martin Saint-Jalmes, Victor Fedyashov, Daniel Beck, Timothy Baldwin, Noel G. Faux, Pierrick Bourgeat, Jurgen Fripp, Colin L. Masters, Benjamin Goudey
2022 J jnl
Exploring automatic inconsistency detection for literature-based gene ontology annotation.
Bioinform.
Jiyu Chen, Benjamin Goudey, Justin Zobel, Nicholas Geard, Karin Verspoor
2022 J jnl
Propagation, detection and correction of errors using the sequence database network.
Briefings Bioinform.
Benjamin Goudey, Nicholas Geard, Karin Verspoor, Justin Zobel
2021 J jnl
Evaluation of consensus strategies for haplotype phasing.
Briefings Bioinform.
Ziad Al Bkhetan, Gursharan Chana, Kotagiri Ramamohanarao, Karin Verspoor, Benjamin Goudey
2021 J jnl
eQTLHap: a tool for comprehensive eQTL analysis considering haplotypic and genotypic effects.
Briefings Bioinform.
Ziad Al Bkhetan, Gursharan Chana, Cheng Soon Ong, Benjamin Goudey, Kotagiri Ramamohanarao
2019 J jnl
Exploring effective approaches for haplotype block phasing.
BMC Bioinform.
Ziad Al Bkhetan, Justin Zobel, Adam Kowalczyk, Karin Verspoor, Benjamin Goudey
2018 Misc conf
A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature.
AMIA
Antonio Jimeno-Yepes, Andrew D. MacKinlay, Natalie Gunn, Christine Schieber, Noel Faux, Matthew Downton, Benjamin Goudey, Richard L. Martin
2018 Misc conf
Predicting the Key Alzheimers Biomarkers in CSF from Plasma Analytes.
AMIA
Christine Schieber, Annalisa Swan, Roslyn I. Hickson, Noel Faux, Benjamin Goudey
2017 J jnl
A framework for optimal health worker allocation in under-resourced regions.
IBM J. Res. Dev.
Benjamin Goudey, Roslyn I. Hickson, C. K. H. Hettiarachchige, M. Pore, C. Reeves, O. J. Smith, Annalisa Swan
2016 J jnl
Information theoretic alignment free variant calling.
PeerJ Comput. Sci.
Justin Bedo, Benjamin Goudey, Jeremy Wazny, Ze-yu Zhou
2016 J jnl
Information theoretic alignment free variant calling.
PeerJ Prepr.
Justin Bedo, Benjamin Goudey, Jeremy Wazny, Ze-yu Zhou
2015 J jnl
High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies.
Health Inf. Sci. Syst.
Benjamin Goudey, Mani Abedini, John L. Hopper, Michael Inouye, Enes Makalic, Daniel F. Schmidt, John Wagner, Zeyu Zhou, Justin Zobel, Matthias Reumann
2014 — conf
GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes.
BIBM
Qiao Wang, Fan Shi, Andrew Kowalczyk, Richard M. Campbell, Benjamin Goudey, Dave Rawlinson, Aaron Harwood, Herman L. Ferrá, Adam Kowalczyk
2011 J jnl
Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm.
BMC Bioinform.
Benjamin Goudey, Qiao Wang, Dave Rawlinson, Armita Zarnegar, Eder Kikianty, John Markham, Geoff MacIntyre, Gad Abraham, Linda Stern, Michael Inouye, Izhak Haviv, Adam Kowalczyk
2007 Misc conf
Exploring Extensions to Machine-learning based Gene Normalisation.
ALTA
Benjamin Goudey, Nicola Stokes, David Martínez