Ashwini Patil

22 papers A 1B 1Misc 1Journal 15Unranked 3
YearRankTypeTitle / Venue / Authors
2023 J jnl
CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.
Nucleic Acids Res.
Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös, Silvio C. E. Tosatto, Damiano Piovesan
2022 J jnl
AI-driven streamlined modeling: experiences and lessons learned from multiple domains.
Softw. Syst. Model.
Sagar Sunkle, Krati Saxena, Ashwini Patil, Vinay Kulkarni
2021 J jnl
FEATS: feature selection-based clustering of single-cell RNA-seq data.
Briefings Bioinform.
Edwin Vans, Ashwini Patil, Alok Sharma
2021 J jnl
Integrated "Generate, Make, and Test" for Formulated Products using Knowledge Graphs.
Data Intell.
Sagar Sunkle, Deepak Jain, Krati Saxena, Ashwini Patil, Tushita Singh, Beena Rai, Vinay Kulkarni
2020 B conf
Checking, Generating, and Revising Safety Data Sheets using Globally Harmonized System Standards.
EDOC
Ashwini Patil, Sagar Sunkle, Vinay Kulkarni
2020 A conf
Information Extraction and Graph Representation for the Design of Formulated Products.
CAiSE
Sagar Sunkle, Krati Saxena, Ashwini Patil, Vinay Kulkarni, Deepak Jain, Rinu Chacko, Beena Rai
2020 — conf
Mining Heterogeneous Data for Formulation Design.
ICDM (Workshops)
Krati Saxena, Ashwini Patil, Sagar Sunkle, Vinay Kulkarni
2019 — conf
Clustering of Small-Sample Single-Cell RNA-Seq Data via Feature Clustering and Selection.
PRICAI (3)
Edwin Vans, Alok Sharma, Ashwini Patil, Daichi Shigemizu, Tatsuhiko Tsunoda
2019 J jnl
Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions.
BMC Bioinform.
Ronesh Sharma, Alok Sharma, Ashwini Patil, Tatsuhiko Tsunoda
2019 — ch.
Protein-Protein Interaction Databases.
Encyclopedia of Bioinformatics and Computational Biology (2)
Ashwini Patil
2018 J jnl
OPAL: prediction of MoRF regions in intrinsically disordered protein sequences.
Bioinform.
Ronesh Sharma, Gaurav Raicar, Tatsuhiko Tsunoda, Ashwini Patil, Alok Sharma
2018 J jnl
TimeXNet Web: identifying cellular response networks from diverse omics time-course data.
Bioinform.
Phit Ling Tan, Yosvany López, Kenta Nakai, Ashwini Patil
2016 J jnl
Predicting MoRFs in protein sequences using HMM profiles.
BMC Bioinform.
Ronesh Sharma, Shiu Kumar, Tatsuhiko Tsunoda, Ashwini Patil, Alok Sharma
2015 J jnl
HitPredict version 4: comprehensive reliability scoring of physical protein-protein interactions from more than 100 species.
Database J. Biol. Databases Curation
Yosvany López, Kenta Nakai, Ashwini Patil
2014 J jnl
TimeXNet: Identifying active gene sub-networks using time-course gene expression profiles.
BMC Syst. Biol.
Ashwini Patil, Kenta Nakai
2013 J jnl
Identification of novel motif patterns to decipher the promoter architecture of co-expressed genes in Arabidopsis thaliana.
BMC Syst. Biol.
Yosvany López, Ashwini Patil, Kenta Nakai
2013 J jnl
Linking Transcriptional Changes over Time in Stimulated Dendritic Cells to Identify Gene Networks Activated during the Innate Immune Response.
PLoS Comput. Biol.
Ashwini Patil, Yutaro Kumagai, Kuo-ching Liang, Yutaka Suzuki, Kenta Nakai
2012 Misc conf
Functional Annotation of Intrinsically Disordered Domains by Their Amino Acid Content Using IDD Navigator.
Pacific Symposium on Biocomputing
Ashwini Patil, Shunsuke Teraguchi, Huy Dinh, Kenta Nakai, Daron M. Standley
2011 — conf
Fault Tolerance in Cluster Computing System.
3PGCIC
Ashwini Patil, Ankit Shah, Sheetal Gaikwad, Akassh A. Mishra, Simranjit Singh Kohli, Sudhir Dhage
2011 J jnl
HitPredict: a database of quality assessed protein-protein interactions in nine species.
Nucleic Acids Res.
Ashwini Patil, Kenta Nakai, Haruki Nakamura
2010 J jnl
Intrinsically disordered domains deviate significantly from random sequences in mammalian proteins.
BMC Bioinform.
Shunsuke Teraguchi, Ashwini Patil, Daron M. Standley
2005 J jnl
Filtering high-throughput protein-protein interaction data using a combination of genomic features.
BMC Bioinform.
Ashwini Patil, Haruki Nakamura