Badri Adhikari

20 papers C 1Journal 17Unranked 2
YearRankTypeTitle / Venue / Authors
2025 — conf
Teaching Coding in the Age of AI: A Hands-on Tutorial on Process Feedback.
SIGCSE (2)
Badri Adhikari, Jie Hou
2024 C conf
Maximizing Student Engagement in Coding Education with Explanatory AI.
FIE
Badri Adhikari, Sameep Dhakal, Aadya Jha
2023 J jnl
Adversarial sample generation and training using geometric masks for accurate and resilient license plate character recognition.
CoRR
Bishal Shrestha, Griwan Khakurel, Kritika Simkhada, Badri Adhikari
2023 J jnl
Thinking beyond chatbots' threat to education: Visualizations to elucidate the writing and coding process.
CoRR
Badri Adhikari
2022 J jnl
New Labeling Methods for Deep Learning Real-Valued Inter-Residue Distance Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jacob Barger, Badri Adhikari
2022 J jnl
Scoring protein sequence alignments using deep learning.
Bioinform.
Bikash Shrestha, Badri Adhikari
2021 J jnl
DISTEVAL: a web server for evaluating predicted protein distances.
BMC Bioinform.
Badri Adhikari, Bikash Shrestha, Matthew Bernardini, Jie Hou, Jamie Lea
2020 J jnl
Analysis of several key factors influencing deep learning-based inter-residue contact prediction.
Bioinform.
Tianqi Wu, Jie Hou, Badri Adhikari, Jianlin Cheng
2020 J jnl
DEEPCON: protein contact prediction using dilated convolutional neural networks with dropout.
Bioinform.
Badri Adhikari
2018 J jnl
CONFOLD2: improved contact-driven ab initio protein structure modeling.
BMC Bioinform.
Badri Adhikari, Jianlin Cheng
2018 J jnl
DNCON2: improved protein contact prediction using two-level deep convolutional neural networks.
Bioinform.
Badri Adhikari, Jie Hou, Jianlin Cheng
2018 — conf
DeepSF: Deep Convolutional Neural Network for Mapping Protein Sequences to Folds.
BCB
Jie Hou, Badri Adhikari, Jianlin Cheng
2018 J jnl
DeepSF: deep convolutional neural network for mapping protein sequences to folds.
Bioinform.
Jie Hou, Badri Adhikari, Jianlin Cheng
2017 J jnl
Deep learning methods for protein torsion angle prediction.
BMC Bioinform.
Haiou Li, Jie Hou, Badri Adhikari, Qiang Lyu, Jianlin Cheng
2017 J jnl
DeepSF: deep convolutional neural network for mapping protein sequences to folds.
CoRR
Jie Hou, Badri Adhikari, Jianlin Cheng
2017 J jnl
Improved protein structure reconstruction using secondary structures, contacts at higher distance thresholds, and non-contacts.
BMC Bioinform.
Badri Adhikari, Jianlin Cheng
2017 J jnl
QAcon: single model quality assessment using protein structural and contact information with machine learning techniques.
Bioinform.
Renzhi Cao, Badri Adhikari, Debswapna Bhattacharya, Miao Sun, Jie Hou, Jianlin Cheng
2016 J jnl
ConEVA: a toolbox for comprehensive assessment of protein contacts.
BMC Bioinform.
Badri Adhikari, Jackson Nowotny, Debswapna Bhattacharya, Jie Hou, Jianlin Cheng
2016 J jnl
FRAGSION: ultra-fast protein fragment library generation by IOHMM sampling.
Bioinform.
Debswapna Bhattacharya, Badri Adhikari, Jilong Li, Jianlin Cheng
2015 J jnl
Large-scale model quality assessment for improving protein tertiary structure prediction.
Bioinform.
Renzhi Cao, Debswapna Bhattacharya, Badri Adhikari, Jilong Li, Jianlin Cheng