Ayah Zirikly

44 papers A* 1B 1C 1Misc 7Journal 14Unranked 17
YearRankTypeTitle / Venue / Authors
2026 J jnl
Assessing genetic counseling efficiency with natural language processing.
J. Am. Medical Informatics Assoc.
Michelle H. Nguyen, Carolyn D. Applegate, Brittney Murray, Ayah Zirikly, Crystal Tichnell, Catherine Gordon, Lisa R. Yanek, Cynthia A. James, Casey Overby Taylor
2025 J jnl
CARMA: Comprehensive Automatically-annotated Reddit Mental Health Dataset for Arabic.
CoRR
Saad Mankarious, Ayah Zirikly
2025 J jnl
Detecting Dataset Bias in Medical AI: A Generalized and Modality-Agnostic Auditing Framework.
CoRR
Nathan Drenkow, Mitchell Pavlak, Keith Harrigian, Ayah Zirikly, Adarsh Subbaswamy, Mathias Unberath
2025 J jnl
MindSET: Advancing Mental Health Benchmarking through Large-Scale Social Media Data.
CoRR
Saad Mankarious, Ayah Zirikly, Daniel Wiechmann, Elma Kerz, Edward Kempa, Yu Qiao
2024 — conf
Are Clinical T5 Models Better for Clinical Text?
ML4H@NeurIPS
Yahan Li, Keith Harrigian, Ayah Zirikly, Mark Dredze
2024 J jnl
Are Clinical T5 Models Better for Clinical Text?
CoRR
Yahan Li, Keith Harrigian, Ayah Zirikly, Mark Dredze
2024 J jnl
Taxonomy-based prompt engineering to generate synthetic drug-related patient portal messages.
J. Biomed. Informatics
Natalie Wang, Sukrit Treewaree, Ayah Zirikly, Yuzhi L. Lu, Michelle H. Nguyen, Bhavik Agarwal, Jash Shah, James Michael Stevenson, Casey Overby Taylor
2023 — conf
Characterization of Stigmatizing Language in Medical Records.
ACL (2)
Keith Harrigian, Ayah Zirikly, Brant Chee, Alya Ahmad, Anne Links, Somnath Saha, Mary Catherine Beach, Mark Dredze
2023 J jnl
Editorial: Artificial intelligence for human function and disability.
Frontiers Digit. Health
Denis R. Newman-Griffis, Bart Desmet, Ayah Zirikly, Suzanne Tamang, Chih-Hung Chang
2022 B conf
A Whole-Person Function Dictionary for the Mobility, Self-Care and Domestic Life Domains: a Seedset Expansion Approach.
LREC
Ayah Zirikly, Bart Desmet, Julia Porcino, Jonathan Camacho Maldonado, Pei-Shu Ho, Rafael Jiménez Silva, Maryanne Sacco
2022 Misc conf
Application of Natural Language Processing to Identify Social Needs from The Electronic Health Record's Free-Text Notes.
AMIA
Geoffrey M. Gray, Luis M. Ahumada, Ayah Zirikly, Masoud Rouhizadeh, Thomas Richards, Elham Hatef
2022 — conf
Conference on Health, Inference, and Learning (CHIL) 2022.
CHIL
Gerardo Flores, George H. Chen, Tom J. Pollard, Ayah Zirikly, Michael C. Hughes, Tasmie Sarker, Joyce C. Ho, Tristan Naumann
2022 — conf
Improving the Generalizability of Depression Detection by Leveraging Clinical Questionnaires.
ACL (1)
Thong Nguyen, Andrew Yates, Ayah Zirikly, Bart Desmet, Arman Cohan
2022 J jnl
Improving the Generalizability of Depression Detection by Leveraging Clinical Questionnaires.
CoRR
Thong Nguyen, Andrew Yates, Ayah Zirikly, Bart Desmet, Arman Cohan
2021 J jnl
A comprehensive study of mobility functioning information in clinical notes: Entity hierarchy, corpus annotation, and sequence labeling.
