Arnau Montagud

13 papers A 1Journal 10Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
A novel scalable high performance diffusion solver for multiscale cell simulations.
CoRR
Jose-Luis Estragues-Muñoz, Carlos Álvarez, Arnau Montagud, Daniel Jiménez-González, Alfonso Valencia
2023 — conf
Lessons Learned from a Performance Analysis and Optimization of a Multiscale Cellular Simulation.
PASC
Marc Clascà, Marta Garcia-Gasulla, Arnau Montagud, José Carbonell-Caballero, Alfonso Valencia
2023 J jnl
Lessons learned from a performance analysis and optimization of a multiscale cellular simulation.
CoRR
Marc Clascà, Marta Garcia-Gasulla, Arnau Montagud, José Carbonell-Caballero, Alfonso Valencia
2023 J jnl
Multiscale model of the different modes of cancer cell invasion.
Bioinform.
Marco Ruscone, Arnau Montagud, Philippe Chavrier, Olivier Destaing, Isabelle Bonnet, Andrei Yu. Zinovyev, Emmanuel Barillot, Vincent Noël, Laurence Calzone
2022 J jnl
Parallel model exploration for tumor treatment simulations.
Comput. Intell.
Charilaos Akasiadis, Miguel Ponce de Leon, Arnau Montagud, Evangelos Michelioudakis, Alexia Atsidakou, Elias Alevizos, Alexander Artikis, Alfonso Valencia, Georgios Paliouras
2021 — conf
BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems.
CMSB
Gaurav Saxena, Miguel Ponce de Leon, Arnau Montagud, David Vicente Dorca, Alfonso Valencia
2021 J jnl
Parallel Model Exploration for Tumor Treatment Simulations.
CoRR
Charilaos Akasiadis, Miguel Ponce de Leon, Arnau Montagud, Evangelos Michelioudakis, Alexia Atsidakou, Elias Alevizos, Alexander Artikis, Alfonso Valencia, Georgios Paliouras
2020 A conf
INforE: Interactive Cross-platform Analytics for Everyone.
CIKM
Nikos Giatrakos, David Arnu, Theodoros Bitsakis, Antonios Deligiannakis, Minos N. Garofalakis, Ralf Klinkenberg, Aris Konidaris, Antonis Kontaxakis, Yannis Kotidis, Vasilis Samoladas, Alkis Simitsis, George Stamatakis, Fabian Temme, Mate Torok, Edwin Yaqub, Arnau Montagud, Miguel Ponce de Leon, Holger Arndt, Stefan Burkard
2019 J jnl
Conceptual and computational framework for logical modelling of biological networks deregulated in diseases.
Briefings Bioinform.
Arnau Montagud, Pauline Traynard, Loredana Martignetti, Eric Bonnet, Emmanuel Barillot, Andrei Yu. Zinovyev, Laurence Calzone
2019 J jnl
PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling.
Bioinform.
Gaëlle Letort, Arnau Montagud, Gautier Stoll, Randy W. Heiland, Emmanuel Barillot, Paul Macklin, Andrei Yu. Zinovyev, Laurence Calzone
2014 J jnl
New Approach for Phylogenetic Tree Recovery Based on Genome-Scale Metabolic Networks.
J. Comput. Biol.
Daniel Gamermann, Arnau Montagud, J. Alberto Conejero, Javier F. Urchueguía, Pedro Fernández de Córdoba
2012 J jnl
Automation on the Generation of Genome-Scale Metabolic Models.
J. Comput. Biol.
R. Reyes, Daniel Gamermann, Arnau Montagud, David Fuente, Julián Triana, Javier F. Urchueguía Schölzel, Pedro Fernández de Córdoba
2010 J jnl
Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium.
BMC Syst. Biol.
Arnau Montagud, Emilio Navarro, Pedro Fernández de Córdoba, Javier F. Urchueguía, Kiran Raosaheb Patil