Artur Kadurin

20 papers A* 2B 1Journal 11Unranked 6
YearRankTypeTitle / Venue / Authors
2025 J jnl
AFToolkit: a framework for molecular modeling of proteins with AlphaFold-derived representations.
Briefings Bioinform.
Maria Sindeeva, Alexander Telepov, Nikita Ivanisenko, Tatiana I Shashkova, Kuzma Khrabrov, Artem Tsypin, Artur Kadurin, Olga L. Kardymon
2025 J jnl
LAGNet: better electron density prediction for LCAO-based data and drug-like substances.
J. Cheminformatics
Konstantin Ushenin, Kuzma Khrabrov, Artem Tsypin, Anton Ber, Egor Rumiantsev, Artur Kadurin
2025 J jnl
Measuring Chemical LLM robustness to molecular representations: a SMILES variation-based framework.
J. Cheminformatics
Veronika Ganeeva, Kuzma Khrabrov, Artur Kadurin, Elena Tutubalina
2025 — conf
Two Steps from Hell: Compositionality on Chemical LMs.
EMNLP (Findings)
Veronika Ganeeva, Kuzma Khrabrov, Artur Kadurin, Elena Tutubalina
2024 A* conf
$\nabla^2$DFT: A Universal Quantum Chemistry Dataset of Drug-Like Molecules and a Benchmark for Neural Network Potentials.
NeurIPS
Kuzma Khrabrov, Anton Ber, Artem Tsypin, Konstantin Ushenin, Egor Rumiantsev, Alexander Telepov, Dmitry Protasov, Ilya Shenbin, Anton Alekseev, Mikhail Shirokikh, Sergey I. Nikolenko, Elena Tutubalina, Artur Kadurin
2024 — conf
Biomedical Entity Representation with Graph-Augmented Multi-Objective Transformer.
NAACL-HLT (Findings)
Andrey Sakhovskiy, Natalia Semenova, Artur Kadurin, Elena Tutubalina
2024 — conf
Chemical Language Models Have Problems with Chemistry: A Case Study on Molecule Captioning Task.
Tiny Papers @ ICLR
Veronika Ganeeva, Kuzma Khrabrov, Artur Kadurin, Andrey V. Savchenko, Elena Tutubalina
2024 J jnl
FREED++: Improving RL Agents for Fragment-Based Molecule Generation by Thorough Reproduction.
CoRR
Alexander Telepov, Artem Tsypin, Kuzma Khrabrov, Sergey Yakukhnov, Pavel Strashnov, Petr Zhilyaev, Egor Rumiantsev, Daniel Ezhov, Manvel Avetisian, Olga Popova, Artur Kadurin
2024 A* conf
Gradual Optimization Learning for Conformational Energy Minimization.
ICLR
Artem Tsypin, Leonid Ugadiarov, Kuzma Khrabrov, Alexander Telepov, Egor Rumiantsev, Alexey Skrynnik, Aleksandr Panov, Dmitry P. Vetrov, Elena Tutubalina, Artur Kadurin
2024 — conf
Lost in Translation: Chemical Language Models and the Misunderstanding of Molecule Structures.
EMNLP (Findings)
Veronika Ganeeva, Andrey Sakhovskiy, Kuzma Khrabrov, Andrey V. Savchenko, Artur Kadurin, Elena Tutubalina
2024 J jnl
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CoRR
Kuzma Khrabrov, Anton Ber, Artem Tsypin, Konstantin Ushenin, Egor Rumiantsev, Alexander Telepov, Dmitry Protasov, Ilya Shenbin, Anton Alekseev, Mikhail Shirokikh, Sergey I. Nikolenko, Elena Tutubalina, Artur Kadurin
2023 J jnl
FREED++: Improving RL Agents for Fragment-Based Molecule Generation by Thorough Reproduction.
Trans. Mach. Learn. Res.
Alexander Telepov, Artem Tsypin, Kuzma Khrabrov, Sergey Yakukhnov, Pavel Strashnov, Petr Zhilyaev, Egor Rumiantsev, Daniel Ezhov, Manvel Avetisian, Olga Popova, Artur Kadurin
2023 J jnl
Gradual Optimization Learning for Conformational Energy Minimization.
CoRR
Artem Tsypin, Leonid Ugadiarov, Kuzma Khrabrov, Manvel Avetisian, Alexander Telepov, Egor Rumiantsev, Alexey Skrynnik, Aleksandr I. Panov, Dmitry P. Vetrov, Elena Tutubalina, Artur Kadurin
2023 — conf
Graph-Enriched Biomedical Entity Representation Transformer.
CLEF
Andrey Sakhovskiy, Natalia Semenova, Artur Kadurin, Elena Tutubalina
2023 J jnl
MineralImage5k: A benchmark for zero-shot raw mineral visual recognition and description.
Comput. Geosci.
Sergey Nesteruk, Julia Agafonova, Igor Pavlov, Maxim Gerasimov, Nikolay Latyshev, Denis Dimitrov, Andrey Kuznetsov, Artur Kadurin, Pavel Plechov
2021 — conf
Drug and Disease Interpretation Learning with Biomedical Entity Representation Transformer.
ECIR (1)
Zulfat Miftahutdinov, Artur Kadurin, Roman Kudrin, Elena Tutubalina
2021 J jnl
Drug and Disease Interpretation Learning with Biomedical Entity Representation Transformer.
CoRR
Zulfat Miftahutdinov, Artur Kadurin, Roman Kudrin, Elena Tutubalina
2021 J jnl
Medical concept normalization in clinical trials with drug and disease representation learning.
Bioinform.
Zulfat Miftahutdinov, Artur Kadurin, Roman Kudrin, Elena Tutubalina
2020 B conf
Fair Evaluation in Concept Normalization: a Large-scale Comparative Analysis for BERT-based Models.
COLING
Elena Tutubalina, Artur Kadurin, Zulfat Miftahutdinov
2018 J jnl
Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models.
CoRR
Daniil Polykovskiy, Alexander Zhebrak, Benjamín Sánchez-Lengeling, Sergey Golovanov, Oktai Tatanov, Stanislav Belyaev, Rauf Kurbanov, Aleksey Artamonov, Vladimir Aladinskiy, Mark Veselov, Artur Kadurin, Sergey I. Nikolenko, Alán Aspuru-Guzik, Alex Zhavoronkov