Int. J. Medical Informatics
Thanh Thieu, Jonathan Camacho Maldonado, Pei-Shu Ho, Min Ding, Alex Marr, Diane Brandt, Denis Newman-Griffis, Ayah Zirikly, Leighton Chan, Elizabeth Rasch
2021 J jnl
Ambiguity in medical concept normalization: An analysis of types and coverage in electronic health record datasets.
J. Am. Medical Informatics Assoc.
Denis Newman-Griffis, Guy Divita, Bart Desmet, Ayah Zirikly, Carolyn P. Rosé, Eric Fosler-Lussier
2021 — conf
Machine Learning for Health (ML4H) 2021.
ML4H@NeurIPS
Subhrajit Roy, Stephen Pfohl, Girmaw Abebe Tadesse, Luis Oala, Fabian Falck, Yuyin Zhou, Liyue Shen, Ghada Zamzmi, Purity Mugambi, Ayah Zirikly, Matthew B. A. McDermott, Emily Alsentzer
2021 — ed.
Machine Learning for Health, ML4H@NeurIPS 2021, 04 December 2021, Virtual Event.
ML4H@NeurIPS
Subhrajit Roy, Stephen Pfohl, Emma Rocheteau, Girmaw Abebe Tadesse, Luis Oala, Fabian Falck, Yuyin Zhou, Liyue Shen, Ghada Zamzmi, Purity Mugambi, Ayah Zirikly, Matthew B. A. McDermott, Emily Alsentzer
2021 — ed.
Proceedings of the Second Workshop on Artificial Intelligence for Function, Disability, and Health co-located with the 2021 International Joint Conference on Artificial Intelligence, AI4Function@IJCAI 2021, Online, August 20-21, 2021.
AI4Function@IJCAI
Denis Newman-Griffis, Bart Desmet, Ayah Zirikly, Suzanne Tamang, Hongfang Liu
2021 A* conf
Sparse encoding for more-interpretable feature-selecting representations in probabilistic matrix factorization.
ICLR
Joshua C. Chang, Patrick Fletcher, Jungmin Han, Ted L. Chang, Shashaank Vattikuti, Bart Desmet, Ayah Zirikly, Carson C. Chow
2020 Misc conf
Ambiguity in Medical Concept Normalization: An Analysis of Types and Coverage in Electronic Health Record Datasets.
AMIA
Denis R. Newman-Griffis, Guy Divita, Bart Desmet, Ayah Zirikly, Carolyn P. Rosé, Eric Fosler-Lussier
2020 Misc conf
Angelfish: Building a Structurally Diverse Clinical Document Corpus.
AMIA
Guy Divita, Bart Desmet, Ayah Zirikly, Luke Breitfeller, Carolyn P. Rosé
2020 Misc conf
Curating Annotated Corpora for Functioning Information.
AMIA
Rafael Jiménez Silva, Chunxiao Zhou, Bart Desmet, Ayah Zirikly, Alex Marr, Maryanne Sacco, Pei-Shu Ho, Jonathan Camacho Maldonado, Julia Porcino, Guy Divita, Elizabeth Rasch
2020 — conf
Development of Natural Language Processing Tools to Support Determination of Federal Disability Benefits in the U.S.
LT4Gov@LREC
Bart Desmet, Julia Porcino, Ayah Zirikly, Denis Newman-Griffis, Guy Divita, Elizabeth Rasch
2020 Misc conf
Experiences and Challenges in Manual Annotation of Functioning Information in Medical Records.
AMIA
Jonathan Camacho Maldonado, Pei-Shu Ho, Rafael Jiménez Silva, Alex Marr, Julia Porcino, Maryanne Sacco, Ayah Zirikly, Leighton Chan, Elizabeth Rasch
2020 — ed.
Proceedings of the First Workshop on Artificial Intelligence for Function, Disability, and Health co-located with the 2020 International Joint Conference on Artificial Intelligence - Pacific Rim Conference on Artificial Intelligence (IJCAI-PRICAI 2020), Online, January 7-8, 2021.
