Bas Teusink

17 papers Journal 16Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
A modular model integrating metabolism, growth, and cell cycle predicts that fermentation is required to modulate cell size in yeast populations.
PLoS Comput. Biol.
Marco Vanoni, Pasquale Palumbo, Federico Papa, Stefano Busti, Laura Gotti, Meike T. Wortel, Bas Teusink, Ivan Orlandi, Alex Pessina, Cristina Airoldi, Luca Brambilla, Marina Vai, Lilia Alberghina
2023 J jnl
Whole-cell metabolic control analysis.
Biosyst.
Frank J. Bruggeman, Maaike Remeijer, Maarten Droste, Luis Salinas, Meike T. Wortel, Robert Planqué, Herbert M. Sauro, Bas Teusink, Hans V. Westerhoff
2021 J jnl
Unlocking Elementary Conversion Modes: ecmtool Unveils All Capabilities of Metabolic Networks.
Patterns
Tom J. Clement, Erik B. Baalhuis, Bas Teusink, Frank J. Bruggeman, Robert Planqué, Daan H. de Groot
2020 J jnl
Elementary Growth Modes provide a molecular description of cellular self-fabrication.
PLoS Comput. Biol.
Daan H. de Groot, Josephus Hulshof, Bas Teusink, Frank J. Bruggeman, Robert Planqué
2019 J jnl
The number of active metabolic pathways is bounded by the number of cellular constraints at maximal metabolic rates.
PLoS Comput. Biol.
Daan H. de Groot, Coco van Boxtel, Robert Planqué, Frank J. Bruggeman, Bas Teusink
2018 J jnl
Dynamic elementary mode modelling of non-steady state flux data.
BMC Syst. Biol.
Abel Folch-Fortuny, Bas Teusink, Huub C. J. Hoefsloot, Age K. Smilde, Alberto Ferrer
2018 J jnl
Maintaining maximal metabolic flux by gene expression control.
PLoS Comput. Biol.
Robert Planqué, Josephus Hulshof, Bas Teusink, Johannes C. Hendriks, Frank J. Bruggeman
2018 J jnl
Training for translation between disciplines: a philosophy for life and data sciences curricula.
Bioinform.
K. Anton Feenstra, Sanne Abeln, Johan A. Westerhuis, Filipe Brancos dos Santos, Douwe Molenaar, Bas Teusink, Huub C. J. Hoefsloot, Jaap Heringa
2017 — conf
An Integrated Model Quantitatively Describing Metabolism, Growth and Cell Cycle in Budding Yeast.
WIVACE
Pasquale Palumbo, Marco Vanoni, Federico Papa, Stefano Busti, Meike T. Wortel, Bas Teusink, Lilia Alberghina
2016 J jnl
Modelling? Using Standards Can Help You.
ERCIM News
Brett G. Olivier, Bas Teusink
2015 J jnl
Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models.
PLoS Comput. Biol.
Timo R. Maarleveld, Meike T. Wortel, Brett G. Olivier, Bas Teusink, Frank J. Bruggeman
2013 J jnl
Bioinformatics and Systems Biology: bridging the gap between heterogeneous student backgrounds.
Briefings Bioinform.
Sanne Abeln, Douwe Molenaar, K. Anton Feenstra, Huub C. J. Hoefsloot, Bas Teusink, Jaap Heringa
2012 J jnl
FAME, the Flux Analysis and Modeling Environment.
BMC Syst. Biol.
Joost Boele, Brett G. Olivier, Bas Teusink
2011 J jnl
Predicting Metabolic Fluxes Using Gene Expression Differences As Constraints.
IEEE ACM Trans. Comput. Biol. Bioinform.
Rogier J. P. van Berlo, Dick de Ridder, Jean-Marc Daran, Pascale A. S. Daran-Lapujade, Bas Teusink, Marcel J. T. Reinders
2009 J jnl
Understanding the Adaptive Growth Strategy of
PLoS Comput. Biol.
Bas Teusink, Anne Wiersma, Leo Jacobs, Richard A. Notebaart, Eddy J. Smid
2008 J jnl
Co-Regulation of Metabolic Genes Is Better Explained by Flux Coupling Than by Network Distance.
PLoS Comput. Biol.
Richard A. Notebaart, Bas Teusink, Roland J. Siezen, Balázs Papp
2006 J jnl
Accelerating the reconstruction of genome-scale metabolic networks.
BMC Bioinform.
Richard A. Notebaart, Frank H. J. van Enckevort, Christof Francke, Roland J. Siezen, Bas Teusink