Barry Zeeberg

13 papers A 1B 1Misc 1Journal 9Unranked 1
YearRankTypeTitle / Venue / Authors
2011 J jnl
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis.
BMC Bioinform.
Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin Ehler, Vinodh N. Rajapakse, Robert F. Bonner, Jacob D. Brown, Brian P. Brooks, Vladimir L. Larionov, William C. Reinhold, John N. Weinstein, Yves Pommier
2010 — conf
Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model.
ISBRA
Martin Ehler, Vinodh N. Rajapakse, Barry Zeeberg, Brian P. Brooks, Jacob D. Brown, Wojciech Czaja, Robert F. Bonner
2010 J jnl
Ontogenomic study of the relationship between number of gene splice variants and GO categorization.
Bioinform.
Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein
2008 J jnl
SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi, microarray, and peptide-based studies.
BMC Bioinform.
Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen, James A. Cleland, Ari B. Kahn, Hongfang Liu, John N. Weinstein
2008 J jnl
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays.
BMC Bioinform.
Hans A. Kestler, André Müller, Johann M. Kraus, Malte Buchholz, Thomas M. Gress, Hongfang Liu, David W. Kane, Barry Zeeberg, John N. Weinstein
2007 J jnl
AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets.
Bioinform.
Hongfang Liu, Barry Zeeberg, Gang Qu, Akif Günes Koru, Alessandro Ferrucci, Ari B. Kahn, Michael C. Ryan, Antej Nuhanovic, Peter J. Munson, William C. Reinhold, David W. Kane, John N. Weinstein
2007 J jnl
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis.
BMC Bioinform.
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry Zeeberg, D. Curtis Jamison, John N. Weinstein
2005 J jnl
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID).
BMC Bioinform.
Barry Zeeberg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine, Hong Cao, David W. Kane, Mark Reimers, Robert M. Stephens, David Bryant, Stanley K. Burt, Eldad Elnekave, Danielle M. Hari, Thomas A. Wynn, Charlotte Cunningham-Rundles, Donn M. Stewart, David Nelson, John N. Weinstein
2004 J jnl
Mistaken Identifiers: Gene name errors can be introduced inadvertently when using Excel in bioinformatics.
BMC Bioinform.
Barry Zeeberg, Joseph Riss, David W. Kane, Kimberly J. Bussey, Edward Uchio, W. Marston Linehan, J. Carl Barrett, John N. Weinstein
2003 Misc conf
Development of Gene Ontology Tool for Biological Interpretation of Genomic and Proteomic Data.
AMIA
Weimin Feng, Geoffrey Wang, Barry Zeeberg, Kejiao Guo, Anthony T. Fojo, David W. Kane, William C. Reinhold, Samir Lababidi, John N. Weinstein, May D. Wang
1998 B conf
Metabolic Pathway Interface to Molecular Biology Databases.
SSDBM
Barry Zeeberg, Kevin Watanabe, Susumu Goto, Ross A. Overbeek, Larry Kerschberg, George Michaels
1997 A conf
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage.
ISMB
Lawrence Hunter, Barry Zeeberg
1995 J jnl
Theoretical relationships of receptor and delivery sensitivities and measurable parameters in in vivo neuroreceptor-radioligand interactions.
IEEE Trans. Medical Imaging
Barry Zeeberg