AI4Function@IJCAI
Denis Newman-Griffis, Serguei V. S. Pakhomov, Suzanne Tamang, Ayah Zirikly, Bart Desmet, Hongfang Liu, Junichi Tsujii
2020 J jnl
Sparse encoding for more-interpretable feature-selecting representations in probabilistic matrix factorization.
CoRR
Joshua C. Chang, Patrick Fletcher, Jungmin Han, Ted L. Chang, Shashaank Vattikuti, Bart Desmet, Ayah Zirikly, Carson C. Chow
2019 Misc conf
Automated classification of mobility activities in free text clinical narratives.
AMIA
Denis R. Newman-Griffis, Ayah Zirikly, Pei-Shu Ho, Jonathan Camacho Maldonado, Maryanne Sacco, Alex Marr, Albert M. Lai, Eric Fosler-Lussier
2019 Misc conf
Bootstrapping a Mobility Dictionary from a Seed Set.
AMIA
Ayah Zirikly, Denis R. Newman-Griffis, Julia Porcino, Pei-Shu Ho, Jonathan Camacho Maldonado, Maryanne Sacco, Alex Marr
2019 — conf
Classifying the reported ability in clinical mobility descriptions.
BioNLP@ACL
Denis Newman-Griffis, Ayah Zirikly, Guy Divita, Bart Desmet
2019 J jnl
Classifying the reported ability in clinical mobility descriptions.
CoRR
Denis Newman-Griffis, Ayah Zirikly, Guy Divita, Bart Desmet
2018 — conf
Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility.
BioNLP
Denis Newman-Griffis, Ayah Zirikly
2018 J jnl
Embedding Transfer for Low-Resource Medical Named Entity Recognition: A Case Study on Patient Mobility.
CoRR
Denis Newman-Griffis, Ayah Zirikly
2018 — conf
Expert, Crowdsourced, and Machine Assessment of Suicide Risk via Online Postings.
CLPsych@NAACL-HTL
Han-Chin Shing, Suraj Nair, Ayah Zirikly, Meir Friedenberg, Hal Daumé III, Philip Resnik
2018 — conf
RSDD-Time: Temporal Annotation of Self-Reported Mental Health Diagnoses.
CLPsych@NAACL-HTL
Sean MacAvaney, Bart Desmet, Arman Cohan, Luca Soldaini, Andrew Yates, Ayah Zirikly, Nazli Goharian
2018 J jnl
RSDD-Time: Temporal Annotation of Self-Reported Mental Health Diagnoses.
CoRR
Sean MacAvaney, Bart Desmet, Arman Cohan, Luca Soldaini, Andrew Yates, Ayah Zirikly, Nazli Goharian
2016 — conf
The GW/LT3 VarDial 2016 Shared Task System for Dialects and Similar Languages Detection.
VarDial@COLING
Ayah Zirikly, Bart Desmet, Mona T. Diab
2016 — conf
The GW/UMD CLPsych 2016 Shared Task System.
CLPsych@HLT-NAACL
Ayah Zirikly, Varun Kumar, Philip Resnik
2016 — conf
The Power of Language Music: Arabic Lemmatization through Patterns.
CogALex@COLING
Mohammed Attia, Ayah Zirikly, Mona T. Diab
2015 — conf
Cross-lingual Transfer of Named Entity Recognizers without Parallel Corpora.
ACL (2)
Ayah Zirikly
2015 — conf
GWU English TAC-KBP EL Diagnostic Task with Name Mention.
TAC
Ayah Zirikly, Mona T. Diab, Yassine Benajiba
2015 — conf
Named Entity Recognition for Arabic Social Media.
VS@HLT-NAACL
Ayah Zirikly, Mona T. Diab
2014 — conf
Named Entity Recognition System for Dialectal Arabic.
ANLP@EMNLP
Ayah Zirikly, Mona T. Diab
2013 C conf
ANEAR: Automatic Named Entity Aliasing Resolution.
NLDB
Ayah Zirikly, Mona T. Diab