Arnaud Céol

18 papers Journal 17
YearRankTypeTitle / Venue / Authors
2022 J jnl
TMBleR: a bioinformatic tool to optimize TMB estimation and predictive power.
Bioinform.
Laura Fancello, Alessandro Guida, Gianmaria Frige, Arnaud Céol, Gabriele Babini, Giovanni Luca Scaglione, Mario Zanfardino, Tommaso Mazza, Lorenzo Ferrando, Pier Giuseppe Pelicci, Luca Mazzarella
2020 J jnl
Search and comparison of (epi)genomic feature patterns in multiple genome browser tracks.
BMC Bioinform.
Arnaud Céol, Piero Montanari, Ilaria Bartolini, Stefano Ceri, Paolo Ciaccia, Marco Patella, Marco Masseroli
2019 J jnl
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes.
BMC Bioinform.
Paolo Romano, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso
2018 J jnl
Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions.
BMC Bioinform.
M. Sivade Dumousseau, Diego Alonso-López, Mais G. Ammari, Glyn Bradley, Nancy H. Campbell, Arnaud Céol, Gianni Cesareni, Colin W. Combe, Javier De Las Rivas, Noemi del-Toro, Joshua Heimbach, Henning Hermjakob, Igor Jurisica, Maximilian Koch, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit H. M. Meldal, Gos Micklem, Simona Panni, Pablo Porras, Sylvie Ricard-Blum, Bernd Roechert, Lukasz Salwínski, Anjali Shrivastava, Julie M. Sullivan, Nicolas Thierry-Mieg, Yo Yehudi, Kim Van Roey, Sandra E. Orchard
2016 J jnl
Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks.
BMC Bioinform.
Arnaud Céol, Lisette G. G. C. Verhoef, Mark Wade, Heiko Müller
2016 J jnl
LowMACA: exploiting protein family analysis for the identification of rare driver mutations in cancer.
BMC Bioinform.
Giorgio E. M. Melloni, Stefano de Pretis, Laura Riva, Mattia Pelizzola, Arnaud Céol, Jole Costanza, Heiko Müller, Luca Zammataro
2015 J jnl
The MI bundle: enabling network and structural biology in genome visualization tools.
Bioinform.
Arnaud Céol, Heiko Müller
2014 J jnl
3did: a catalog of domain-based interactions of known three-dimensional structure.
Nucleic Acids Res.
Roberto Mosca, Arnaud Céol, Amelie Stein, Roger Olivella, Patrick Aloy
2014 J jnl
AnnotateGenomicRegions: a web application.
BMC Bioinform.
Luca Zammataro, Rita DeMolfetta, Gabriele Bucci, Arnaud Céol, Heiko Müller
2014 J jnl
SMITH: a LIMS for handling next-generation sequencing workflows.
BMC Bioinform.
Francesco Venco, Yuriy Vaskin, Arnaud Céol, Heiko Müller
2012 J jnl
NetAligner - a network alignment server to compare complexes, pathways and whole interactomes.
Nucleic Acids Res.
Roland A. Pache, Arnaud Céol, Patrick Aloy
2011 J jnl
3did: identification and classification of domain-based interactions of known three-dimensional structure.
Nucleic Acids Res.
Amelie Stein, Arnaud Céol, Patrick Aloy
2010 J jnl
MINT, the molecular interaction database: 2009 update.
Nucleic Acids Res.
Arnaud Céol, Andrew Chatr-aryamontri, Luana Licata, Daniele Peluso, Leonardo Briganti, Livia Perfetto, Luisa Castagnoli, Gianni Cesareni
2009 J jnl
VirusMINT: a viral protein interaction database.
Nucleic Acids Res.
Andrew Chatr-aryamontri, Arnaud Céol, Daniele Peluso, Aurelio Nardozza, Simona Panni, Francesca Sacco, Michele Tinti, Alex Smolyar, Luisa Castagnoli, Marc Vidal, Michael E. Cusick, Gianni Cesareni
2008 — —
Integration of protein interaction and protein localization data.
Arnaud Céol
2007 J jnl
DOMINO: a database of domain-peptide interactions.
Nucleic Acids Res.
Arnaud Céol, Andrew Chatr-aryamontri, Elena Santonico, Roberto Sacco, Luisa Castagnoli, Gianni Cesareni
2007 J jnl
MINT: the Molecular INTeraction database.
Nucleic Acids Res.
Andrew Chatr-aryamontri, Arnaud Céol, Luisa Montecchi-Palazzi, Giuliano Nardelli, Maria Victoria Schneider, Luisa Castagnoli, Gianni Cesareni
2005 J jnl
HomoMINT: an inferred human network based on orthology mapping of protein interactions discovered in model organisms.
BMC Bioinform.
Maria Persico, Arnaud Céol, Caius Gavrila, Robert Hoffmann, Arnaldo Florio, Gianni Cesareni