Ben Cao

22 papers A* 1Journal 16Unranked 5
YearRankTypeTitle / Venue / Authors
2026 J jnl
An end-to-end DNA storage coding method based on a low-complexity multiple biological constraints loss and RL-inspired differentiable solver.
Expert Syst. Appl.
Xiang Liu, Yanfen Zheng, Xue Li, Bin Wang, Shihua Zhou, Ben Cao, Pan Zheng
2026 J jnl
DNACSE: Enhancing Genomic LLMs with Contrastive Learning for DNA Barcode Identification.
J. Chem. Inf. Model.
Jiadong Wang, Bin Wang, Shihua Zhou, Ben Cao, Wei Li, Pan Zheng
2026 J jnl
Integrating histology and spatial transcriptomics via multimodal transformers and contrastive representation learning for accurate gene expression prediction.
J. Biomed. Informatics
Kai Wang, Liuming Shi, Xue Li, Wei Li, Bin Wang, Shihua Zhou, Ben Cao, Pan Zheng
2026 A* conf
Learning Structurally Stabilized Representations for Lossless DNA Storage.
AAAI
Ben Cao, Xue Li, Tiantian He, Bin Wang, Shihua Zhou, Xiaohu Wu, Qiang Zhang
2025 J jnl
Achieving handle-level random access in an encrypted DNA archival storage system via frequency dictionary mapping coding.
Patterns
Ben Cao, Xue Li, Bin Wang, Tiantian He, Yanfen Zheng, Xiaokang Zhang, Qiang Zhang
2025 — conf
DNA Sequence Clustering in High Error Rates via Hash Sketches Fuzzy Clustering for Efficient Stored Data Reconstruction.
PAKDD (3)
Qi Shao, Yanfen Zheng, Ben Cao, Zhenlu Liu, Bin Wang, Shihua Zhou, Pan Zheng
2025 — conf
Efficient DNA Fragment Assembly Based on Discrete Slime Mould Algorithm.
PAKDD (7)
Shuqing Si, Ben Cao, Qi Shao, Lijun Sun, Yanfen Zheng, Bin Wang, Pan Zheng
2025 J jnl
Predicting Mutation-Disease Associations Through Protein Interactions Via Deep Learning.
IEEE J. Biomed. Health Informatics
Xue Li, Ben Cao, Jianmin Wang, Xiangyu Meng, Shuang Wang, Yu Huang, Enrico Petretto, Tao Song
2024 J jnl
Learning Structurally Stabilized Representations for Multi-modal Lossless DNA Storage.
CoRR
Ben Cao, Tiantian He, Xue Li, Bin Wang, Xiaohu Wu, Qiang Zhang, Yew-Soon Ong
2024 — conf
MFN: Explainable DNA triple helixes Stabilized Design based on mCGR and flow network.
BIBM
Xiaoru Wen, Lijun Sun, Lei Xie, Yanfen Zheng, Ben Cao, Bin Wang
2024 J jnl
PELMI: Realize robust DNA image storage under general errors via parity encoding and local mean iteration.
Briefings Bioinform.
Ben Cao, Kun Wang, Lei Xie, Jianxia Zhang, Yunzhu Zhao, Bin Wang, Pan Zheng
2024 — conf
PepPFN: protein-peptide binding residues prediction via pre-trained module-based Fourier Network.
CAI
Xue Li, Ben Cao, Hongzhen Ding, Na Kang, Tao Song
2024 J jnl
Storing Images in DNA via base128 Encoding.
J. Chem. Inf. Model.
Kun Wang, Ben Cao, Tao Ma, Yunzhu Zhao, Yanfen Zheng, Bin Wang, Shihua Zhou, Qiang Zhang
2023 J jnl
A mutual embedded self-attention network model for code search.
J. Syst. Softw.
Haize Hu, Jianxun Liu, Xiangping Zhang, Ben Cao, Siqiang Cheng, Teng Long
2023 J jnl
Combining bidirectional long short-term memory and self-attention mechanism for code search.
Concurr. Comput. Pract. Exp.
Ben Cao, Jianxun Liu
2023 J jnl
DUHI: Dynamically updated hash index clustering method for DNA storage.
Comput. Biol. Medicine
Penghao Wang, Ben Cao, Tao Ma, Bin Wang, Qiang Zhang, Pan Zheng
2023 J jnl
High Net Information Density DNA Data Storage by the MOPE Encoding Algorithm.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yanfen Zheng, Ben Cao, Jieqiong Wu, Bin Wang, Qiang Zhang
2022 J jnl
Designing Uncorrelated Address Constrain for DNA Storage by DMVO Algorithm.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ben Cao, Xue Ii, Xiaokang Zhang, Bin Wang, Qiang Zhang, Xiaopeng Wei
2022 J jnl
FMG: An observable DNA storage coding method based on frequency matrix game graphs.
Comput. Biol. Medicine
Ben Cao, Peijun Shi, Yanfen Zheng, Qiang Zhang
2021 J jnl
Bifurcation and Chaos of Spontaneous Oscillations of Hair Bundles in Auditory Hair Cells.
Int. J. Bifurc. Chaos
Ben Cao, Huaguang Gu, Jiawei Bai, Fuqiang Wu
2020 J jnl
K-Means Multi-Verse Optimizer (KMVO) Algorithm to Construct DNA Storage Codes.
IEEE Access
Ben Cao, Sue Zhao, Xue Li, Bin Wang
2016 — conf
A stochastic alternating minimization approach for large scale Low Rank Matrix Factorization.
WCSP
Ben Cao, Qinzhen Xu, Wen Yan, Luxi Yang